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13_1_20cm_3_scaffold_3274

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Displaying items 1-30 of 32 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_3274_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(1..408)
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Salsuginibacillus kocurii RepID=UPI000372F575
Gas vesicle protein GVPa {ECO:0000313|EMBL:AHG88477.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_20cm_3_scaffold_3274_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(405..1205)
DNA (801bp) protein (267aa)
Putative gas vesicle synthesis protein GvpL n=1 Tax=Rhodococcus opacus (strain B4) RepID=C1ARA5_RHOOB
Gas vesicle synthesis GvpLGvpF {ECO:0000313|EMBL:AHG88478.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Gas vesicle synthesis GvpLGvpF
13_1_20cm_3_scaffold_3274_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(1221..1523)
DNA (303bp) protein (101aa)
Gas vesicle G n=1 Tax=Desulforudis audaxviator (strain MP104C) RepID=B1I4U1_DESAP
Gas vesicle G {ECO:0000313|EMBL:AHG88480.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
gas vesicle G
13_1_20cm_3_scaffold_3274_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(1540..2304)
DNA (765bp) protein (255aa)
Gas vesicle synthesis GvpLGvpF n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INZ8_KORVE
Gas vesicle synthesis GvpLGvpF {ECO:0000313|EMBL:AHG88481.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Gas vesicle synthesis GvpLGvpF
13_1_20cm_3_scaffold_3274_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(2326..2817)
DNA (492bp) protein (164aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6T8_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:AHG92231.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
protein of unknown function DUF456
13_1_20cm_3_scaffold_3274_6
unknown

Not on your lists

comp(2817..3476)
DNA (660bp) protein (220aa)

This feature has no annotations

13_1_20cm_3_scaffold_3274_7
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(3866..4831)
DNA (966bp) protein (322aa)
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965};; Tryptophanyl-tRNA synthetase {EC
Tryptophan--tRNA ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6T3_GEMAT
Tryptophan-tRNA ligase, bacterial-type
13_1_20cm_3_scaffold_3274_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

4862..5695
DNA (834bp) protein (278aa)
Inositol monophosphatase n=1 Tax=Methylomonas methanica (strain MC09) RepID=F9ZYK2_METMM
Inositol monophosphatase {ECO:0000313|EMBL:AHG90335.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
inositol monophosphatase
13_1_20cm_3_scaffold_3274_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

5696..7222
DNA (1527bp) protein (509aa)
Formiminotransferase-cyclodeaminase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6T1_GEMAT rbh
Glutamate formiminotransferase {ECO:0000313|EMBL:AHG90334.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
glutamate formiminotransferase
13_1_20cm_3_scaffold_3274_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(7266..7820)
DNA (555bp) protein (185aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974
Methionine aminopeptidase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6S7_GEMAT
methionine aminopeptidase, type I
13_1_20cm_3_scaffold_3274_11
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(7984..8619)
DNA (636bp) protein (212aa)
Adenylate kinase {ECO:0000255|HAMAP-Rule:MF_00235}; Short=AK {ECO:0000255|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000255|HAMAP-Rule:MF_00235};; ATP-AMP transphosphorylase {ECO:0000255|HAMAP-Rule:MF_00
adk; adenylate kinase (EC:2.7.4.3)
Adenylate kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=KAD_GEMAT
13_1_20cm_3_scaffold_3274_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists


comp(8673..10004)
DNA (1332bp) protein (444aa)
Protein translocase subunit SecY n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6S5_GEMAT rbh
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Protein translocase subunit SecY
13_1_20cm_3_scaffold_3274_13
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists


comp(10005..10511)
DNA (507bp) protein (169aa)
50S ribosomal protein L15 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6S4_GEMAT
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" sourc
rplO; 50S ribosomal protein L15
13_1_20cm_3_scaffold_3274_14
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists


comp(10515..10766)
DNA (252bp) protein (84aa)
50S ribosomal protein L30 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6S3_GEMAT
50S ribosomal protein L30 {ECO:0000256|SAAS:SAAS00082687}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
ribosomal protein L30
13_1_20cm_3_scaffold_3274_15
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists


