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13_1_20cm_3_scaffold_390

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_390_1
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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70..1344
DNA (1275bp) protein (425aa)
GTPase Obg n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=OBG_THERP
GTPase obg; K03979 GTP-binding protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
putative GTPase
13_1_20cm_3_scaffold_390_2
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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1341..1895
DNA (555bp) protein (185aa)
nicotinate (nicotinamide) nucleotide adenylyltransferase (EC:3.5.4.4); K00969 nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
nicotinate (nicotinamide) nucleotide adenylyltransferase (EC:3.5.4.4)
Probable nicotinate-nucleotide adenylyltransferase n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=NADD_ROSS1
13_1_20cm_3_scaffold_390_3
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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1892..2245
DNA (354bp) protein (118aa)
Ribosomal silencing factor RsfS n=2 Tax=Paenibacillus RepID=F5LN80_9BACL
hypothetical protein; K09710 ribosome-associated protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
iojap family protein
13_1_20cm_3_scaffold_390_4
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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comp(2246..3418)
DNA (1173bp) protein (391aa)
Putative permease n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6P0J3_9FIRM
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein
13_1_20cm_3_scaffold_390_trna_1
unknown

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3599..3671
DNA (73bp)
transferRNA
13_1_20cm_3_scaffold_390_5
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

3697..3819
DNA (123bp) protein (41aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_20cm_3_scaffold_390_6
R_OP11_Levybacteria_37_33, Levybacteria, Microgenomates, Bacteria

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4022..4768
DNA (747bp) protein (249aa)
Allergen V5/Tpx-1 family protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02AW0_SOLUE
Allergen V5/Tpx-1 family protein Tax=RIFCSPHIGHO2_01_FULL_OP11_Levybacteria_37_33_curated
Allergen V5/Tpx-1 family protein
13_1_20cm_3_scaffold_390_7
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

4808..6316
DNA (1509bp) protein (503aa)
aldehyde Dehydrogenase; K00128 aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Aldehyde Dehydrogenase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C1X5_SPHTD
aldehyde Dehydrogenase
13_1_20cm_3_scaffold_390_8
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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comp(6320..7435)
DNA (1116bp) protein (372aa)
integral membrane sensor signal transduction histidine kinase (EC:2.7.13.3); K02484 two-component system, OmpR family, sensor kinase [EC:2.7.13.3] Tax=RBG_16_Chloroflexi_63_12_curated
histidine kinase (EC:2.7.13.3); K02484 two-component system, OmpR family, sensor kinase [EC:2.7.13.3] id=1247318 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi rbh
integral membrane sensor signal transduction histidine kinase (EC:2.7.13.3)
13_1_20cm_3_scaffold_390_9
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

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comp(7432..8106)
DNA (675bp) protein (225aa)
Two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SQV1_9BACT id=1247317 bin=RBG9 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG9 organism_group=Chloroflexi
winged helix family two component transcriptional regulator Tax=RBG_16_RIF_CHLX_69_14_curated
winged helix family two component transcriptional regulator
13_1_20cm_3_scaffold_390_10
unknown

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comp(8182..8544)
DNA (363bp) protein (121aa)

This feature has no annotations

13_1_20cm_3_scaffold_390_11
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(8628..9176)
DNA (549bp) protein (183aa)
hypothetical protein; K07020 Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Alpha/beta hydrolase superfamily enzyme, predicted hydrolase id=4413390 bin=GWC2_Chloroflexi_73_18 species=Rhodococcus triatomae genus=Rhodococcus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
hypothetical protein
13_1_20cm_3_scaffold_390_12
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(9173..11563)
DNA (2391bp) protein (797aa)
ATP-dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
ATP-dependent DNA ligase family protein n=1 Tax=Gramella forsetii (strain KT0803) RepID=A0LY41_GRAFK rbh
ATP-dependent DNA ligase
13_1_20cm_3_scaffold_390_13
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

11599..13230
DNA (1632bp) protein (544aa)
hypothetical protein n=1 Tax=Actinoalloteichus spitiensis RepID=UPI00036FA6C8
lipoprotein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
lipoprotein
13_1_20cm_3_scaffold_390_14
Stackebrandtia nassauensis, Stackebrandtia, Glycomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13236..13658
DNA (423bp) protein (141aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI00036E28AC
Uncharacterized protein {ECO:0000313|EMBL:ADD40463.1}; TaxID=446470 species="Bacteria; Actinobacteria; Glycomycetales; Glycomycetaceae; Stackebrandtia.;" source="Stackebrandtia nassauensis (strain DSM
hypothetical protein
13_1_20cm_3_scaffold_390_15
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13728..14573
DNA (846bp) protein (282aa)
Non-homologous end joining protein Ku {ECO:0000256|HAMAP-Rule:MF_01875}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora
Probable DNA repair protein Dred_2003 id=4413391 bin=GWC2_Chloroflexi_73_18 species=Desulfotomaculum reducens genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
Ku protein
13_1_20cm_3_scaffold_390_16
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

14590..15666
DNA (1077bp) protein (359aa)
DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1] Tax=CSP1_4_Chloroflexi
DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1] id=14629308 bin=bin8_Chloro species=Pseudonocardia dioxanivorans genus=Pseudonocardia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
DNA polymerase
13_1_20cm_3_scaffold_390_17
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

15733..16305
DNA (573bp) protein (191aa)
pyrG; CTP synthetase (EC:6.3.4.2); K01937 CTP synthase [EC:6.3.4.2] Tax=CSP1_4_Chloroflexi
pyrG; CTP synthetase (EC:6.3.4.2); K01937 CTP synthase [EC:6.3.4.2] id=14628780 bin=bin8_Chloro species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
pyrG; CTP synthetase (EC:6.3.4.2)
Displaying 18 items

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