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13_1_20cm_3_scaffold_166

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_166_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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20..229
DNA (210bp) protein (70aa)
Cold-shock protein DNA-binding protein {ECO:0000313|EMBL:AHG88036.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Cold-shock protein DNA-binding protein
Cold-shock DNA-binding domain protein id=3399190 bin=GWC2_Proteo_65_14_Ab886 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
13_1_20cm_3_scaffold_166_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

421..1278
DNA (858bp) protein (286aa)
Probable DNA repair protein Cflav_PD3749 n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XGI1_9BACT
Non-homologous end joining protein Ku {ECO:0000256|HAMAP-Rule:MF_01875}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
DNA repair protein
13_1_20cm_3_scaffold_166_3
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1288..4083
DNA (2796bp) protein (932aa)
DNA ligase D n=1 Tax=Geobacter sp. (strain M21) RepID=C6E8Q6_GEOSM
DNA ligase D {ECO:0000313|EMBL:AEV97946.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM
DNA ligase D
13_1_20cm_3_scaffold_166_4
unknown

Not on your lists

comp(4090..4398)
DNA (309bp) protein (103aa)

This feature has no annotations

13_1_20cm_3_scaffold_166_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(4449..5108)
DNA (660bp) protein (220aa)
NUDIX hydrolase n=1 Tax=Clostridium sp. CAG:967 RepID=R5K8T3_9CLOT
NUDIX family hydrolase {ECO:0000313|EMBL:AHG88039.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
NUDIX family hydrolase
13_1_20cm_3_scaffold_166_6
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(5308..7095)
DNA (1788bp) protein (596aa)
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmat
beta-N-acetylhexosaminidase (EC:3.2.1.52)
Beta-N-acetylhexosaminidase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A778_GEMAT
13_1_20cm_3_scaffold_166_7
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(7098..7379)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4P9_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:BAH37209.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
hypothetical protein
13_1_20cm_3_scaffold_166_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(7385..8134)
DNA (750bp) protein (250aa)
Putative fatty acid desaturase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4P8_GEMAT
Fatty acid desaturase {ECO:0000313|EMBL:AHG88041.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
fatty acid desaturase
13_1_20cm_3_scaffold_166_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(8209..10152)
DNA (1944bp) protein (648aa)
Peptidase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0ME75_RHOM4
Peptidase {ECO:0000313|EMBL:AHG88043.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
peptidase
13_1_20cm_3_scaffold_166_10
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

10281..11453
DNA (1173bp) protein (391aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
NADP-dependent oxidoreductase domain protein
Predicted protein id=2216088 bin=GWA2_Methylomirabilis_73_35 species=Physcomitrella patens genus=Physcomitrella taxon_order=Funariales taxon_class=Bryopsida phylum=Streptophyta tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_20cm_3_scaffold_166_11
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

11457..12461
DNA (1005bp) protein (335aa)
Phospholipase n=1 Tax=Alcanivorax sp. PN-3 RepID=U7HK61_9GAMM
Zn-dependent hydrolase {ECO:0000313|EMBL:AHG88047.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Zn-dependent hydrolase
13_1_20cm_3_scaffold_166_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(12954..13793)
DNA (840bp) protein (280aa)
Putative esterase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4P7_GEMAT
Putative esterase {ECO:0000313|EMBL:AHG88054.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
putative esterase
13_1_20cm_3_scaffold_166_13
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(13800..14519)
DNA (720bp) protein (240aa)
transcriptional regulator n=1 Tax=Desulfovibrio desulfuricans RepID=UPI0003781AF3
Cyclic nucleotide-binding protein {ECO:0000313|EMBL:AHG88056.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
cyclic nucleotide-binding protein
13_1_20cm_3_scaffold_166_14
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(14610..16706)
DNA (2097bp) protein (699aa)
Glutamate carboxypeptidase II n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4P5_GEMAT
Peptidase M28 {ECO:0000313|EMBL:AHG88926.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
peptidase M28
13_1_20cm_3_scaffold_166_15
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(16731..17351)
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4P4_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:BAH37204.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
hypothetical protein
13_1_20cm_3_scaffold_166_16
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(17338..18930)
DNA (1593bp) protein (531aa)
Putative phosphatase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4P3_GEMAT
Type I phosphodiesterase/nucleotide pyrophosphatase {ECO:0000313|EMBL:AHG88965.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
type I phosphodiesterase/nucleotide pyrophosphatase
13_1_20cm_3_scaffold_166_17
unknown

