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13_1_20cm_3_scaffold_427

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_427_1
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

266..1540
DNA (1275bp) protein (425aa)
Metal dependent phosphohydrolase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C2D5_SPHTD
Metal dependent phosphohydrolase {ECO:0000313|EMBL:ACZ38402.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter
metal dependent phosphohydrolase
13_1_20cm_3_scaffold_427_2
Xanthomonas arboricola, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1548..3929)
DNA (2382bp) protein (794aa)
transcriptional regulator n=1 Tax=Xanthomonas sacchari RepID=UPI000262B4BA
Transcriptional regulator {ECO:0000313|EMBL:KER84913.1}; TaxID=454957 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas arbo
transcriptional regulator, LuxR family
13_1_20cm_3_scaffold_427_3
Pseudomonas sp. StFLB209, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4248..4514)
DNA (267bp) protein (89aa)
hypothetical protein n=1 Tax=Humibacter albus RepID=UPI0003B52F66
LuxR family DNA-binding response regulator
LuxR family DNA-binding response regulator {ECO:0000313|EMBL:BAP44494.1}; TaxID=1028989 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source
13_1_20cm_3_scaffold_427_4
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

comp(4577..5581)
DNA (1005bp) protein (335aa)
adenosine deaminase (EC:3.5.4.4); K01488 adenosine deaminase [EC:3.5.4.4] Tax=RBG_16_RIF_CHLX_70_13_curated
adenosine deaminase (EC:3.5.4.4); K01488 adenosine deaminase [EC:3.5.4.4] id=14629293 bin=bin8_Chloro species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=bin8_Chloro organism_group=Chloroflexi
adenosine deaminase
13_1_20cm_3_scaffold_427_5
unknown

Not on your lists

5596..6204
DNA (609bp) protein (203aa)

This feature has no annotations

13_1_20cm_3_scaffold_427_6
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

6201..7322
DNA (1122bp) protein (374aa)
Phosphatidylinositol alpha-mannosyltransferase {ECO:0000313|EMBL:ABG05537.1}; EC=2.4.1.57 {ECO:0000313|EMBL:ABG05537.1};; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales
phosphatidylinositol alpha-mannosyltransferase (EC:2.4.1.57)
Phosphatidylinositol alpha-mannosyltransferase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ASU1_RUBXD
13_1_20cm_3_scaffold_427_7
Bacteroides sp. CAG:709, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7319..8029
DNA (711bp) protein (237aa)
phosphatidylinositol alpha-mannosyltransferase (EC:2.4.1.57)
Integral membrane protein n=1 Tax=Bacteroides sp. CAG:709 RepID=R6F272_9BACE
Integral membrane protein {ECO:0000313|EMBL:CDA96177.1}; TaxID=1262748 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacte
13_1_20cm_3_scaffold_427_8
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

7969..8340
DNA (372bp) protein (124aa)
Phosphatidylinositol alpha-mannosyltransferase {ECO:0000313|EMBL:ADB50041.1}; EC=2.4.1.57 {ECO:0000313|EMBL:ADB50041.1};; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobact
phosphatidylinositol alpha-mannosyltransferase (EC:2.4.1.57)
Phosphatidylinositol alpha-mannosyltransferase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F065_CONWI
13_1_20cm_3_scaffold_427_9
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

8306..9229
DNA (924bp) protein (308aa)
Glycerate kinase (EC:2.7.1.31) Tax=RBG_16_Actinobacteria_68_12_curated
Glycerate kinase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FCD5_CONWI
hypothetical protein
13_1_20cm_3_scaffold_427_10
unknown

Not on your lists

9248..9469
DNA (222bp) protein (74aa)

