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13_1_20cm_3_scaffold_343

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_343_1
unknown

Not on your lists

3..1484
DNA (1482bp) protein (494aa)

This feature has no annotations

13_1_20cm_3_scaffold_343_2
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(1495..1923)
DNA (429bp) protein (143aa)
N utilization substance protein B homolog n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=NUSB_KORVE
N utilization substance protein B homolog {ECO:0000255|HAMAP-Rule:MF_00073}; Short=Protein NusB {ECO:0000255|HAMAP-Rule:MF_00073};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Aci
NusB antitermination factor
13_1_20cm_3_scaffold_343_3
Terriglobus saanensis, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(2007..2792)
DNA (786bp) protein (262aa)
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|RuleBase:RU003795, ECO:0000256|SAAS:SAAS00106234}; EC=2.5.1.78 {ECO:0000256|RuleBase:RU003795, ECO:0000256|SAAS:SAAS00106234};; TaxID=401053 specie
6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8V3X8_TERSS
6,7-dimethyl-8-ribityllumazine synthase
13_1_20cm_3_scaffold_343_4
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(2829..3137)
DNA (309bp) protein (103aa)
Short chain enoyl-CoA hydratase {ECO:0000313|EMBL:ABF40215.1}; EC=4.2.1.17 {ECO:0000313|EMBL:ABF40215.1};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatu
Short chain enoyl-CoA hydratase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ISD5_KORVE
short chain enoyl-CoA hydratase
13_1_20cm_3_scaffold_343_5
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(3106..3561)
DNA (456bp) protein (152aa)
Short chain enoyl-CoA hydratase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ISD5_KORVE
paaG; Enoyl-CoA hydratase Tax=RBG_16_Ignavibacteria_34_14_curated
short chain enoyl-CoA hydratase
13_1_20cm_3_scaffold_343_6
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(3783..4676)
DNA (894bp) protein (298aa)
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:ABF40214.1}; EC=1.1.1.35 {ECO:0000313|EMBL:ABF40214.1};; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobact
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ISD6_KORVE
3-hydroxyacyl-CoA dehydrogenase
13_1_20cm_3_scaffold_343_7
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(4888..6141)
DNA (1254bp) protein (418aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
acetyl-CoA acetyltransferase (EC:2.3.1.9)
Acetyl-CoA acetyltransferase n=1 Tax=uncultured marine group II euryarchaeote EF100_57A08 RepID=A9QP30_9EURY id=5224563 bin=16ft_combo_ws3_JS1 species=uncultured marine group II euryarchaeote EF100_57A08 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Euryarchaeota tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
13_1_20cm_3_scaffold_343_8
unknown

Not on your lists

6163..6264
DNA (102bp) protein (34aa)

This feature has no annotations

13_1_20cm_3_scaffold_343_9
unknown

Not on your lists

6277..6735
DNA (459bp) protein (153aa)

This feature has no annotations

13_1_20cm_3_scaffold_343_10
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

6984..7901
DNA (918bp) protein (306aa)
Putative 10 TMS drug/metabolite exporter, DME family, DMT superfamily n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJF6_KORVE
Putative 10 TMS drug/metabolite exporter, DME family, DMT superfamily {ECO:0000313|EMBL:ABF42994.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Kori
DMT family permease
13_1_20cm_3_scaffold_343_11
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8008..8820
DNA (813bp) protein (271aa)
S54 (rhomboid) family peptidase (EC:3.4.21.-)
Rhomboid-like protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C51F3
Rhomboid family protein {ECO:0000313|EMBL:AKF07463.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandara
13_1_20cm_3_scaffold_343_12
Terriglobus saanensis, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(8825..9484)
DNA (660bp) protein (220aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B48F1C
Uncharacterized protein {ECO:0000313|EMBL:ADV84175.1}; Flags: Precursor;; TaxID=401053 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus saanens
hypothetical protein
13_1_20cm_3_scaffold_343_13
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

9636..11063
DNA (1428bp) protein (476aa)
Peptidase M28 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IHI6_KORVE
Peptidase M28 {ECO:0000313|EMBL:ABF43664.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345
peptidase M28
13_1_20cm_3_scaffold_343_14
Terriglobus saanensis, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

