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13_1_20cm_3_scaffold_53

Search features with annotation key words

Displaying items 1-30 of 125 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_53_1
unknown

Not on your lists

comp(1..222)
DNA (222bp) protein (74aa)

This feature has no annotations

13_1_20cm_3_scaffold_53_2
unknown

Not on your lists

comp(302..508)
DNA (207bp) protein (69aa)

This feature has no annotations

13_1_20cm_3_scaffold_53_3
unknown

Not on your lists

701..1327
DNA (627bp) protein (209aa)

This feature has no annotations

13_1_20cm_3_scaffold_53_4
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

1400..2296
DNA (897bp) protein (299aa)
Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent {ECO:0000313|EMBL:ADB53831.1}; EC=1.17.4.1 {ECO:0000313|EMBL:ADB53831.1};; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleoph
ribonucleoside-diphosphate reductase (EC:1.17.4.1)
Vitamin B12-dependent ribonucleotide reductase n=1 Tax=Patulibacter americanus RepID=UPI0003B3B85A
13_1_20cm_3_scaffold_53_5
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

2266..3171
DNA (906bp) protein (302aa)
Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent {ECO:0000313|EMBL:ADB53831.1}; EC=1.17.4.1 {ECO:0000313|EMBL:ADB53831.1};; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleoph
ribonucleoside-diphosphate reductase (EC:1.17.4.1)
Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EZJ3_CONWI
13_1_20cm_3_scaffold_53_6
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3120..3995
DNA (876bp) protein (292aa)
vitamin B12-dependent ribonucleotide reductase (EC:1.17.4.1); K00525 ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
ribonucleoside-diphosphate reductase (EC:1.17.4.1)
mxa:MXAN_2925 vitamin B12-dependent ribonucleotide reductase (EC:1.17.4.1); K00525 ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] id=120681 bin=ACD76 species=ACD76 genus=ACD76 taxon_order=ACD76 taxon_class=ACD76 phylum=OD1 tax=ACD76 organism_group=OD1 (Parcubacteria) organism_desc=OD1
13_1_20cm_3_scaffold_53_7
Nocardia seriolae, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4026..4403)
DNA (378bp) protein (126aa)
hypothetical protein n=1 Tax=Smaragdicoccus niigatensis RepID=UPI0003625453
Uncharacterized protein {ECO:0000313|EMBL:GAM48951.1}; TaxID=37332 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia seriolae.;"
hypothetical protein
13_1_20cm_3_scaffold_53_8
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(4446..5699)
DNA (1254bp) protein (418aa)
Ig family protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01RC5_SOLUE
Ig family protein Tax=RBG_16_Actinobacteria_68_12_curated
Ig family protein
13_1_20cm_3_scaffold_53_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

5738..6397
DNA (660bp) protein (220aa)
Beta-lactamase {ECO:0000256|SAAS:SAAS00063099}; EC=3.5.2.6 {ECO:0000256|SAAS:SAAS00063099};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Beta-lactamase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QPE7_9EURY
beta-lactamase
13_1_20cm_3_scaffold_53_10
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(6562..7908)
DNA (1347bp) protein (449aa)
FAD linked oxidase domain protein n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SCB4_GEOOG
FAD linked oxidase domain-containing protein Tax=RBG_16_RIF_CHLX_69_14_curated
FAD linked oxidase domain-containing protein
13_1_20cm_3_scaffold_53_11
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(7918..9363)
DNA (1446bp) protein (482aa)
Drug resistance transporter, EmrB/QacA subfamily n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FB02_CONWI
Drug resistance transporter, EmrB/QacA subfamily {ECO:0000313|EMBL:ADB53194.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;"
EmrB/QacA subfamily drug resistance transporter
13_1_20cm_3_scaffold_53_12
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

9452..9940
DNA (489bp) protein (163aa)
cupin n=1 Tax=Patulibacter americanus RepID=UPI0003B54AEC
cupin Tax=RBG_16_Actinobacteria_68_12_curated
13_1_20cm_3_scaffold_53_13
Streptomyces cattleya, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9952..10308
DNA (357bp) protein (119aa)
Rhodanese-like protein n=1 Tax=Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC 14057 / NRRL 8057) RepID=F8JPS4_STREN
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; TaxID=1003195 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces cattleya (strain ATCC 3585
hypothetical protein
13_1_20cm_3_scaffold_53_14
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

comp(10295..10885)
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CHT9_THET1
Uncharacterized protein {ECO:0000313|EMBL:ACZ43310.1}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
hypothetical protein
13_1_20cm_3_scaffold_53_15
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10911..11558
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LWQ4_ACIC1
Uncharacterized protein {ECO:0000313|EMBL:ABK53864.1}; Flags: Precursor;; TaxID=351607 species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulol
hypothetical protein
13_1_20cm_3_scaffold_53_16
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11591..11911
DNA (321bp) protein (107aa)
Regulatory protein ArsR n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKM7_PSEUX
Regulatory protein ArsR {ECO:0000313|EMBL:AEA23234.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
regulatory protein ArsR
13_1_20cm_3_scaffold_53_17
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