This feature has no annotations

13_1_20cm_3_scaffold_427_11
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9418..9612)
DNA (195bp) protein (65aa)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclea
exodeoxyribonuclease VII small subunit n=1 Tax=Sphingomonas RepID=UPI000263054D
exodeoxyribonuclease VII small subunit
13_1_20cm_3_scaffold_427_12
Streptomyces violaceusniger, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9609..10745)
DNA (1137bp) protein (379aa)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclea
exodeoxyribonuclease VII large subunit n=1 Tax=Streptomyces sp. BoleA5 RepID=UPI00035DCC2C
exodeoxyribonuclease 7 large subunit
13_1_20cm_3_scaffold_427_13
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(10789..10992)
DNA (204bp) protein (68aa)
Tax=RBG_16_Actinobacteria_68_12_curated
13_1_20cm_3_scaffold_427_14
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(11067..12392)
DNA (1326bp) protein (442aa)
Putative uncharacterized protein n=1 Tax=Ectocarpus siliculosus RepID=D8LKJ5_ECTSI
transmembrane protein Tax=RBG_16_Actinobacteria_67_10_curated
sel1 domain-containing protein repeat-containing protein
13_1_20cm_3_scaffold_427_15
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(12397..13080)
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Frankia sp. CN3 RepID=G6H2J2_9ACTO
hypothetical protein Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
hypothetical protein
13_1_20cm_3_scaffold_427_16
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(13077..13766)
DNA (690bp) protein (230aa)
type 11 methyltransferase; K03183 ubiquinone/menaquinone biosynthesis methyltransferase [EC:2.1.1.163 2.1.1.201] Tax=RBG_16_Actinobacteria_67_10_curated
Methyltransferase type 11 n=1 Tax=Frankia sp. CN3 RepID=G6H2J3_9ACTO
type 11 methyltransferase
13_1_20cm_3_scaffold_427_17
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

13789..14187
DNA (399bp) protein (133aa)
Tax=RBG_16_Actinobacteria_67_10_curated
13_1_20cm_3_scaffold_427_18
Thermaerobacter marianensis, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14187..14966
DNA (780bp) protein (260aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SHN0_THEM7
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ADU51825.1}; TaxID=644966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter
short-chain dehydrogenase/reductase SDR
13_1_20cm_3_scaffold_427_19
unknown

Not on your lists

comp(14956..15894)
DNA (939bp) protein (313aa)

This feature has no annotations

13_1_20cm_3_scaffold_427_20
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

15908..16216
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FDJ4_CONWI
hypothetical protein Tax=RBG_16_Actinobacteria_67_10_curated
hypothetical protein
13_1_20cm_3_scaffold_427_21
Natrialba chahannaoensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16216..16836
DNA (621bp) protein (207aa)
Type 11 methyltransferase n=1 Tax=Natrialba chahannaoensis JCM 10990 RepID=M0ASE5_9EURY
Type 11 methyltransferase {ECO:0000313|EMBL:ELZ01621.1}; TaxID=1227492 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba chahannaoensis JCM 109
ubiE; Methyltransferase type 11
13_1_20cm_3_scaffold_427_22
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

16848..17768
DNA (921bp) protein (307aa)
L-proline dehydrogenase {ECO:0000313|EMBL:ABG05833.1}; EC=1.5.99.8 {ECO:0000313|EMBL:ABG05833.1};; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rub
L-proline dehydrogenase (EC:1.5.99.8)
L-proline dehydrogenase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ARZ5_RUBXD
13_1_20cm_3_scaffold_427_23

Not on your lists

17765..18772
DNA (1008bp) protein (336aa)
gabT2; 4-aminobutyrate transaminase (EC:2.6.1.19)
Aminotransferase class-III n=1 Tax=mine drainage metagenome RepID=E6PC59_9ZZZZ
Aminotransferase class-III {ECO:0000313|EMBL:CBH74042.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
13_1_20cm_3_scaffold_427_24
Longispora albida, Longispora, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(18769..19137)
DNA (369bp) protein (123aa)
hypothetical protein n=1 Tax=Longispora albida RepID=UPI00037B6C38
13_1_20cm_3_scaffold_427_25
Pseudomonas alkylphenolia, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19091..19726)
DNA (636bp) protein (212aa)
Methyltransferase family protein n=1 Tax=Pseudomonas sp. GM84 RepID=J3IYN4_9PSED
Type 12 methyltransferase {ECO:0000313|EMBL:AIL62464.1}; TaxID=237609 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas alky
type 12 methyltransferase
13_1_20cm_3_scaffold_427_26
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(19726..20526)
DNA (801bp) protein (267aa)
short-chain dehydrogenase/reductase SDR; K10780 enoyl-[acyl carrier protein] reductase III [EC:1.3.1.-] Tax=RBG_16_Actinobacteria_67_10_curated
fabL; enoyl-(acyl carrier protein) reductase (EC:1.3.1.9)
hypothetical protein n=1 Tax=Alicyclobacillus pohliae RepID=UPI00035F0066
Displaying 26 items

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