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13_1_20cm_3_scaffold_586

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_586_1
RBG_19FT_COMBO_Chloroflexi_49_13_curated, Chloroflexi, Bacteria

Not on your lists

comp(3..563)
DNA (561bp) protein (187aa)
hypothetical protein n=1 Tax=Burkholderia sp. JPY347 RepID=UPI0003759258
TadE family protein Tax=RBG_19FT_COMBO_Chloroflexi_49_13_curated
13_1_20cm_3_scaffold_586_2
unknown

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593..1372
DNA (780bp) protein (260aa)

This feature has no annotations

13_1_20cm_3_scaffold_586_3
Acetohalobium arabaticum, Acetohalobium, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1857..2366
DNA (510bp) protein (170aa)
Type II secretion system F domain protein n=1 Tax=Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) RepID=D9QTM3_ACEAZ
Type II secretion system F domain protein {ECO:0000313|EMBL:ADL11787.1}; Flags: Precursor;; TaxID=574087 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halobacteroidaceae; Acetohalobium.;
type II secretion system F domain protein
13_1_20cm_3_scaffold_586_4
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

2377..3627
DNA (1251bp) protein (417aa)
Type II secretion system protein n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5USS7_ROSS1
Type II secretion system protein {ECO:0000313|EMBL:ABQ89680.1}; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseif
type II secretion system protein
13_1_20cm_3_scaffold_586_5
R_Deltaproteobacteria_44_53, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3629..3994)
DNA (366bp) protein (122aa)
yqeL; Iojap-like protein; K09710 ribosome-associated protein Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_44_53_curated
iojap family protein; K09710 ribosome-associated protein id=14630316 bin=bin8_Chloro species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
iojap-like protein
13_1_20cm_3_scaffold_586_6
Ammonifex degensii, Ammonifex, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4001..4594)
DNA (594bp) protein (198aa)
Probable nicotinate-nucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; EC=2.7.7.18 {ECO:0000256|HAMAP-Rule:MF_00244};; Deamido-NAD(+) diphosphorylase {ECO:0000256|HAMAP-Rule:MF_00244};
nicotinate (nicotinamide) nucleotide adenylyltransferase (EC:2.7.7.18)
Probable nicotinate-nucleotide adenylyltransferase n=1 Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9RAT5_AMMDK
13_1_20cm_3_scaffold_586_7
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(4602..5705)
DNA (1104bp) protein (368aa)
GTPase Obg n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=OBG_THERP
GTPase obg; K03979 GTP-binding protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
putative GTPase
13_1_20cm_3_scaffold_586_8
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists


comp(5860..6129)
DNA (270bp) protein (90aa)
50S ribosomal protein L25; K02899 large subunit ribosomal protein L27 Tax=CSP1_3_Armatimonadetes
50S ribosomal protein L25; K02899 large subunit ribosomal protein L27 id=14632396 bin=bin9_gal15 species=Oceanithermus profundus genus=Oceanithermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=bin9_gal15 organism_group=GAL15
rpmA; 50S ribosomal protein L27
13_1_20cm_3_scaffold_586_9
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists


comp(6133..6627)
DNA (495bp) protein (165aa)
50S ribosomal protein L21 (EC:2.3.1.61)
50S ribosomal protein L21 n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TNN8_9CHLR
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedono
13_1_20cm_3_scaffold_586_10
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

Not on your lists

comp(6652..7764)
DNA (1113bp) protein (371aa)
Cell shape-determining protein RodA n=1 Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=Q3A5R2_PELCD
rod shape-determining protein RodA; K05837 rod shape determining protein RodA Tax=RBG_16_Chloroflexi_64_32_curated
rodA; cell shape-determining protein RodA
13_1_20cm_3_scaffold_586_11
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(7761..9638)
DNA (1878bp) protein (626aa)
penicillin-binding protein 2 (EC:2.4.1.129); K05515 penicillin-binding protein 2 id=15189322 bin=GWE1_Berkelbacteria_39_12 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWE1_Berkelbacteria_39_12 organism_group=ACD58 (Berkelbacteria) organism_desc=Complete genome (ACD58 lineage)
mrdA; penicillin-binding protein 2; K05515 penicillin-binding protein 2 Tax=RBG_16_Chloroflexi_68_14_curated
mrdA; penicillin-binding protein 2 MrdA
13_1_20cm_3_scaffold_586_12
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(9635..10126)
DNA (492bp) protein (164aa)
Rod shape-determining protein MreD n=1 Tax=uncultured bacterium RepID=K1ZK10_9BACT
rod shape-determining protein MreD Tax=RBG_16_RIF_CHLX_72_14_curated
hypothetical protein
13_1_20cm_3_scaffold_586_13
RBG_16_Chloroflexi_64_43_curated, Chloroflexi, Bacteria

