ggKbase home page

13_1_20cm_3_scaffold_3006

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_3006_1
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

2..463
DNA (462bp) protein (154aa)
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:BAH37597.1}; EC=1.3.99.- {ECO:0000313|EMBL:BAH37597.1};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;"
acyl-CoA dehydrogenase (EC:1.3.99.-)
Acyl-CoA dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5T7_GEMAT
13_1_20cm_3_scaffold_3006_2
unknown

Not on your lists

478..750
DNA (273bp) protein (91aa)

This feature has no annotations

13_1_20cm_3_scaffold_3006_3
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

1579..1851
DNA (273bp) protein (91aa)
kynurenine--oxoglutarate transaminase (EC:2.6.1.7); K10907 aminotransferase [EC:2.6.1.-] Tax=RBG_16_Gemmatimonadetes_66_8_curated
aminotransferase class I/II n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B73522
aminotransferase class I and II
13_1_20cm_3_scaffold_3006_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(1820..3307)
DNA (1488bp) protein (496aa)
putative serine/threonine protein kinase (EC:2.7.11.1) Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative serine/threonine protein kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AD13_GEMAT
protein kinase
13_1_20cm_3_scaffold_3006_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(3431..5350)
DNA (1920bp) protein (640aa)
putative serine/threonine protein kinase (EC:2.7.11.1) Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative serine/threonine protein kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AD13_GEMAT
protein kinase
13_1_20cm_3_scaffold_3006_6
unknown

Not on your lists

comp(5568..5735)
DNA (168bp) protein (56aa)

This feature has no annotations

13_1_20cm_3_scaffold_3006_7
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6267..6599)
DNA (333bp) protein (111aa)
Uncharacterized protein {ECO:0000313|EMBL:KFC72789.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
13_1_20cm_3_scaffold_3006_8
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

7146..7601
DNA (456bp) protein (152aa)
Putative oligopeptide transporter, OPT family n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LI45_CHLTF
Putative oligopeptide transporter, OPT family {ECO:0000313|EMBL:AEP11261.1}; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacter
putative oligopeptide transporter, OPT family
13_1_20cm_3_scaffold_3006_9
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

7650..8534
DNA (885bp) protein (295aa)
Periplasmic binding protein n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ARA8_RUBXD
Periplasmic binding protein {ECO:0000313|EMBL:ABG06070.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Ru
periplasmic binding protein
13_1_20cm_3_scaffold_3006_10
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

8563..9534
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GHG3_SORC5
hypothetical protein; K07282 poly-gamma-glutamate synthesis protein (capsule biosynthesis protein) Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_1_20cm_3_scaffold_3006_11
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

9531..10601
DNA (1071bp) protein (357aa)
Peptidase M42 family protein n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NFY1_ROSCS rbh
Peptidase M42 family protein {ECO:0000313|EMBL:ABU56365.1}; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexu
peptidase M42 family protein
13_1_20cm_3_scaffold_3006_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(10611..12416)
DNA (1806bp) protein (602aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5S1_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:AHG89986.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein
13_1_20cm_3_scaffold_3006_13
RBG_13_Chloroflexi_66_10_curated, Chloroflexi, Bacteria

Not on your lists

comp(12430..13269)
DNA (840bp) protein (280aa)
ABC transporter related n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UYV5_ROSS1
cobalt ABC transporter ATP-binding protein; K02006 cobalt/nickel transport system ATP-binding protein Tax=RBG_13_Chloroflexi_66_10_curated
ABC transporter-like protein
13_1_20cm_3_scaffold_3006_14
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(13260..14060)
DNA (801bp) protein (267aa)
ABC transporter related n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NS79_ROSCS
ABC transporter; K02006 cobalt/nickel transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
ABC transporter-like protein
13_1_20cm_3_scaffold_3006_15
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(14057..14821)
DNA (765bp) protein (255aa)
Cobalt transport protein n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AUT4_RUBXD
cobalt transport protein; K02008 cobalt/nickel transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
cobalt transport protein
13_1_20cm_3_scaffold_3006_16
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(14818..15387)
DNA (570bp) protein (190aa)
Signal transduction histidine kinase, LytS n=1 Tax=Arthrobacter sp. (strain FB24) RepID=A0JVH5_ARTS2
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
signal transduction histidine kinase LytS
13_1_20cm_3_scaffold_3006_17
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

15432..15839
DNA (408bp) protein (136aa)
Putative GAF sensor protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HH02_ANADF
putative GAF sensor protein; K07170 GAF domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
putative GAF sensor protein
Displaying 17 items

View Taxonomy