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13_1_20cm_3_scaffold_5104

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_5104_1
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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2..199
DNA (198bp) protein (66aa)
Competence protein ComEA helix-hairpin-helix repeat protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01NQ1_SOLUE
Competence protein ComEA helix-hairpin-helix repeat protein {ECO:0000313|EMBL:ABJ88719.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacterace
helix-hairpin-helix repeat-containing competence protein ComEA
13_1_20cm_3_scaffold_5104_2
R_NC10_66_22, NC10, Bacteria

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212..850
DNA (639bp) protein (213aa)
trpG; anthranilate synthase, component II (EC:4.1.3.27); K01658 anthranilate synthase component II [EC:4.1.3.27] Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
trpG; anthranilate synthase component II (EC:4.1.3.27)
TrpG panthranilate synthase component II (Glutamine amido-transferase) protein n=1 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82Y73_NITEU
13_1_20cm_3_scaffold_5104_3
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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847..1419
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJW4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CBE67547.1}; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
hypothetical protein
13_1_20cm_3_scaffold_5104_4
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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1416..2390
DNA (975bp) protein (325aa)
Putative beta-ribofuranosylaminobenzene 5'-phosphate synthase. Involved in methanopterin biosynthesis (Orf4) n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJW3_9BACT
Putative beta-ribofuranosylaminobenzene 5'-phosphate synthase. Involved in methanopterin biosynthesis (Orf4) {ECO:0000313|EMBL:CBE67546.1}; TaxID=671143 species="Bacteria; candidate division NC10; Can
beta-ribofuranosylaminobenzene 5'-phosphate synthase. Involved in methanopterin biosynthesis (orf4)
13_1_20cm_3_scaffold_5104_5
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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2601..4376
DNA (1776bp) protein (592aa)
XoxF n=1 Tax=uncultured bacterium BAC10-4 RepID=Q4JIU2_9BACT rbh
Methanol dehydrogenase {ECO:0000313|EMBL:KGM31741.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosu
Pyrrolo-quinoline quinone
13_1_20cm_3_scaffold_5104_6
Methylacidiphilum fumariolicum, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

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4556..5260
DNA (705bp) protein (235aa)
hypothetical protein n=1 Tax=Methylobacter marinus RepID=UPI000367365C
Uncharacterized protein {ECO:0000313|EMBL:CCG91655.1}; TaxID=1156937 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" s
methanol oxidation protein
13_1_20cm_3_scaffold_5104_7
unknown

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5294..5722
DNA (429bp) protein (143aa)

This feature has no annotations

13_1_20cm_3_scaffold_5104_8
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5752..6483
DNA (732bp) protein (244aa)
hypothetical protein n=1 Tax=Methylobacter marinus RepID=UPI0003679051
Pentapeptide repeat protein {ECO:0000313|EMBL:ACK49964.1}; Flags: Precursor;; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source
pentapeptide repeat-containing protein
13_1_20cm_3_scaffold_5104_9

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6497..7477
DNA (981bp) protein (327aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium BAC10-4 RepID=Q4JIU1_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:AAY96670.1}; TaxID=333425 species="Bacteria; environmental samples.;" source="uncultured bacterium BAC10-4.;"
hypothetical protein
13_1_20cm_3_scaffold_5104_10
CSP1_5_NC10, NC10, Bacteria

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comp(7474..8016)
DNA (543bp) protein (181aa)
hypothetical protein Tax=CSP1_5_NC10
Crp/Fnr family transcriptional regulator
hypothetical protein id=14429046 bin=bin3_NC10 species=Verrucomicrobium sp. 3C genus=Verrucomicrobium taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=bin3_NC10 organism_group=NC10
13_1_20cm_3_scaffold_5104_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(8106..9464)
DNA (1359bp) protein (453aa)
trmE; putative tRNA modification GTPase TrmE; K03650 tRNA modification GTPase [EC:3.6.-.-] Tax=RBG_16_Gemmatimonadetes_66_8_curated
tRNA modification GTPase MnmE n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEP6_GEMAT
trmE; putative tRNA modification GTPase TrmE
13_1_20cm_3_scaffold_5104_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(9493..10344)
DNA (852bp) protein (284aa)
Membrane protein insertase YidC n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEP7_GEMAT
oxaA; inner membrane protein OxaA; K03217 preprotein translocase subunit YidC Tax=RBG_16_Gemmatimonadetes_66_8_curated
Membrane protein oxaA
13_1_20cm_3_scaffold_5104_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(11131..11358)
DNA (228bp) protein (76aa)
Putative membrane protein insertion efficiency factor n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C6L1_9PLAN
hypothetical protein; K08998 hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_20cm_3_scaffold_5104_14
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(11355..11783)
DNA (429bp) protein (143aa)
Ribosomal protein L34 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEQ0_GEMAT
Ribonuclease P protein component Tax=GWC2_Gemmatimonadetes_71_10_curated
Ribonuclease P protein component
13_1_20cm_3_scaffold_5104_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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11910..13292
DNA (1383bp) protein (461aa)
Chromosomal replication initiator protein DnaA n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3G6_GEMAT
dnaA; chromosomal replication initiator protein DnaA; K02313 chromosomal replication initiator protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
dnaA; chromosomal replication initiator protein DnaA
13_1_20cm_3_scaffold_5104_16
unknown

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13311..13472
DNA (162bp) protein (54aa)

This feature has no annotations

13_1_20cm_3_scaffold_5104_17
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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13543..14673
DNA (1131bp) protein (377aa)
dnaN; DNA polymerase III beta subunit (EC:2.7.7.7); K02338 DNA polymerase III subunit beta [EC:2.7.7.7] Tax=GWC2_Gemmatimonadetes_71_10_curated
DNA polymerase III subunit beta n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3G7_GEMAT
DNA polymerase III, beta subunit
13_1_20cm_3_scaffold_5104_18
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(14552..15301)
DNA (750bp) protein (250aa)
monofunctional biosynthetic peptidoglycan transglycosylase; K03814 monofunctional biosynthetic peptidoglycan transglycosylase [EC:2.4.1.-] Tax=GWC2_Gemmatimonadetes_71_10_curated
Monofunctional biosynthetic peptidoglycan transglycosylase id=1801848 bin=GWB2_Elusimicrobia_63_16 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Elusimicrobia_63_16 organism_group=Elusimicrobia
monofunctional biosynthetic peptidoglycan transglycosylase
13_1_20cm_3_scaffold_5104_19
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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15321..15902
DNA (582bp) protein (194aa)
Putative serine/threonine protein kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAL9_GEMAT
Protein kinase {ECO:0000313|EMBL:AHG88134.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
protein kinase
13_1_20cm_3_scaffold_5104_20
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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15887..16801
DNA (915bp) protein (305aa)
Putative serine/threonine protein kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAM0_GEMAT
Protein kinase {ECO:0000313|EMBL:AHG91985.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
protein kinase
13_1_20cm_3_scaffold_5104_21
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(16791..17558)
DNA (768bp) protein (256aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_20cm_3_scaffold_5104_22
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(17558..18478)
DNA (921bp) protein (307aa)
Tax=GWC2_Gemmatimonadetes_71_10_curated
Displaying 22 items

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