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13_1_20cm_3_scaffold_251

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Displaying 29 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_251_1
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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2..589
DNA (588bp) protein (196aa)
Chromosomal replication initiator protein DnaA n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3G6_GEMAT
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377, ECO:0000256|SAAS:SAAS00009621}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae;
dnaA; chromosomal replication initiator protein DnaA
13_1_20cm_3_scaffold_251_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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789..1901
DNA (1113bp) protein (371aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=861299 species="Bacter
DNA polymerase III subunit beta n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3G7_GEMAT
DNA polymerase III, beta subunit
13_1_20cm_3_scaffold_251_3
unknown

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comp(1898..2800)
DNA (903bp) protein (301aa)

This feature has no annotations

13_1_20cm_3_scaffold_251_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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3342..4238
DNA (897bp) protein (299aa)
AraC family transcriptional regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3G9_GEMAT
Helix-turn-helix, AraC domain-containing protein {ECO:0000313|EMBL:AHG88679.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Helix-turn-helix, AraC domain-containing protein
13_1_20cm_3_scaffold_251_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(4228..4785)
DNA (558bp) protein (186aa)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216328}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=
Orotate phosphoribosyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3H2_GEMAT
Orotate phosphoribosyltransferase
13_1_20cm_3_scaffold_251_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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4822..5766
DNA (945bp) protein (315aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Sensory box histidine kinase n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U2L1_MYXSD
ATP-binding region ATPase domain protein
13_1_20cm_3_scaffold_251_7
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(5746..6654)
DNA (909bp) protein (303aa)
Putative serine/threonine protein kinase {ECO:0000313|EMBL:BAH37050.1}; EC=2.7.11.1 {ECO:0000313|EMBL:BAH37050.1};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadacea
putative serine/threonine protein kinase (EC:2.7.11.1)
Putative serine/threonine protein kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3H3_GEMAT
13_1_20cm_3_scaffold_251_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

6705..8087
DNA (1383bp) protein (461aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3H4_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:AHG88685.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein
13_1_20cm_3_scaffold_251_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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8166..11111
DNA (2946bp) protein (982aa)
DNA polymerase I n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3H5_GEMAT rbh
DNA polymerase I {ECO:0000313|EMBL:AHG88688.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
DNA polymerase I
13_1_20cm_3_scaffold_251_10
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(11116..12090)
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3H8_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:BAH37055.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
hypothetical protein
13_1_20cm_3_scaffold_251_11
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(12087..13556)
DNA (1470bp) protein (490aa)
major facilitator transporter; K06902 MFS transporter, UMF1 family Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Major facilitator superfamily MFS_1 id=1250800 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
major facilitator transporter
13_1_20cm_3_scaffold_251_12
unknown

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13652..14602
DNA (951bp) protein (317aa)

This feature has no annotations

13_1_20cm_3_scaffold_251_13
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(14599..15369)
DNA (771bp) protein (257aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=861299 species="Bacteria
Putative GTP cyclohydrolase 1 type 2 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3J0_GEMAT
NGG1p interacting factor 3 protein, NIF3
13_1_20cm_3_scaffold_251_14
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(15477..16115)
DNA (639bp) protein (213aa)
Chromosome partitioning protein ParB n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3J2_GEMAT
ParB-like partition protein {ECO:0000313|EMBL:AHG88704.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
parB-like partition protein
13_1_20cm_3_scaffold_251_15
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(16272..17060)
DNA (789bp) protein (263aa)
Chromosome partitioning protein ParA n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3J3_GEMAT
Cobyrinic acid ac-diamide synthase {ECO:0000313|EMBL:AHG88702.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Cobyrinic acid ac-diamide synthase
13_1_20cm_3_scaffold_251_16
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(17156..17869)
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3J4_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:AHG88701.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
protein of unknown function DUF541
13_1_20cm_3_scaffold_251_17
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(17921..18904)
DNA (984bp) protein (328aa)
K+ channel, inward rectifier n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IM86_KORVE
K+ channel, inward rectifier {ECO:0000313|EMBL:ABF42014.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (
K+ channel protein
13_1_20cm_3_scaffold_251_18
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

19022..19915
DNA (894bp) protein (298aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAE9_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:AHG91884.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
protein of unknown function DUF6 transmembrane
13_1_20cm_3_scaffold_251_19
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(19905..21836)
DNA (1932bp) protein (644aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3J5_GEMAT
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=861299 species="Bacter
tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG
13_1_20cm_3_scaffold_251_20
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(21949..22491)
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3J8_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:AHG88696.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein
13_1_20cm_3_scaffold_251_21
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(22539..23450)
DNA (912bp) protein (304aa)
Carboxymethylenebutenolidase (EC:3.1.1.45)
Carboxymethylenebutenolidase n=1 Tax=Tolumonas auensis (strain DSM 9187 / TA4) RepID=C4LFJ7_TOLAT
penicillin-binding protein, beta-lactamase class C Tax=RBG_16_Acidobacteria_70_10_curated
13_1_20cm_3_scaffold_251_22
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(23450..24472)
DNA (1023bp) protein (341aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3J9_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:AHG88720.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein
13_1_20cm_3_scaffold_251_23
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

24625..24882
DNA (258bp) protein (86aa)
ArsC family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3K3_GEMAT
ArsC family protein Tax=GWC2_Gemmatimonadetes_71_10_curated
arsenate reductase like protein
13_1_20cm_3_scaffold_251_24
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

24970..26577
DNA (1608bp) protein (536aa)
D-3-phosphoglycerate dehydrogenase {ECO:0000313|EMBL:BAH37237.1}; EC=1.1.1.95 {ECO:0000313|EMBL:BAH37237.1};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gem
serA; D-3-phosphoglycerate dehydrogenase (EC:1.1.1.95)
D-3-phosphoglycerate dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4S7_GEMAT
13_1_20cm_3_scaffold_251_25
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

26604..27941
DNA (1338bp) protein (446aa)
FAD linked oxidase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4S6_GEMAT
FAD linked oxidase {ECO:0000313|EMBL:BAH37236.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 /
FAD linked oxidase
13_1_20cm_3_scaffold_251_26
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

27938..28582
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4S5_GEMAT
HAD-superfamily hydrolase, subfamily IB (PSPase-like) {ECO:0000313|EMBL:AHG89216.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
HAD-superfamily hydrolase, subfamily IB (PSPase-like)
13_1_20cm_3_scaffold_251_27
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

28579..29676
DNA (1098bp) protein (366aa)
Transaminase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4S4_GEMAT rbh
Transaminase {ECO:0000313|EMBL:BAH37234.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14
transaminase
13_1_20cm_3_scaffold_251_28
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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29640..31547
DNA (1908bp) protein (636aa)
Putative ABC transporter ATP-binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3L4_GEMAT
putative ABC transporter ATP-binding protein; K06158 ATP-binding cassette, subfamily F, member 3 Tax=GWC2_Gemmatimonadetes_71_10_curated
ABC transporter related protein
13_1_20cm_3_scaffold_251_29
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(31553..32314)
DNA (762bp) protein (254aa)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-ace
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4L0_GEMAT
UDP-N-acetylenolpyruvoylglucosamine reductase
Displaying 29 items

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