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13_1_20cm_3_scaffold_4268

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_4268_1
unknown

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comp(3..251)
DNA (249bp) protein (83aa)

This feature has no annotations

13_1_20cm_3_scaffold_4268_2
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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276..1217
DNA (942bp) protein (314aa)
tRNA dimethylallyltransferase {ECO:0000255|HAMAP-Rule:MF_00185}; EC=2.5.1.75 {ECO:0000255|HAMAP-Rule:MF_00185};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000255|HAMAP-Rule:MF_0018
tRNA dimethylallyltransferase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=MIAA_KORVE
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase
13_1_20cm_3_scaffold_4268_3
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

1231..1854
DNA (624bp) protein (208aa)
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobact
Glycoside hydrolase, family 3-like protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IHT6_KORVE
glycoside hydrolase
13_1_20cm_3_scaffold_4268_4
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

1851..3071
DNA (1221bp) protein (407aa)
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobact
Glycoside hydrolase, family 3-like protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IHT6_KORVE
glycoside hydrolase
13_1_20cm_3_scaffold_4268_5
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

3084..3668
DNA (585bp) protein (195aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IHT5_KORVE
Uncharacterized protein {ECO:0000313|EMBL:ABF43565.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strai
hypothetical protein
13_1_20cm_3_scaffold_4268_6
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

3769..5313
DNA (1545bp) protein (515aa)
Propionyl-CoA carboxylase carboxyltransferase subunit n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IHF3_KORVE
Propionyl-CoA carboxylase carboxyltransferase subunit {ECO:0000313|EMBL:ABF43697.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source
carboxyl transferase
13_1_20cm_3_scaffold_4268_7
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5495..6106
DNA (612bp) protein (204aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002DDEA82
Uncharacterized protein {ECO:0000313|EMBL:AHX13781.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.
hypothetical protein
13_1_20cm_3_scaffold_4268_8
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

6231..7124
DNA (894bp) protein (298aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IKN4_KORVE
Uncharacterized protein {ECO:0000313|EMBL:ABF42566.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacte
hypothetical protein
13_1_20cm_3_scaffold_4268_9
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

7196..8386
DNA (1191bp) protein (397aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IKN4_KORVE
Uncharacterized protein {ECO:0000313|EMBL:ABF42566.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacte
hypothetical protein
13_1_20cm_3_scaffold_4268_10
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

comp(9050..10333)
DNA (1284bp) protein (428aa)
Major facilitator superfamily (MFS) transporter n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IKY9_KORVE
major facilitator transporter Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
major facilitator superfamily transporter
13_1_20cm_3_scaffold_4268_11
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

10492..11799
DNA (1308bp) protein (436aa)
Lipoprotein releasing system, transmembrane protein, LolC/E family n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IKN2_KORVE rbh
Lipoprotein releasing system, transmembrane protein, LolC/E family {ECO:0000313|EMBL:ABF42568.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae;
LolC/E family lipoprotein releasing system, transmembrane protein
13_1_20cm_3_scaffold_4268_12
unknown

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comp(11880..12341)
DNA (462bp) protein (154aa)

This feature has no annotations

13_1_20cm_3_scaffold_4268_13
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

12508..13215
DNA (708bp) protein (236aa)
Lipoprotein-releasing system ATP-binding protein LolD {ECO:0000255|HAMAP-Rule:MF_01708}; EC=3.6.3.- {ECO:0000255|HAMAP-Rule:MF_01708};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales;
Lipoprotein-releasing system ATP-binding protein LolD n=2 Tax=Koribacter versatilis (strain Ellin345) RepID=LOLD_KORVE
ABC transporter ATPase
13_1_20cm_3_scaffold_4268_14
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

13450..15894
DNA (2445bp) protein (815aa)
ATP-dependent Clp protease ATP-binding protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000364FE28 rbh
ATPase AAA-2 {ECO:0000313|EMBL:ABF42574.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345)
ATPase AAA
13_1_20cm_3_scaffold_4268_15
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(16626..18533)
DNA (1908bp) protein (636aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteri
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IVN1_KORVE rbh
FtsH peptidase
13_1_20cm_3_scaffold_4268_16
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(18954..20339)
DNA (1386bp) protein (462aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine
tRNA(Ile)-lysidine synthase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IVN3_KORVE rbh
tRNA(Ile)-lysidine synthetase-like protein
13_1_20cm_3_scaffold_4268_17
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(20364..20837)
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NZP3_GRAMM
Uncharacterized protein {ECO:0000313|EMBL:AEU39163.1}; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella mallensis (strain ATCC B
hypothetical protein
13_1_20cm_3_scaffold_4268_18
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(20834..21661)
DNA (828bp) protein (276aa)
PEP phosphonomutase-like protein Tax=CSP1_6_Rokubacteria
PEP phosphonomutase-like protein id=14626847 bin=bin7_NC10_sister species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_20cm_3_scaffold_4268_19
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21658..21984)
DNA (327bp) protein (109aa)
Thioesterase family protein n=1 Tax=Selenomonas sp. CM52 RepID=J6I3C7_9FIRM
thioesterase Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
13_1_20cm_3_scaffold_4268_20
unknown

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comp(22028..22612)
DNA (585bp) protein (195aa)

This feature has no annotations

13_1_20cm_3_scaffold_4268_21
Gloeobacter violaceus, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

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comp(22772..23344)
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00037EF70C
Gll3385 protein {ECO:0000313|EMBL:BAC91326.1}; TaxID=251221 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter violaceus (strain PCC 7421).;"
hypothetical protein
13_1_20cm_3_scaffold_4268_22
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(23771..25006)
DNA (1236bp) protein (412aa)
Beta-lactamase {ECO:0000256|RuleBase:RU361140}; EC=3.5.2.6 {ECO:0000256|RuleBase:RU361140};; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Cand
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000372AB54
penicillin-binding protein, transpeptidase
13_1_20cm_3_scaffold_4268_23
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(25257..26129)
DNA (873bp) protein (291aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IKN7_KORVE
Uncharacterized protein {ECO:0000313|EMBL:ABF42563.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacte
hypothetical protein
Displaying 23 items

View Taxonomy