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13_1_20cm_3_scaffold_4121

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_4121_1
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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3..770
DNA (768bp) protein (256aa)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleB
Triosephosphate isomerase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZ05_9BACT
triosephosphate isomerase
13_1_20cm_3_scaffold_4121_2
RBG_16_Planctomycetes_43_13_curated, Planctomycetes, Bacteria

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comp(855..2591)
DNA (1737bp) protein (579aa)
Peptidyl-prolyl cis-trans isomerase (Rotamase)-cyclophilin family n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DSN7_SINAD
Beta-propeller repeat protein Tax=RBG_16_Planctomycetes_43_13_curated
peptidyl-prolyl cis-trans isomerase
13_1_20cm_3_scaffold_4121_3
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(2647..3318)
DNA (672bp) protein (224aa)
Putative sigma E regulatory protein, MucB/RseB n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZL7_9BACT
Putative sigma E regulatory protein, MucB/RseB {ECO:0000313|EMBL:EDY20181.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobact
sigma E regulatory protein MucB/RseB
13_1_20cm_3_scaffold_4121_4
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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3418..4059
DNA (642bp) protein (214aa)
Phosphoesterase PA-phosphatase related n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZL6_9BACT
Phosphoesterase PA-phosphatase related {ECO:0000313|EMBL:EDY20180.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
pgpB; membrane-associated phospholipid phosphatase
13_1_20cm_3_scaffold_4121_5
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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4064..6295
DNA (2232bp) protein (744aa)
Glycosyl transferase family 39 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZL5_9BACT
Glycosyl transferase family 39 {ECO:0000313|EMBL:EDY20179.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
arnT; 4-amino-4-deoxy-L-arabinose transferase or related glycosyltransferase of PMT family
13_1_20cm_3_scaffold_4121_6
RBG_13_Planctomycetes_63_9_curated, Planctomycetia, Planctomycetes, Bacteria

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6652..6963
DNA (312bp) protein (104aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002E8F9EF
hypothetical protein Tax=RBG_13_Planctomycetes_63_9_curated
hypothetical protein
13_1_20cm_3_scaffold_4121_7

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7110..7451
DNA (342bp) protein (114aa)
Putative PTS IIA-like nitrogen-regulatory protein PtsN n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D6N8_9BACT
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48651.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ptsN; nitrogen regulatory IIA protein
13_1_20cm_3_scaffold_4121_8

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7457..9100
DNA (1644bp) protein (548aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=77133 species="Bacteria; envir
arginyl-tRNA synthetase (EC:6.1.1.19)
Arginine--tRNA ligase n=1 Tax=Akkermansia sp. CAG:344 RepID=R7DST6_9BACT
13_1_20cm_3_scaffold_4121_9

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9224..11710
DNA (2487bp) protein (829aa)
malto-oligosyltrehalose synthase (EC:5.4.99.15)
Malto-oligosyltrehalose synthase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZ67_9BACT
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48649.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
13_1_20cm_3_scaffold_4121_10

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comp(12145..12822)
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D4T7_9BACT
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48648.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
13_1_20cm_3_scaffold_4121_11

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comp(13081..13638)
DNA (558bp) protein (186aa)
Elongation factor P n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D4T6_9BACT
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
elongation factor P
13_1_20cm_3_scaffold_4121_12
Streptomyces roseochromogenus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(13736..16426)
DNA (2691bp) protein (897aa)
Uncharacterized protein n=1 Tax=Streptomyces roseochromogenes subsp. oscitans DS 12.976 RepID=V6JM83_STRRC
Uncharacterized protein {ECO:0000313|EMBL:EST21020.1}; TaxID=1352936 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces roseochromogenus subsp
hypothetical protein
13_1_20cm_3_scaffold_4121_13
unknown

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16592..17182
DNA (591bp) protein (197aa)

This feature has no annotations

13_1_20cm_3_scaffold_4121_14
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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17473..17973
DNA (501bp) protein (167aa)
DSBA oxidoreductase (Fragment) n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NIW9_9DELT
Protein-disulfide isomerase {ECO:0000313|EMBL:CDM64317.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
thioredoxin domain protein
13_1_20cm_3_scaffold_4121_15
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

17970..18416
DNA (447bp) protein (149aa)
Predicted membrane protein {ECO:0000313|EMBL:CDM64318.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Vitamin K epoxide reductase id=3423419 bin=GWA1_ZB2_49_26 species=Bacillus cellulosilyticus genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
hypothetical protein
13_1_20cm_3_scaffold_4121_16
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

18413..19981
DNA (1569bp) protein (523aa)
Type I phosphodiesterase/nucleotide pyrophosphatase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XSR7_9BACT
Type I phosphodiesterase/nucleotide pyrophosphatase {ECO:0000313|EMBL:EEF57119.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicr
type I phosphodiesterase/nucleotide pyrophosphatase
13_1_20cm_3_scaffold_4121_17
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20022..20420
DNA (399bp) protein (133aa)
Tax=RBG_13_Deltaproteobacteria_43_22_curated
13_1_20cm_3_scaffold_4121_18
unknown

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20417..20611
DNA (195bp) protein (65aa)

This feature has no annotations

13_1_20cm_3_scaffold_4121_19
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

20615..21688
DNA (1074bp) protein (358aa)
Radical SAM domain protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XBU7_9BACT
Radical SAM domain protein {ECO:0000313|EMBL:EEF62415.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="P
radical SAM domain-containing protein
Displaying 19 items

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