11895..12356
DNA (462bp) protein (154aa)
transcriptional regulator n=1 Tax=Sinorhizobium medicae RepID=UPI00036375FF
activator of Hsp90 ATPase 1 family protein Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
activator of Hsp90 ATPase 1 family protein
13_1_20cm_3_scaffold_53_18
Enhygromyxa salina, Enhygromyxa, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12357..12761)
DNA (405bp) protein (135aa)
Putative TetR-family transcriptional regulator n=1 Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0HD33_ACTM4
Transcriptional regulator, TetR family protein {ECO:0000313|EMBL:KIG13714.1}; TaxID=215803 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Enhygromyxa.;" source="Enhygromyxa sali
putative TetR-family transcriptional regulator
13_1_20cm_3_scaffold_53_19
Streptomyces sp. 150FB, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12911..13285
DNA (375bp) protein (125aa)
Putative uncharacterized protein n=1 Tax=Streptomyces sp. Mg1 RepID=B4V261_9ACTO
Pyridoxamine 5'-phosphate oxidase {ECO:0000313|EMBL:KIF77554.1}; TaxID=1576605 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. 150FB.;"
hypothetical protein
13_1_20cm_3_scaffold_53_20
RLO_Entotheonella_69_37, Entotheonella, Bacteria

Not on your lists

comp(13263..14222)
DNA (960bp) protein (320aa)
2-nitropropane dioxygenase; K00459 nitronate monooxygenase [EC:1.13.12.16] Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
Putative oxidoreductase id=4177890 bin=GWC2_Methylomirabilis_70_16 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
2-nitropropane dioxygenase
13_1_20cm_3_scaffold_53_21
unknown

Not on your lists

14269..14943
DNA (675bp) protein (225aa)

This feature has no annotations

13_1_20cm_3_scaffold_53_22
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

14956..16062
DNA (1107bp) protein (369aa)
Alcohol dehydrogenase GroES domain protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FEY1_CONWI
Alcohol dehydrogenase GroES domain protein {ECO:0000313|EMBL:ADB51698.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" sourc
alcohol dehydrogenase GroES domain protein
13_1_20cm_3_scaffold_53_23
Frankia sp. CpI1-S, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16055..16930
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Frankia sp. CN3 RepID=G6HG03_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KJE25166.1}; TaxID=1502723 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CpI1-S.;"
hypothetical protein
13_1_20cm_3_scaffold_53_24
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(16914..18542)
DNA (1629bp) protein (543aa)
Diguanylate cyclase n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9AXC8_HERA2
Diguanylate cyclase {ECO:0000313|EMBL:ABX06848.1}; TaxID=316274 species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpetosiphon aurantiacus
diguanylate cyclase
13_1_20cm_3_scaffold_53_25
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

18628..18897
DNA (270bp) protein (90aa)
hypothetical protein n=1 Tax=Serinicoccus marinus RepID=UPI0003B6E77D
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
hypothetical protein
13_1_20cm_3_scaffold_53_26
unknown

Not on your lists

18894..19247
DNA (354bp) protein (118aa)

This feature has no annotations

13_1_20cm_3_scaffold_53_27
Brevundimonas abyssalis, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19703..20062)
DNA (360bp) protein (120aa)
Putative membrane protein n=1 Tax=Brevundimonas abyssalis TAR-001 RepID=U2Z8Q5_9CAUL
Putative membrane protein {ECO:0000313|EMBL:GAD57805.1}; TaxID=1391729 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas
hypothetical protein
13_1_20cm_3_scaffold_53_28
Mycobacterium llatzerense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20106..20399
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4F1R7_MODMB
Mycobacterium llatzerense strain CLUC14 Mllat_contig000039, whole genome shotgun sequence {ECO:0000313|EMBL:KIU14658.1}; TaxID=280871 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteria
hypothetical protein
13_1_20cm_3_scaffold_53_29
Mycobacterium smegmatis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20401..21939
DNA (1539bp) protein (513aa)
histidine kinase n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B74FEF
Putative two-component histidine kinase {ECO:0000313|EMBL:ELQ90066.1}; TaxID=1214915 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium smeg
histidine kinase
13_1_20cm_3_scaffold_53_30
Frankia sp. QA3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21936..23393)
DNA (1458bp) protein (486aa)
FAD/FMN-dependent dehydrogenase n=1 Tax=Frankia sp. QA3 RepID=I9A6H4_9ACTO rbh
FAD/FMN-dependent dehydrogenase {ECO:0000313|EMBL:EIV95031.1}; TaxID=710111 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. QA3.;"
lipoprotein
Displaying items 1-30 of 125 in total

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