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13_1_20cm_3_scaffold_300

Search features with annotation key words

Displaying 28 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_300_1
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(1..465)
DNA (465bp) protein (155aa)
2-isopropylmalate synthase {ECO:0000313|EMBL:ABF41919.1}; EC=2.3.3.13 {ECO:0000313|EMBL:ABF41919.1};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Kor
2-isopropylmalate synthase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IMI1_KORVE
2-isopropylmalate synthase
13_1_20cm_3_scaffold_300_2
Granulicella tundricola, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

605..1522
DNA (918bp) protein (306aa)
LysR family transcriptional regulator n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B3517D
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ADW69778.1}; TaxID=1198114 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella tundrico
LysR family transcriptional regulator
13_1_20cm_3_scaffold_300_3
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

1725..3926
DNA (2202bp) protein (734aa)
TonB-dependent receptor n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INW6_KORVE
Outer membrane receptor protein {ECO:0000313|EMBL:CDM66992.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
TonB-dependent receptor
13_1_20cm_3_scaffold_300_4
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

4020..4397
DNA (378bp) protein (126aa)
Response regulator receiver protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IIK9_KORVE
Response regulator receiver protein {ECO:0000313|EMBL:ABF43291.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versa
response regulator receiver protein
13_1_20cm_3_scaffold_300_5
unknown

Not on your lists

comp(4401..4634)
DNA (234bp) protein (78aa)

This feature has no annotations

13_1_20cm_3_scaffold_300_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(4656..4997)
DNA (342bp) protein (114aa)
hypothetical protein n=1 Tax=unclassified Latescibacteria RepID=UPI00037894FC
gas vesicle protein G Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
gas vesicle protein G
13_1_20cm_3_scaffold_300_7
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(5067..5969)
DNA (903bp) protein (301aa)
Gas vesicle synthesis GvpLGvpF n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INZ8_KORVE
Gas vesicle synthesis GvpLGvpF {ECO:0000313|EMBL:ABF41402.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis
gas vesicle synthesis GvpLGvpF
13_1_20cm_3_scaffold_300_8
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(5998..8103)
DNA (2106bp) protein (702aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacte
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INZ6_KORVE rbh
PAS/PAC sensor signal transduction histidine kinase
13_1_20cm_3_scaffold_300_9
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(8169..8471)
DNA (303bp) protein (101aa)
Gas vesicle structural protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=GVPA_KORVE
Gas vesicle structural protein {ECO:0000255|HAMAP-Rule:MF_00576}; Short=GVP {ECO:0000255|HAMAP-Rule:MF_00576};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Cand
gas vesicle protein GvpA
13_1_20cm_3_scaffold_300_10
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(8503..8844)
DNA (342bp) protein (114aa)
Gas vesicle structural protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INZ4_KORVE
Gas vesicle structural protein {ECO:0000256|RuleBase:RU000632}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatil
gas vesicle protein GvpA
13_1_20cm_3_scaffold_300_11
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(9077..9412)
DNA (336bp) protein (112aa)
Gas vesicle K n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INZ3_KORVE
Gas vesicle K {ECO:0000313|EMBL:ABF41407.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345
gas vesicle K
13_1_20cm_3_scaffold_300_12
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(9437..10075)
DNA (639bp) protein (213aa)
Gas vesicle synthesis GvpLGvpF n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INZ2_KORVE
Gas vesicle synthesis GvpLGvpF {ECO:0000313|EMBL:ABF41408.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis
gas vesicle synthesis GvpLGvpF
13_1_20cm_3_scaffold_300_13
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(10117..11412)
DNA (1296bp) protein (432aa)
Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component alpha subunit {ECO:0000313|EMBL:CDM66807.1}; EC=1.2.4.4 {ECO:0000313|EMBL:CDM66807.1};; TaxID=454194 species="Bacteria; Acidobact
pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type subunit alpha (EC:1.2.4.1)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000378E2E1 rbh
13_1_20cm_3_scaffold_300_14
GWF2_Elusimicrobia_62_30_curated, Elusimicrobia, Bacteria

