ggKbase home page

13_1_20cm_3_scaffold_2068

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_2068_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(10..1020)
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GJV1_SORC5
Uncharacterized protein {ECO:0000313|EMBL:AHG92498.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Protein of unknown function DUF2891
13_1_20cm_3_scaffold_2068_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(1017..1973)
DNA (957bp) protein (319aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ACC5_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:AHG92497.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
protein of unknown function DUF979
13_1_20cm_3_scaffold_2068_3
Burkholderia sp. Ch1-1, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1970..2653)
DNA (684bp) protein (228aa)
Putative membrane protein n=1 Tax=Burkholderia sp. Ch1-1 RepID=I2IV11_9BURK rbh
Putative membrane protein {ECO:0000313|EMBL:EIF34563.1}; Flags: Precursor;; TaxID=243261 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" sourc
hypothetical protein rbh
13_1_20cm_3_scaffold_2068_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(2733..5483)
DNA (2751bp) protein (917aa)
Putative membrane associated hydrolase {ECO:0000313|EMBL:AHG92520.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
putative membrane associated hydrolase
Putative membrane associated hydrolase id=3650229 bin=GWA2_Ignavibacteriae_54_16_partial species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteriae_54_16_partial organism_group=Ignavibacteria
13_1_20cm_3_scaffold_2068_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

5651..6586
DNA (936bp) protein (312aa)
Pyridoxal-5'-phosphate-dependent protein beta subunit n=1 Tax=Acidobacterium sp. (strain MP5ACTX9) RepID=E8X0E9_ACISM
Pyridoxal-5'-phosphate-dependent protein beta subunit {ECO:0000313|EMBL:AHG93672.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Pyridoxal-5'-phosphate-dependent protein beta subunit
13_1_20cm_3_scaffold_2068_6
RBG_13_OP8X_37_8_curated, OP8X, Bacteria

Not on your lists

comp(6435..8009)
DNA (1575bp) protein (525aa)
hypothetical protein Tax=RBG_13_OP8X_37_8_curated
13_1_20cm_3_scaffold_2068_7
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(8107..10665)
DNA (2559bp) protein (853aa)
Putative uncharacterized protein n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XWI0_9BACT
membrane associated hydrolase Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
13_1_20cm_3_scaffold_2068_8
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10733..11680)
DNA (948bp) protein (316aa)
Putative membrane protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VUL0_9GAMM
Putative membrane protein {ECO:0000313|EMBL:EIL90901.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter
blaR1 peptidase M56 family protein
13_1_20cm_3_scaffold_2068_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(11677..12051)
DNA (375bp) protein (125aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000372B64C
Penicillinase repressor {ECO:0000313|EMBL:AHG92031.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Penicillinase repressor
13_1_20cm_3_scaffold_2068_trna_1
unknown

Not on your lists

comp(12181..12252)
DNA (72bp)
transferRNA
13_1_20cm_3_scaffold_2068_10
Crinalium epipsammum, Crinalium, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(12265..12792)
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Crinalium epipsammum PCC 9333 RepID=K9W4M6_9CYAN
Uncharacterized protein {ECO:0000313|EMBL:AFZ15141.1}; TaxID=1173022 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Crinalium.;" source="Crinalium epipsammum PCC 9333.;"
hypothetical protein
13_1_20cm_3_scaffold_2068_11
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(12789..13952)
DNA (1164bp) protein (388aa)
40-residue YVTN family beta-propeller repeat protein n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GN45_9BACT
Phosphoesterase {ECO:0000313|EMBL:AHG93065.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
phosphoesterase
13_1_20cm_3_scaffold_2068_12
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

15262..15765
DNA (504bp) protein (168aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
N-acetyltransferase ats1 id=2466389 bin=GWC2_Ignavibacteria_56_12 species=Legionella pneumophila genus=Legionella taxon_order=Legionellales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
Acetyltransferase (GNAT) family
13_1_20cm_3_scaffold_2068_13
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(15786..16469)
DNA (684bp) protein (228aa)
Endonuclease III {ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|PIRNR:PIRNR001435};; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; F
Endonuclease III n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XRV4_9BACT
DNA-(apurinic or apyrimidinic site) lyase
13_1_20cm_3_scaffold_2068_14
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(16782..19049)
DNA (2268bp) protein (756aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEM3_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:BAH40950.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
hypothetical protein
13_1_20cm_3_scaffold_2068_15
RBG_13_Planctomycetes_62_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

19202..19999
DNA (798bp) protein (266aa)
membrane-associated phospholipid phosphatase (EC:3.1.3.27) Tax=RBG_13_Planctomycetes_62_9_curated
Membrane-associated phospholipid phosphatase n=1 Tax=Rivularia sp. PCC 7116 RepID=K9RKD4_9CYAN
membrane-associated phospholipid phosphatase
13_1_20cm_3_scaffold_2068_16
unknown

Not on your lists

comp(19920..20312)
DNA (393bp) protein (131aa)

This feature has no annotations

13_1_20cm_3_scaffold_2068_17
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(20734..21039)
DNA (306bp) protein (102aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG87971.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_20cm_3_scaffold_2068_18
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(21167..21859)
DNA (693bp) protein (231aa)
Glutamine synthetase {ECO:0000256|RuleBase:RU004356}; EC=6.3.1.2 {ECO:0000256|RuleBase:RU004356};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Glutamine synthetase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4T4_GEMAT
glutamine synthetase, type I
Displaying 19 items

View Taxonomy