comp(10759..11556)
DNA (798bp) protein (266aa)
30S ribosomal protein S5 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6S2_GEMAT rbh
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
ribosomal protein S5
13_1_20cm_3_scaffold_3274_16
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists


comp(11560..11916)
DNA (357bp) protein (119aa)
50S ribosomal protein L18 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6S1_GEMAT
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
ribosomal protein L18
13_1_20cm_3_scaffold_3274_17
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists


comp(11916..12455)
DNA (540bp) protein (180aa)
50S ribosomal protein L6 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RL6_GEMAT
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Ribosomal protein L6, subgroup
13_1_20cm_3_scaffold_3274_18
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists


comp(12471..12872)
DNA (402bp) protein (134aa)
30S ribosomal protein S8 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6R9_GEMAT
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
ribosomal protein S8
13_1_20cm_3_scaffold_3274_19
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists


comp(12928..13113)
DNA (186bp) protein (62aa)
30S ribosomal protein S14 type Z n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0LHN9_9BACT
rpsN; 30S ribosomal protein S14; K02954 small subunit ribosomal protein S14 Tax=RBG_16_Gemmatimonadetes_66_8_curated
rpsNA; ribosomal protein S14
13_1_20cm_3_scaffold_3274_20
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists


comp(13141..13797)
DNA (657bp) protein (219aa)
50S ribosomal protein L5 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6R7_GEMAT
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Ribosomal protein L5
13_1_20cm_3_scaffold_3274_21
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists


comp(13812..14027)
DNA (216bp) protein (72aa)
50S ribosomal protein L24 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6R6_GEMAT
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (str
rplX; 50S ribosomal protein L24
13_1_20cm_3_scaffold_3274_22
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists


comp(14166..14534)
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RL14_GEMAT
50S ribosomal protein L14 {ECO:0000255|HAMAP-Rule:MF_01367}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (str
rplN; 50S ribosomal protein L14
13_1_20cm_3_scaffold_3274_23
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists


comp(14547..14834)
DNA (288bp) protein (96aa)
30S ribosomal protein S17 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6R4_GEMAT
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Ribosomal protein S17
13_1_20cm_3_scaffold_3274_24
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists


comp(14835..15134)
DNA (300bp) protein (100aa)
50S ribosomal protein L29 n=1 Tax=Peptostreptococcaceae bacterium oral taxon 113 str. W5053 RepID=U2JTF3_9FIRM
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
50S ribosomal protein L29
13_1_20cm_3_scaffold_3274_25
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists


comp(15124..15552)
DNA (429bp) protein (143aa)
50S ribosomal protein L16 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RL16_GEMAT
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
50S ribosomal protein L16
13_1_20cm_3_scaffold_3274_26
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists


comp(15566..16225)
DNA (660bp) protein (220aa)
30S ribosomal protein S3 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RS3_GEMAT
rpsC; 30S ribosomal protein S3; K02982 small subunit ribosomal protein S3 Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
rpsC; 30S ribosomal protein S3
13_1_20cm_3_scaffold_3274_27
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists


comp(16225..16704)
DNA (480bp) protein (160aa)
50S ribosomal protein L22 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6R0_GEMAT
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" sourc
rplV; 50S ribosomal protein L22
13_1_20cm_3_scaffold_3274_28
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists


comp(16701..17054)
DNA (354bp) protein (118aa)
30S ribosomal protein S19 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RS19_GEMAT
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
ribosomal protein S19
13_1_20cm_3_scaffold_3274_29
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists


comp(17082..17912)
DNA (831bp) protein (277aa)
50S ribosomal protein L2 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RL2_GEMAT
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
ribosomal protein L2
13_1_20cm_3_scaffold_3274_30
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists


comp(17916..18203)
DNA (288bp) protein (96aa)
50S ribosomal protein L23 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6Q7_GEMAT
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Ribosomal protein L25/L23
Displaying items 1-30 of 32 in total

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