Not on your lists

11518..11958
DNA (441bp) protein (147aa)
protein-S-isoprenylcysteine methyltransferase (EC:2.1.1.100)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00035F4E68
hypothetical protein Tax=GWF2_Elusimicrobia_62_30_curated
13_1_20cm_3_scaffold_300_15
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(11965..12792)
DNA (828bp) protein (276aa)
Octanoyltransferase {ECO:0000255|HAMAP-Rule:MF_00013}; EC=2.3.1.181 {ECO:0000255|HAMAP-Rule:MF_00013};; Lipoate-protein ligase B {ECO:0000255|HAMAP-Rule:MF_00013}; Lipoyl/octanoyl transferase {ECO:000
Octanoyltransferase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=LIPB_KORVE rbh
lipoate-protein ligase B
13_1_20cm_3_scaffold_300_16

Not on your lists

comp(12860..13078)
DNA (219bp) protein (73aa)
hypothetical protein n=1 Tax=Cloacimonetes bacterium SCGC AAA252-N05 RepID=UPI000380E976
Marine sediment metagenome DNA, contig: S03H2_L02933 {ECO:0000313|EMBL:GAH35372.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
hypothetical protein
13_1_20cm_3_scaffold_300_17
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(13286..14701)
DNA (1416bp) protein (472aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus
Dihydrolipoyl dehydrogenase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IIJ6_KORVE rbh
dihydrolipoamide dehydrogenase
13_1_20cm_3_scaffold_300_18
unknown

Not on your lists

comp(15037..15480)
DNA (444bp) protein (148aa)

This feature has no annotations

13_1_20cm_3_scaffold_300_19
unknown

Not on your lists

15718..15858
DNA (141bp) protein (47aa)

This feature has no annotations

13_1_20cm_3_scaffold_300_20
RIFOXYC12_FULL_Lentisphaerae_60_16_curated, Lentisphaerae, Bacteria

Not on your lists

16172..17212
DNA (1041bp) protein (347aa)
Marine sediment metagenome DNA, contig: S01H4_S03841 Tax=RIFOXYC12_FULL_Lentisphaerae_60_16_curated
13_1_20cm_3_scaffold_300_21
RIFOXYC12_FULL_Lentisphaerae_60_16_curated, Lentisphaerae, Bacteria

Not on your lists

17228..18331
DNA (1104bp) protein (368aa)
Marine sediment metagenome DNA, contig: S12H4_S03651 Tax=RIFOXYC12_FULL_Lentisphaerae_60_16_curated
13_1_20cm_3_scaffold_300_22
unknown

Not on your lists

18466..18789
DNA (324bp) protein (108aa)
hypothetical protein
13_1_20cm_3_scaffold_300_23
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(18831..19883)
DNA (1053bp) protein (351aa)
Quinoprotein glucose dehydrogenase {ECO:0000313|EMBL:ABJ82177.1}; EC=1.1.5.2 {ECO:0000313|EMBL:ABJ82177.1};; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibactera
quinoprotein glucose dehydrogenase (EC:1.1.5.2)
Quinoprotein glucose dehydrogenase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q029U9_SOLUE
13_1_20cm_3_scaffold_300_24
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(19825..20739)
DNA (915bp) protein (305aa)
Quinoprotein glucose dehydrogenase {ECO:0000313|EMBL:ABJ82177.1}; EC=1.1.5.2 {ECO:0000313|EMBL:ABJ82177.1};; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibactera
quinoprotein glucose dehydrogenase (EC:1.1.5.2)
Quinoprotein glucose dehydrogenase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q029U9_SOLUE
13_1_20cm_3_scaffold_300_25
unknown

Not on your lists

20958..21551
DNA (594bp) protein (198aa)

This feature has no annotations

13_1_20cm_3_scaffold_300_26
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21708..22571)
DNA (864bp) protein (288aa)
hypothetical protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI0003702B01
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF48685.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
13_1_20cm_3_scaffold_300_27
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

22887..23612
DNA (726bp) protein (242aa)
Zinc/iron transporter n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ILQ3_KORVE rbh
Zinc/iron transporter {ECO:0000313|EMBL:ABF42197.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain
zinc/iron transporter
13_1_20cm_3_scaffold_300_28
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(23704..24435)
DNA (732bp) protein (244aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IKN8_KORVE
Uncharacterized protein {ECO:0000313|EMBL:ABF42562.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacte
hypothetical protein
Displaying 28 items

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