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13_1_20cm_3_scaffold_2039

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Displaying items 1-30 of 34 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_2039_1
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

2..1024
DNA (1023bp) protein (341aa)
General secretory pathway protein E n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6III7_9FIRM
general secretory pathway protein E; K02652 type IV pilus assembly protein PilB Tax=RBG_16_Gemmatimonadetes_66_8_curated
NUDIX hydrolase
13_1_20cm_3_scaffold_2039_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(1021..1857)
DNA (837bp) protein (279aa)
Putative acetyltransferase n=1 Tax=Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1) RepID=F2NNT5_MARHT
Acetyltransferase {ECO:0000313|EMBL:AHG91398.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
acetyltransferase
13_1_20cm_3_scaffold_2039_3
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(1878..2525)
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB50_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:BAH39456.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
hypothetical protein
13_1_20cm_3_scaffold_2039_4
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(2522..3142)
DNA (621bp) protein (207aa)
Probable GTP-binding protein EngB n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=ENGB_GEMAT
Probable GTP-binding protein EngB {ECO:0000255|HAMAP-Rule:MF_00321}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas auranti
engB; putative GTP-binding protein EngB
13_1_20cm_3_scaffold_2039_5
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(3143..5230)
DNA (2088bp) protein (696aa)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HA
lon; ATP-dependent Lon protease (EC:3.4.21.53)
Lon protease n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB48_GEMAT
13_1_20cm_3_scaffold_2039_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(5553..6797)
DNA (1245bp) protein (415aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB47_GEMAT
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacte
ATP-dependent Clp protease ATP-binding subunit clpX
13_1_20cm_3_scaffold_2039_7
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(6946..7320)
DNA (375bp) protein (125aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopep
clpP; ATP-dependent Clp protease proteolytic subunit (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB46_GEMAT
13_1_20cm_3_scaffold_2039_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(7296..7526)
DNA (231bp) protein (77aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444};; Endopeptidase Clp {ECO:0000256|HAMAP-R
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB46_GEMAT
ATP-dependent Clp protease proteolytic subunit
13_1_20cm_3_scaffold_2039_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(7519..8766)
DNA (1248bp) protein (416aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-Rule:MF_00303}; TaxID=861299 spe
Trigger factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB45_GEMAT
Trigger factor
13_1_20cm_3_scaffold_2039_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

8896..9384
DNA (489bp) protein (163aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C540A
Uncharacterized protein {ECO:0000313|EMBL:AHG92649.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
protein of unknown function DUF892
13_1_20cm_3_scaffold_2039_11
unknown

Not on your lists

comp(9511..9681)
DNA (171bp) protein (57aa)

This feature has no annotations

13_1_20cm_3_scaffold_2039_trna_1
unknown

Not on your lists

comp(9713..9794)
DNA (82bp)
transferRNA
13_1_20cm_3_scaffold_2039_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(9924..11492)
DNA (1569bp) protein (523aa)
Putative S1 family peptidase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB13_GEMAT
PDZ/DHR/GLGF domain protein {ECO:0000313|EMBL:AHG91386.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PDZ/DHR/GLGF domain protein
13_1_20cm_3_scaffold_2039_13
unknown

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11970..12521
DNA (552bp) protein (184aa)

This feature has no annotations

13_1_20cm_3_scaffold_2039_14
unknown

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12518..13168
DNA (651bp) protein (217aa)

This feature has no annotations

13_1_20cm_3_scaffold_2039_15
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

13573..14001
DNA (429bp) protein (143aa)
Uncharacterized protein {ECO:0000313|EMBL:AHG89663.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_20cm_3_scaffold_2039_16
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

14111..15091
DNA (981bp) protein (327aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A762_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:BAH38072.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
diguanylate cyclase
13_1_20cm_3_scaffold_2039_17
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

15227..15928
DNA (702bp) protein (234aa)
Tetratricopeptide TPR_1 repeat-containing protein n=1 Tax=Leptolyngbya sp. PCC 7376 RepID=K9PXQ8_9CYAN
Metal dependent phosphohydrolase {ECO:0000313|EMBL:AHG91260.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
metal dependent phosphohydrolase
13_1_20cm_3_scaffold_2039_18
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

16008..16484
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A762_GEMAT
Diguanylate cyclase {ECO:0000313|EMBL:AHG89111.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
diguanylate cyclase
13_1_20cm_3_scaffold_2039_19
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

16794..17486
DNA (693bp) protein (231aa)
Uncharacterized protein {ECO:0000313|EMBL:AHG89109.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein
13_1_20cm_3_scaffold_2039_20
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

17570..18592
DNA (1023bp) protein (341aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A762_GEMAT
Diguanylate cyclase {ECO:0000313|EMBL:AHG89111.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
diguanylate cyclase
13_1_20cm_3_scaffold_2039_21
Caldithrix abyssi, Caldithrix, Bacteria

Not on your lists

18762..19808
DNA (1047bp) protein (349aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XY16_9BACT
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:EHO40891.1}; TaxID=880073 species="Bacteria; Caldithrix.;" source="Caldithrix abyssi DSM 13497.;"
two component, sigma54 specific, Fis family transcriptional regulator
13_1_20cm_3_scaffold_2039_22
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

19805..21457
DNA (1653bp) protein (551aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A762_GEMAT
Diguanylate cyclase {ECO:0000313|EMBL:AHG89111.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
diguanylate cyclase
13_1_20cm_3_scaffold_2039_23
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

21713..23053
DNA (1341bp) protein (447aa)
Putative ABC transporter substrate binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A765_GEMAT
ABC-type transporter, periplasmic subunit {ECO:0000313|EMBL:AHG90220.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
ABC-type transporter, periplasmic subunit
13_1_20cm_3_scaffold_2039_24
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(23155..25026)
DNA (1872bp) protein (624aa)
Chaperone protein DnaK n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB12_GEMAT
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP
Chaperone protein dnaK
13_1_20cm_3_scaffold_2039_25
Myxococcus sp. (contaminant ex DSM 436), Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25224..25970
DNA (747bp) protein (249aa)
Rhomboid family serine protease n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2U0A3_9DELT
Rhomboid family serine protease {ECO:0000313|EMBL:ERK88218.1}; TaxID=1297742 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source
S54 family peptidase
13_1_20cm_3_scaffold_2039_26
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

26027..26638
DNA (612bp) protein (204aa)
Putative Pit accessory protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB10_GEMAT
Putative phosphate transport regulator {ECO:0000313|EMBL:AHG91383.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Putative phosphate transport regulator
13_1_20cm_3_scaffold_2039_27
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

26638..27705
DNA (1068bp) protein (356aa)
Low-affinity inorganic phosphate transporter n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB09_GEMAT
Low-affinity inorganic phosphate transporter {ECO:0000313|EMBL:BAH39415.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas
pit; low-affinity inorganic phosphate transporter
13_1_20cm_3_scaffold_2039_28
unknown

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comp(27702..28871)
DNA (1170bp) protein (390aa)

This feature has no annotations

13_1_20cm_3_scaffold_2039_29
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

29074..29547
DNA (474bp) protein (158aa)
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAG7_GEMAT
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
RNA polymerase sigma factor, sigma-70 family
Displaying items 1-30 of 34 in total

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