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13_1_20cm_3_scaffold_2882

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_2882_1
RBG_16_Archaea_50_20_curated, Archaea

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2..478
DNA (477bp) protein (159aa)
DNA topoisomerase I; K03168 DNA topoisomerase I [EC:5.99.1.2] Tax=RBG_16_Archaea_50_20_curated
topA; DNA topoisomerase I (topA) (EC:5.99.1.2); K03168 DNA topoisomerase I [EC:5.99.1.2] id=18248581 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
topA; DNA topoisomerase IA (EC:5.99.1.2)
13_1_20cm_3_scaffold_2882_2
unknown

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comp(443..877)
DNA (435bp) protein (145aa)

This feature has no annotations

13_1_20cm_3_scaffold_2882_3
RBG_16_Archaea_50_20_curated, Archaea

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936..1436
DNA (501bp) protein (167aa)
agmatinase; K01480 agmatinase [EC:3.5.3.11] Tax=RBG_16_Archaea_50_20_curated
agmatinase (EC:3.5.3.11)
hypothetical protein n=1 Tax=crenarchaeote SCGC AAA261-N23 RepID=UPI0003678AFB
13_1_20cm_3_scaffold_2882_4
GWB2_Deltaproteobacteria_55_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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1728..2900
DNA (1173bp) protein (391aa)
hypothetical protein Tax=GWB2_Deltaproteobacteria_55_19_curated
Aminotransferase class I and II id=2009528 bin=GWB2_Proteobacteria_55_19 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
hypothetical protein
13_1_20cm_3_scaffold_2882_5
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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comp(3203..3916)
DNA (714bp) protein (238aa)
DNA primase small subunit n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3S1T6_FERPA
DNA primase small subunit Tax=RBG_16_Bathyarchaeota_48_13_curated
DNA primase small subunit
13_1_20cm_3_scaffold_2882_6
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(3953..5737)
DNA (1785bp) protein (595aa)
DNA ligase n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HLI2_ACIS0 rbh
ATP-dependent DNA ligase I Tax=RBG_13_Bathyarchaeota_38_9_curated
ATP-dependent DNA ligase I
13_1_20cm_3_scaffold_2882_7
unknown

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5820..6341
DNA (522bp) protein (174aa)

This feature has no annotations

13_1_20cm_3_scaffold_2882_8
RBG_16_Archaea_50_20_curated, Archaea

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6401..6937
DNA (537bp) protein (179aa)
hypothetical protein n=1 Tax=unclassified Crenarchaeota (miscellaneous) RepID=UPI0003727633
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
13_1_20cm_3_scaffold_2882_9

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comp(6934..7473)
DNA (540bp) protein (180aa)
Metal dependent phosphohydrolase {ECO:0000313|EMBL:AIF13093.1}; TaxID=1456211 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_59_E10.;"
metal dependent phosphohydrolase; K07023 putative hydrolases of HD superfamily id=14428258 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
Metal dependent phosphohydrolase
13_1_20cm_3_scaffold_2882_10
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

7725..8231
DNA (507bp) protein (169aa)
Putative uncharacterized protein n=1 Tax=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) RepID=A3DN66_STAMF
Marine sediment metagenome DNA, contig: S06H3_L03387 Tax=RBG_13_Bathyarchaeota_38_9_curated
hypothetical protein
13_1_20cm_3_scaffold_2882_11
unknown

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comp(8122..8400)
DNA (279bp) protein (93aa)

This feature has no annotations

13_1_20cm_3_scaffold_2882_12
unknown

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8887..9414
DNA (528bp) protein (176aa)

This feature has no annotations

13_1_20cm_3_scaffold_2882_13
unknown

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9657..10040
DNA (384bp) protein (128aa)

This feature has no annotations

13_1_20cm_3_scaffold_2882_14
RBG_16_Bathyarchaeota_57_9_curated, Bathyarchaeota, Archaea

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comp(10067..10630)
DNA (564bp) protein (188aa)
cytidyltransferase (EC:2.7.7.3) Tax=RBG_16_Bathyarchaeota_57_9_curated
phosphopantetheine adenylyltransferase (EC:2.7.7.3)
Phosphopantetheine adenylyltransferase n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N639_9ARCH
13_1_20cm_3_scaffold_2882_15
unknown

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comp(10974..11096)
DNA (123bp) protein (41aa)

This feature has no annotations

13_1_20cm_3_scaffold_2882_trna_1
unknown

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comp(11217..11352)
DNA (136bp)
transferRNA
13_1_20cm_3_scaffold_2882_16
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

11443..12165
DNA (723bp) protein (241aa)
Transcription initiation factor IIB n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7U4W7_9ARCH
transcription factor TFIIB cyclin-related protein; K03124 transcription initiation factor TFIIB Tax=RBG_13_Bathyarchaeota_38_9_curated
tfb; transcription initiation factor IIB
Displaying 17 items

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