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13_1_20cm_3_scaffold_2360

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_2360_1
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(1..633)
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4I0_GEMAT
hypothetical protein; K05807 putative lipoprotein Tax=GWC2_Gemmatimonadetes_71_10_curated
outer membrane assembly lipoprotein YfiO
13_1_20cm_3_scaffold_2360_2
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(699..1622)
DNA (924bp) protein (308aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_20cm_3_scaffold_2360_3
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(1619..2443)
DNA (825bp) protein (275aa)
TPR repeat-containing protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8J5H8_ANAD2
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_20cm_3_scaffold_2360_4
GWD2_Desulfuromonadales_61_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2427..2972)
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Fusarium pseudograminearum (strain CS3096) RepID=K3VQC7_FUSPC
NAD-dependent epimerase/dehydratase Tax=GWD2_Desulfuromonadales_61_12_curated
NAD-dependent epimerase/dehydratase
13_1_20cm_3_scaffold_2360_5
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(3243..4175)
DNA (933bp) protein (311aa)
NAD-dependent epimerase/dehydratase family protein; K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] Tax=GWC2_Gemmatimonadetes_71_10_curated
NAD-dependent epimerase/dehydratase n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NRU8_ROSCS
NAD-dependent epimerase/dehydratase
13_1_20cm_3_scaffold_2360_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(4160..5479)
DNA (1320bp) protein (440aa)
nucleotide sugar dehydrogenase (EC:1.1.1.22); K00012 UDPglucose 6-dehydrogenase [EC:1.1.1.22] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Nucleotide sugar dehydrogenase n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XXK5_9BACT
nucleotide sugar dehydrogenase
13_1_20cm_3_scaffold_2360_7
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(5476..6795)
DNA (1320bp) protein (440aa)
UDP-N-acetyl-D-mannosaminuronate dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5W5_GEMAT
nucleotide-sugar dehydrogenase Tax=GWC2_Gemmatimonadetes_71_10_curated
nucleotide sugar dehydrogenase
13_1_20cm_3_scaffold_2360_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(6792..7796)
DNA (1005bp) protein (335aa)
Oxidoreductase domain protein n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NXC2_GRAMM id=5225809 bin=16ft_combo_ws3_JS1 species=Granulicella mallensis genus=Granulicella taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
oxidoreductase domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
oxidoreductase domain-containing protein
13_1_20cm_3_scaffold_2360_9
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(7793..8935)
DNA (1143bp) protein (381aa)
Aminotransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4I2_GEMAT
aminotransferase Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
DegT/DnrJ/EryC1/StrS aminotransferase
13_1_20cm_3_scaffold_2360_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(8940..9530)
DNA (591bp) protein (197aa)
Transferase hexapeptide repeat n=1 Tax=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) RepID=B5YCQ8_DICT6
transferase hexapeptide repeat containing protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
transferase hexapeptide repeat
13_1_20cm_3_scaffold_2360_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(9531..13730)
DNA (4200bp) protein (1400aa)
carB; carbamoyl-phosphate synthase large chain (EC:6.3.5.5); K01955 carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Carbamoyl-phosphate synthase large chain n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=CARB_GEMAT rbh
Carbamoyl-phosphate synthase large subunit glutamine-dependent
13_1_20cm_3_scaffold_2360_12
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(13714..14682)
DNA (969bp) protein (323aa)
Putative GDP-6-deoxy-D-lyxo-4-hexulose reductase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4I6_GEMAT
putative GDP-6-deoxy-D-lyxo-4-hexulose reductase Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
putative GDP-6-deoxy-D-lyxo-4-hexulose reductase
13_1_20cm_3_scaffold_2360_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(14679..15713)
DNA (1035bp) protein (345aa)
gmd; GDP-mannose 4,6-dehydratase (EC:4.2.1.47); K01711 GDPmannose 4,6-dehydratase [EC:4.2.1.47] Tax=RBG_16_Gemmatimonadetes_66_8_curated
gmd; GDP-mannose 4,6-dehydratase (EC:4.2.1.47)
GDP-mannose 4,6-dehydratase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4I7_GEMAT
13_1_20cm_3_scaffold_2360_14
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists


15734..15925
DNA (192bp) protein (64aa)
50S ribosomal protein L28 n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=RL28_GEODF
rpmB; 50S ribosomal protein L28; K02902 large subunit ribosomal protein L28 Tax=RBG_16_Gemmatimonadetes_66_8_curated
rpmB; 50S ribosomal protein L28
13_1_20cm_3_scaffold_2360_15
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists


comp(15981..16337)
DNA (357bp) protein (119aa)
50S ribosomal protein L17 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RL17_GEMAT
rplQ; 50S ribosomal protein L17; K02879 large subunit ribosomal protein L17 Tax=RBG_16_Gemmatimonadetes_66_8_curated
50S ribosomal protein L17
13_1_20cm_3_scaffold_2360_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(16337..17395)
DNA (1059bp) protein (353aa)
rpoA; DNA-directed RNA polymerase alpha subunit (EC:2.7.7.6); K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
DNA-directed RNA polymerase subunit alpha n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4J0_GEMAT
DNA-directed RNA polymerase subunit alpha
13_1_20cm_3_scaffold_2360_17
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists


comp(17392..17487)
DNA (96bp) protein (32aa)
rpsD; 30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Displaying 17 items

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