11108..11938
DNA (831bp) protein (277aa)
Rhomboid family protein n=1 Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8V317_TERSS
Rhomboid family protein {ECO:0000313|EMBL:ADV81292.1}; TaxID=401053 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus saanensis (strain ATCC BAA
rhomboid family protein
13_1_20cm_3_scaffold_343_15
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(12108..12824)
DNA (717bp) protein (239aa)
Uridylate kinase {ECO:0000255|HAMAP-Rule:MF_01220}; Short=UK {ECO:0000255|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000255|HAMAP-Rule:MF_01220};; Uridine monophosphate kinase {ECO:0000255|HAMAP-Rule:MF
Uridylate kinase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=PYRH_KORVE
pyrH; uridylate kinase
13_1_20cm_3_scaffold_343_16
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(12955..13593)
DNA (639bp) protein (213aa)
Elongation factor Ts n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=EFTS_KORVE
Elongation factor Ts {ECO:0000255|HAMAP-Rule:MF_00050}; Short=EF-Ts {ECO:0000255|HAMAP-Rule:MF_00050};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus K
tsf; elongation factor Ts
13_1_20cm_3_scaffold_343_17
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists


comp(13849..14778)
DNA (930bp) protein (310aa)
30S ribosomal protein S2 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=RS2_KORVE
30S ribosomal protein S2 {ECO:0000255|HAMAP-Rule:MF_00291}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (
rpsB; 30S ribosomal protein S2
13_1_20cm_3_scaffold_343_18
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists


comp(15058..15498)
DNA (441bp) protein (147aa)
30S ribosomal protein S9 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IU83_KORVE
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;"
30S ribosomal protein S9
13_1_20cm_3_scaffold_343_19
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists


comp(15575..16006)
DNA (432bp) protein (144aa)
50S ribosomal protein L13 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=RL13_KORVE
50S ribosomal protein L13 {ECO:0000255|HAMAP-Rule:MF_01366}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis
rplM; 50S ribosomal protein L13
13_1_20cm_3_scaffold_343_20
unknown

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comp(16171..16434)
DNA (264bp) protein (88aa)

This feature has no annotations

13_1_20cm_3_scaffold_343_21
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

16557..17549
DNA (993bp) protein (331aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IHG4_KORVE
Uncharacterized protein {ECO:0000313|EMBL:ABF43686.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacte
hypothetical protein
13_1_20cm_3_scaffold_343_22
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

17847..18425
DNA (579bp) protein (193aa)
Cytochrome c biogenesis protein, transmembrane n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IVB5_KORVE
Cytochrome c biogenesis protein, transmembrane {ECO:0000313|EMBL:ABF39185.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Korib
cytochrome c biogenesis transmembrane protein
13_1_20cm_3_scaffold_343_23
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

18435..18980
DNA (546bp) protein (182aa)
Alkyl hydroperoxide reductase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IVB4_KORVE
Alkyl hydroperoxide reductase {ECO:0000313|EMBL:ABF39186.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Kor
alkyl hydroperoxide reductase
13_1_20cm_3_scaffold_343_24
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

18980..19516
DNA (537bp) protein (179aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IVB3_KORVE
Uncharacterized protein {ECO:0000313|EMBL:ABF39187.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacte
hypothetical protein
13_1_20cm_3_scaffold_343_25
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(19590..21086)
DNA (1497bp) protein (499aa)
Glutamate--tRNA ligase 2 {ECO:0000255|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000255|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase 2 {ECO:0000255|HAMAP-Rule:MF_00022}; Short=GluRS 2 {ECO:0000255|HAM
Glutamate--tRNA ligase 2 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=SYE2_KORVE rbh
glutamyl-tRNA synthetase
13_1_20cm_3_scaffold_343_26
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

21292..24693
DNA (3402bp) protein (1134aa)
Diguanylate cyclase with GAF sensor n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IVB0_KORVE rbh
Diguanylate cyclase with GAF sensor {ECO:0000313|EMBL:ABF39190.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" sourc
GAF sensor-containing diguanylate cyclase
13_1_20cm_3_scaffold_343_27
Granulicella tundricola, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

24865..26097
DNA (1233bp) protein (411aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00036115DA
Uncharacterized protein {ECO:0000313|EMBL:ADW67434.1}; Flags: Precursor;; TaxID=1198114 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella tund
hypothetical protein
13_1_20cm_3_scaffold_343_28
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

26174..26872
DNA (699bp) protein (233aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IVH3_KORVE
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ABF39127.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter v
short-chain dehydrogenase/reductase SDR
13_1_20cm_3_scaffold_343_29
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

26924..27742
DNA (819bp) protein (273aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IVH2_KORVE
Uncharacterized protein {ECO:0000313|EMBL:ABF39128.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacte
hypothetical protein
13_1_20cm_3_scaffold_343_30
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

28046..28834
DNA (789bp) protein (263aa)
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase {ECO:0000256|HAMAP-Rule:MF_00388, ECO:0000256|SAAS:SAAS00041388}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_00388, ECO:0000256|SAAS:SAAS0004138
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IVL0_KORVE
lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase
Displaying items 1-30 of 31 in total

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