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13_1_20cm_3_scaffold_4072

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_4072_1
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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1..852
DNA (852bp) protein (284aa)
Cysteine desulfurase family protein {ECO:0000313|EMBL:ABU59030.1}; EC=2.8.1.7 {ECO:0000313|EMBL:ABU59030.1};; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae;
cysteine desulfurase (EC:2.8.1.7)
Cysteine desulfurase family protein n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NN97_ROSCS
13_1_20cm_3_scaffold_4072_2
Saccharomonospora cyanea, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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941..1555
DNA (615bp) protein (205aa)
Putative flavoprotein n=1 Tax=Saccharomonospora cyanea NA-134 RepID=H5XL63_9PSEU
Putative flavoprotein {ECO:0000313|EMBL:EHR63571.1}; TaxID=882082 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora cyanea NA-134
NADPH-dependent FMN reductase
13_1_20cm_3_scaffold_4072_3
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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1563..2477
DNA (915bp) protein (305aa)
Spore coat polysaccharide biosynthesis protein spsK n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MIZ2_9BACT
Spore coat polysaccharide biosynthesis protein spsK {ECO:0000313|EMBL:CBE67357.1}; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomir
spsK; Spore coat polysaccharide biosynthesis protein spsK
13_1_20cm_3_scaffold_4072_4
RBG_13_Chloroflexi_56_8b_curated, Chloroflexi, Bacteria

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2506..3570
DNA (1065bp) protein (355aa)
glucose-1-phosphate thymidylyltransferase; K00973 glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] Tax=RBG_13_Chloroflexi_56_8b_curated
Glucose-1-phosphate thymidyltransferase n=2 Tax=Chloroflexus RepID=A9WE24_CHLAA rbh
glucose-1-phosphate thymidylyltransferase
13_1_20cm_3_scaffold_4072_5
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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3567..4592
DNA (1026bp) protein (342aa)
dTDP-glucose 4,6-dehydratase; K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] Tax=RBG_16_Chloroflexi_63_12_curated
dTDP-glucose 4,6-dehydratase id=3234516 bin=GWA2_Methylomirabilis_73_35 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
dTDP-glucose 4,6-dehydratase
13_1_20cm_3_scaffold_4072_6
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

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4655..5110
DNA (456bp) protein (152aa)
dTDP-4-dehydrorhamnose 3 5-epimerase-like protein; K01790 dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] Tax=RBG_16_Chloroflexi_68_14_curated
SpsL id=3290784 bin=GWF2_Planctomycete_41_51 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWF2_Planctomycete_41_51 organism_group=Planctomycetes organism_desc=a211
spore coat protein
13_1_20cm_3_scaffold_4072_7
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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5164..6699
DNA (1536bp) protein (512aa)
Thiamine pyrophosphate protein TPP binding domain protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TGW9_9CHLR
Thiamine pyrophosphate protein TPP binding domain protein {ECO:0000313|EMBL:EFH88898.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobac
thiamine pyrophosphate protein TPP binding domain-containing protein
13_1_20cm_3_scaffold_4072_8
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

6717..7670
DNA (954bp) protein (318aa)
Branched-chain amino acid aminotransferase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C6Y6_SPHTD rbh
Branched-chain amino acid aminotransferase {ECO:0000313|EMBL:ACZ37747.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sph
branched-chain amino acid aminotransferase
13_1_20cm_3_scaffold_4072_9
Agrobacterium sp. ATCC 31749, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7734..8753
DNA (1020bp) protein (340aa)
Threonine dehydratase n=1 Tax=Agrobacterium sp. ATCC 31749 RepID=F5J840_9RHIZ
Threonine dehydratase {ECO:0000313|EMBL:EGL65893.1}; TaxID=82789 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" sour
eutB; threonine dehydratase
13_1_20cm_3_scaffold_4072_10
RBG_13_Nitrospirae_41_22_curated, Nitrospirae, Bacteria

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comp(8821..9531)
DNA (711bp) protein (237aa)
Nucleotidyl transferase n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NP68_ROSCS
putative mannose-1-phosphate guanyltransferase Tax=RBG_13_Nitrospirae_41_22_curated
nucleotidyl transferase
13_1_20cm_3_scaffold_4072_11

Not on your lists

comp(9666..10631)
DNA (966bp) protein (322aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6Q698_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBI02721.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
PE-PGRS family protein
13_1_20cm_3_scaffold_4072_12
RBG_13_Chloroflexi_68_17_curated, Chloroflexi, Bacteria

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comp(11076..11768)
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C8K5_SPHTD
hypothetical protein Tax=RBG_13_Chloroflexi_68_17_curated
hypothetical protein
13_1_20cm_3_scaffold_4072_13
Natrialba taiwanensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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11990..12703
DNA (714bp) protein (238aa)
AzlC family protein n=1 Tax=Natrialba taiwanensis DSM 12281 RepID=M0ADS1_9EURY
AzlC family protein {ECO:0000313|EMBL:ELY95997.1}; TaxID=1230458 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba taiwanensis DSM 12281.;"
putative branched-chain amino acid permease (azaleucine resistance)
13_1_20cm_3_scaffold_4072_14
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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12693..12989
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U2YVF5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:GAD52752.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum MH1-52-1.;"
branched-chain amino acid transport
13_1_20cm_3_scaffold_4072_15
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13059..13613
DNA (555bp) protein (185aa)
putative phosphatase, C-terminal domain of histone macro H2A1 like protein Tax=RBG_13_Deltaproteobacteria_61_14_curated
Appr-1-p histone processing protein id=3548105 bin=GWC2_Deltaproteobacteria_42_51 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
hypothetical protein
13_1_20cm_3_scaffold_4072_16

Not on your lists

13744..14310
DNA (567bp) protein (189aa)
Uracil-DNA glycosylase, family 4 n=2 Tax=Ralstonia RepID=E2SYG7_9RALS
Marine sediment metagenome DNA, contig: S12H4_S07638 {ECO:0000313|EMBL:GAI94766.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
phage SPO1 DNA polymerase-like protein
13_1_20cm_3_scaffold_4072_17
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14307..14927)
DNA (621bp) protein (207aa)
thioredoxin; K05838 putative thioredoxin Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
Thioredoxin id=1956516 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
thioredoxin
13_1_20cm_3_scaffold_4072_18
unknown

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comp(15102..15569)
DNA (468bp) protein (156aa)

This feature has no annotations

13_1_20cm_3_scaffold_4072_19
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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16599..18812
DNA (2214bp) protein (738aa)
Uncharacterized protein {ECO:0000313|EMBL:KFE72303.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyal
Putative uncharacterized protein id=3354012 bin=GWC2_Methylomirabilis_70_24 species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Bacterial membrane protein YfhO
Displaying 19 items

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