Not on your lists

comp(18984..19469)
DNA (486bp) protein (162aa)

This feature has no annotations

13_1_20cm_3_scaffold_166_18
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(19535..20752)
DNA (1218bp) protein (406aa)
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107};; TaxID=861299 species="Bacteria; Gemm
Acetylornithine aminotransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4P1_GEMAT
Acetylornithine/succinyldiaminopimelate aminotransferase
13_1_20cm_3_scaffold_166_19
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(20749..21420)
DNA (672bp) protein (224aa)
Acetylglutamate kinase {ECO:0000256|HAMAP-Rule:MF_00082, ECO:0000256|SAAS:SAAS00245375}; EC=2.7.2.8 {ECO:0000256|HAMAP-Rule:MF_00082, ECO:0000256|SAAS:SAAS00245383};; N-acetyl-L-glutamate 5-phosphotra
argB; acetylglutamate kinase (EC:2.7.2.8)
Acetylglutamate kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4P0_GEMAT
13_1_20cm_3_scaffold_166_20
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(21420..22391)
DNA (972bp) protein (324aa)
N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00015955}; Short=AGPR {ECO:0000256|HAMAP-Rule:MF_00150};; EC=1.2.1.38 {ECO:0000256|HAMAP-Rule:MF_0015
N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4N9_GEMAT
N-acetyl-gamma-glutamyl-phosphate reductase
13_1_20cm_3_scaffold_166_21
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

22479..22937
DNA (459bp) protein (153aa)
Arginine repressor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4N8_GEMAT
Arginine repressor {ECO:0000256|HAMAP-Rule:MF_00173}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Arginine repressor
13_1_20cm_3_scaffold_166_22
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

23006..24271
DNA (1266bp) protein (422aa)
Argininosuccinate synthase {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00013047}; EC=6.3.4.5 {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00009947};; Citrulline--aspartate ligase
Argininosuccinate synthase n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EKP6_9CHLR
Argininosuccinate synthase
13_1_20cm_3_scaffold_166_23
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

24285..25715
DNA (1431bp) protein (477aa)
Argininosuccinate lyase {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211019}; Short=ASAL {ECO:0000256|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:S
Argininosuccinate lyase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4N7_GEMAT
Argininosuccinate lyase
13_1_20cm_3_scaffold_166_24
unknown

Not on your lists

comp(25772..26320)
DNA (549bp) protein (183aa)

This feature has no annotations

13_1_20cm_3_scaffold_166_25
unknown

Not on your lists

26465..26857
DNA (393bp) protein (131aa)

This feature has no annotations

13_1_20cm_3_scaffold_166_26
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(26897..27106)
DNA (210bp) protein (70aa)
Cold shock protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9Q1_GEMAT
Cold-shock protein DNA-binding protein {ECO:0000313|EMBL:AHG88837.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Cold-shock protein DNA-binding protein
13_1_20cm_3_scaffold_166_27
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(27289..27723)
DNA (435bp) protein (145aa)
Putative uncharacterized protein n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GEF5_GEOUR
Uncharacterized protein {ECO:0000313|EMBL:AHG88835.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein
13_1_20cm_3_scaffold_166_28
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

27911..29062
DNA (1152bp) protein (384aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159}; EC=1.17.7.1 {ECO:0000256|SAAS:SAAS00088795};; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159};; 1-hyd
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4N0_GEMAT
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
13_1_20cm_3_scaffold_166_29
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(29069..29677)
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4M7_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:BAH37187.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
hypothetical protein
13_1_20cm_3_scaffold_166_30
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29674..30168)
DNA (495bp) protein (165aa)
GAF domain-containing proteins n=2 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08QS0_STIAD
Uncharacterized protein {ECO:0000313|EMBL:EYF00896.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondrom
hypothetical protein
Displaying items 1-30 of 45 in total

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