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13_1_20cm_3_scaffold_3834

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_3834_1
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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1..1416
DNA (1416bp) protein (472aa)
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" sourc
tRNA modification GTPase MnmE n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D719_9BACT rbh
tRNA modification GTPase TrmE
13_1_20cm_3_scaffold_3834_2
unknown

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1413..1586
DNA (174bp) protein (58aa)

This feature has no annotations

13_1_20cm_3_scaffold_3834_3
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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1583..2602
DNA (1020bp) protein (340aa)
Dihydroorotate dehydrogenase (quinone) {ECO:0000256|HAMAP-Rule:MF_00225, ECO:0000256|SAAS:SAAS00054567}; EC=1.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00225, ECO:0000256|SAAS:SAAS00084821};; DHOdehase {ECO:00
pyrD; dihydroorotate dehydrogenase 2 (EC:1.3.98.1)
Dihydroorotate dehydrogenase (quinone) n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D718_9BACT
13_1_20cm_3_scaffold_3834_4
Salinisphaera hydrothermalis, Salinisphaera, Salinisphaerales, Gammaproteobacteria, Proteobacteria, Bacteria

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2675..3373
DNA (699bp) protein (233aa)
Uncharacterized protein n=2 Tax=Lawsonia intracellularis RepID=M1GG23_LAWIN
Uncharacterized protein {ECO:0000313|EMBL:KEZ77878.1}; TaxID=1304275 species="Bacteria; Proteobacteria; Gammaproteobacteria; Salinisphaerales; Salinisphaeraceae; Salinisphaera.;" source="Salinisphaera
hypothetical protein
13_1_20cm_3_scaffold_3834_5
Opitutaceae bacterium TAV1, Opitutales, Opitutae, Verrucomicrobia, Bacteria

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comp(3508..3927)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Opitutaceae bacterium TAV1 RepID=I6B219_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EIQ01311.1}; Flags: Precursor;; TaxID=278956 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;"
hypothetical protein
13_1_20cm_3_scaffold_3834_6

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comp(3924..4229)
DNA (306bp) protein (102aa)
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49423.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
13_1_20cm_3_scaffold_3834_7

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comp(4226..4807)
DNA (582bp) protein (194aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XJL6_9BACT
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49422.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ECF subfamily RNA polymerase sigma-24 factor
13_1_20cm_3_scaffold_3834_8

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5047..5433
DNA (387bp) protein (129aa)
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49421.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
13_1_20cm_3_scaffold_3834_9

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comp(5515..5724)
DNA (210bp) protein (70aa)
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49420.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
13_1_20cm_3_scaffold_3834_10

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5799..7538
DNA (1740bp) protein (580aa)
gamma-glutamyltransferase n=1 Tax=Kangiella aquimarina RepID=UPI000365CCF5 rbh
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49419.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
gamma-glutamyltransferase
13_1_20cm_3_scaffold_3834_11

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comp(7662..8264)
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CV42_9BACT
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49418.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
13_1_20cm_3_scaffold_3834_12

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8431..8904
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D6H8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AIA12737.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
13_1_20cm_3_scaffold_3834_13
unknown

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comp(9050..9520)
DNA (471bp) protein (157aa)

This feature has no annotations

13_1_20cm_3_scaffold_3834_14

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9585..11456
DNA (1872bp) protein (624aa)
Beta-lactamase n=1 Tax=Cyanothece sp. (strain PCC 7425 / ATCC 29141) RepID=B8HV34_CYAP4
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49415.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
beta-lactamase
13_1_20cm_3_scaffold_3834_15

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11510..12121
DNA (612bp) protein (204aa)
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49414.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Putative uncharacterized protein id=2971017 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
13_1_20cm_3_scaffold_3834_16
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(12245..13438)
DNA (1194bp) protein (398aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DAA4_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EDY16565.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
13_1_20cm_3_scaffold_3834_17

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comp(13810..14643)
DNA (834bp) protein (278aa)
Beta-lactamase domain protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DB14_9BACT
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48382.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
beta-lactamase
13_1_20cm_3_scaffold_3834_18
unknown

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14747..14935
DNA (189bp) protein (63aa)

This feature has no annotations

Displaying 18 items

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