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13_1_20cm_3_scaffold_4079

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_4079_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(3..593)
DNA (591bp) protein (197aa)
cytochrome c biogenesis protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Cytochrome c assembly protein id=3366873 bin=GWC2_Methylomirabilis_70_16 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
cytochrome c assembly protein
13_1_20cm_3_scaffold_4079_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(640..1920)
DNA (1281bp) protein (427aa)
Putative uncharacterized protein n=1 Tax=Ralstonia solanacearum K60-1 RepID=H5WGJ8_RALSL
conserved exported protein of unknown function, putative Peptidoglycan-binding LysM domain
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_20cm_3_scaffold_4079_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(1892..2359)
DNA (468bp) protein (156aa)
Single-stranded DNA-binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4G5_GEMAT
ssb; single-strand binding protein; K03111 single-strand DNA-binding protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ssb; single-strand binding protein
13_1_20cm_3_scaffold_4079_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(2461..2859)
DNA (399bp) protein (133aa)
Ribosomal-protein-alanine acetyltransferase n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5EXL4_9FIRM
Ribosomal-protein-alanine acetyltransferase {ECO:0000313|EMBL:AHG91095.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
ribosomal-protein-alanine acetyltransferase
13_1_20cm_3_scaffold_4079_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(2879..3622)
DNA (744bp) protein (248aa)
UPI0003D5FF08 related cluster n=1 Tax=unknown RepID=UPI0003D5FF08
peptidase M22 glycoprotease Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
universal protein YeaZ
13_1_20cm_3_scaffold_4079_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(3619..4026)
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Lamprocystis purpurea RepID=UPI00036EC209
Uncharacterized protein {ECO:0000313|EMBL:AHG91097.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
putative protein family UPF0079, ATPase
13_1_20cm_3_scaffold_4079_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(3989..5773)
DNA (1785bp) protein (595aa)
UvrABC system protein B n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=UVRB_GEMAT
uvrB; UvrABC system protein B; K03702 excinuclease ABC subunit B Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
uvrB; UvrABC system protein B
13_1_20cm_3_scaffold_4079_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(5916..8105)
DNA (2190bp) protein (730aa)
GTP pyrophosphokinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4H2_GEMAT
RelA/SpoT family protein {ECO:0000313|EMBL:AHG91100.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
RelA/SpoT family protein
13_1_20cm_3_scaffold_4079_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(8102..8566)
DNA (465bp) protein (155aa)
DNA repair protein RadC n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4H3_GEMAT
radC; DNA repair protein RadC; K03630 DNA repair protein RadC Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
DNA repair protein RadC
13_1_20cm_3_scaffold_4079_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(8577..10433)
DNA (1857bp) protein (619aa)
Protein translocase subunit SecA n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4H8_GEMAT
secA; preprotein translocase SecA subunit; K03070 preprotein translocase subunit SecA Tax=RBG_16_Gemmatimonadetes_66_8_curated
secA; preprotein translocase SecA subunit
13_1_20cm_3_scaffold_4079_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(10409..11968)
DNA (1560bp) protein (520aa)
Protein translocase subunit SecA n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4H8_GEMAT
secA; preprotein translocase SecA subunit; K03070 preprotein translocase subunit SecA Tax=RBG_16_Gemmatimonadetes_66_8_curated
Protein translocase subunit secA
13_1_20cm_3_scaffold_4079_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(11977..12552)
DNA (576bp) protein (192aa)
nicotinate (nicotinamide) nucleotide adenylyltransferase (EC:2.7.7.18); K00969 nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] Tax=RBG_16_Gemmatimonadetes_66_8_curated
nicotinate-nucleotide adenylyltransferase (EC:2.7.7.18)
nicotinate-nucleotide adenylyltransferase n=1 Tax=Thermus islandicus RepID=UPI0003B730A4
13_1_20cm_3_scaffold_4079_13
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(12558..13319)
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4I0_GEMAT
hypothetical protein; K05807 putative lipoprotein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_1_20cm_3_scaffold_4079_14
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(13316..13864)
DNA (549bp) protein (183aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_20cm_3_scaffold_4079_15
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(14877..15881)
DNA (1005bp) protein (335aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G3W3_GEOUR
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ABQ26481.1}; TaxID=351605 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobact
NAD-dependent epimerase/dehydratase
13_1_20cm_3_scaffold_4079_16
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(15878..16339)
DNA (462bp) protein (154aa)
NAD-dependent epimerase/dehydratase family protein; K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] Tax=GWC2_Gemmatimonadetes_71_10_curated
NAD-dependent dehydratase n=1 Tax=Henriciella marina RepID=UPI00036156FD
NAD-dependent epimerase/dehydratase
Displaying 16 items

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