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13_1_20cm_3_scaffold_5850

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_5850_1
uncultured verrucomicrobium HF0500_18J03, Verrucomicrobia, Bacteria

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60..983
DNA (924bp) protein (308aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000
Shikimate dehydrogenase n=1 Tax=uncultured verrucomicrobium HF0500_18J03 RepID=E7C598_9BACT
shikimate dehydrogenase
13_1_20cm_3_scaffold_5850_2
Thauera sp. MZ1T, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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1029..1820
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Thauera sp. (strain MZ1T) RepID=B8F0B8_THASP
Uncharacterized protein {ECO:0000313|EMBL:ACK55084.1}; TaxID=85643 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. (strain MZ1T).;"
hypothetical protein
13_1_20cm_3_scaffold_5850_3
BJP_IG2102_Syntrophobacterales_60_12, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1817..2644)
DNA (828bp) protein (276aa)
pyrroline-5-carboxylate reductase (EC:1.5.1.2)
Pyrroline-5-carboxylate reductase id=4495472 bin=GWC2_Pelobacter_58_13 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=BJP_IG2102_Syntrophobacterales_60_12
13_1_20cm_3_scaffold_5850_4
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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2666..3616
DNA (951bp) protein (317aa)
Quinolinate synthase {ECO:0000256|SAAS:SAAS00096027}; EC=2.5.1.72 {ECO:0000256|SAAS:SAAS00096027};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniob
Quinolinate synthetase complex, A subunit n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZL3_9BACT
quinolinate synthetase
13_1_20cm_3_scaffold_5850_5
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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3736..4887
DNA (1152bp) protein (384aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CYF8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY20499.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
13_1_20cm_3_scaffold_5850_6
Pyrococcus sp. NA2, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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4884..5918
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=Pyrococcus sp. (strain NA2) RepID=F4HK78_PYRSN
Uncharacterized protein {ECO:0000313|EMBL:AEC52566.1}; TaxID=342949 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus.;" source="Pyrococcus sp. (strain NA2).;"
putative peptidase M19 family protein
13_1_20cm_3_scaffold_5850_7
unknown

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comp(6039..6248)
DNA (210bp) protein (70aa)

This feature has no annotations

13_1_20cm_3_scaffold_5850_8
Methylacidiphilum fumariolicum, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

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6437..7354
DNA (918bp) protein (306aa)
Ysh1p: subunit of polyadenylation factor I, putative n=1 Tax=Verrucomicrobium spinosum RepID=UPI00017466CC
Predicted exonuclease of the beta-lactamase fold involved in RNA processing {ECO:0000313|EMBL:CCG91385.1}; TaxID=1156937 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiph
beta-lactamase
13_1_20cm_3_scaffold_5850_9
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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7424..8191
DNA (768bp) protein (256aa)
xth; exodeoxyribonuclease III (EC:3.1.11.2)
Exodeoxyribonuclease III n=2 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q091G1_STIAD rbh
Exodeoxyribonuclease III {ECO:0000313|EMBL:KFA89899.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="C
13_1_20cm_3_scaffold_5850_10
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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8303..10141
DNA (1839bp) protein (613aa)
hypothetical protein Tax=CSP1_2_Dadabacteria
hypothetical protein id=14425464 bin=bin1_lowGC species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=bin1_lowGC organism_group=Unknown_CP rbh
hypothetical protein
13_1_20cm_3_scaffold_5850_11
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

10295..10864
DNA (570bp) protein (190aa)
hypothetical protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI000174536F
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:EDY20358.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus El
erfK; hypothetical protein
13_1_20cm_3_scaffold_5850_12
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

10901..11119
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D009_9BACT
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
infA; translation initiation factor IF-1
13_1_20cm_3_scaffold_5850_13
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

11278..11604
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D008_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY20322.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
13_1_20cm_3_scaffold_5850_14
unknown

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11556..11972
DNA (417bp) protein (139aa)

This feature has no annotations

13_1_20cm_3_scaffold_5850_15
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

11930..12331
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D006_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY20320.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
13_1_20cm_3_scaffold_5850_16
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

12559..13008
DNA (450bp) protein (150aa)
Thioredoxin domain-containing protein n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1J1H9_9BACT
trxA; Thiol-disulfide isomerase or thioredoxin Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
thioredoxin
13_1_20cm_3_scaffold_5850_17
Jeotgalibacillus sp. D5, Jeotgalibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13005..13922
DNA (918bp) protein (306aa)
hypothetical protein n=1 Tax=Brevibacillus sp. phR RepID=UPI000304A38B
Uncharacterized protein {ECO:0000313|EMBL:AJD92912.1}; TaxID=1508404 species="Bacteria; Firmicutes; Bacilli; Bacillales; Planococcaceae; Jeotgalibacillus.;" source="Jeotgalibacillus sp. D5.;"
hypothetical protein
13_1_20cm_3_scaffold_5850_18
Paenibacillus sp. MSt1, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13954..14760
DNA (807bp) protein (269aa)
fumarylacetoacetase (EC:3.7.1.2)
fumarylacetoacetase n=1 Tax=Paenibacillus elgii RepID=UPI000248C7A3
Fumarylacetoacetase {ECO:0000313|EMBL:KEQ23009.1}; TaxID=1501230 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. MSt1.;"
Displaying 18 items

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