Not on your lists

comp(10123..10938)
DNA (816bp) protein (272aa)
Cell shape-determining protein MreC n=1 Tax=Selenomonas artemidis F0399 RepID=E7MZB6_9FIRM
mreC; rod shape-determining protein MreC; K03570 rod shape-determining protein MreC Tax=RBG_16_Chloroflexi_64_43_curated
rod shape-determining protein MreC
13_1_20cm_3_scaffold_586_14
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(10939..11967)
DNA (1029bp) protein (343aa)
MreB/Mrl family cell shape determining protein; K03569 rod shape-determining protein MreB and related proteins Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
rod shape-determining protein MreB; K03569 rod shape-determining protein MreB and related proteins id=14628399 bin=bin8_Chloro species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
rod shape-determining protein MreB
13_1_20cm_3_scaffold_586_15
unknown

Not on your lists

comp(12086..12895)
DNA (810bp) protein (270aa)

This feature has no annotations

13_1_20cm_3_scaffold_586_16
Eimeria tenella, Eimeria, Eucoccidiorida, Coccidia, Apicomplexa, Eukaryota

Not on your lists

comp(12892..14517)
DNA (1626bp) protein (542aa)
Uncharacterized protein (Fragment) n=1 Tax=Eimeria tenella RepID=U6KYS8_EIMTE
Uncharacterized protein {ECO:0000313|EMBL:CDJ40660.1}; Flags: Fragment;; TaxID=5802 species="Eukaryota; Alveolata; Apicomplexa; Conoidasida; Coccidia; Eucoccidiorida; Eimeriorina; Eimeriidae; Eimeria.
13_1_20cm_3_scaffold_586_17
Eimeria tenella, Eimeria, Eucoccidiorida, Coccidia, Apicomplexa, Eukaryota

Not on your lists

comp(14514..16169)
DNA (1656bp) protein (552aa)
Uncharacterized protein (Fragment) n=1 Tax=Eimeria tenella RepID=U6KYS8_EIMTE
Uncharacterized protein {ECO:0000313|EMBL:CDJ40660.1}; Flags: Fragment;; TaxID=5802 species="Eukaryota; Alveolata; Apicomplexa; Conoidasida; Coccidia; Eucoccidiorida; Eimeriorina; Eimeriidae; Eimeria.
GK21250 gene product from transcript GK21250-RA
13_1_20cm_3_scaffold_586_18
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(16188..18755)
DNA (2568bp) protein (856aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|H
Valine--tRNA ligase n=2 Tax=Geobacter metallireducens RepID=Q39X26_GEOMG
valS; valyl-tRNA ligase
13_1_20cm_3_scaffold_586_19
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

comp(18834..20111)
DNA (1278bp) protein (426aa)
ATP-dependent Clp protease ATP-binding subunit ClpX; K03544 ATP-dependent Clp protease ATP-binding subunit ClpX Tax=CSP1_4_Chloroflexi
ATP-dependent Clp protease ATP-binding subunit ClpX; K03544 ATP-dependent Clp protease ATP-binding subunit ClpX id=14628678 bin=bin8_Chloro species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
clpX; ATP-dependent protease ATP-binding subunit ClpX
13_1_20cm_3_scaffold_586_20
unknown

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comp(20143..20337)
DNA (195bp) protein (65aa)

This feature has no annotations

13_1_20cm_3_scaffold_586_21
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20334..20993)
DNA (660bp) protein (220aa)
ATP-dependent Clp protease proteolytic subunit (EC:3.4.21.92); K01358 ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
ATP-dependent Clp protease proteolytic subunit ClpP (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9RYS7_THEOJ
13_1_20cm_3_scaffold_586_22
Desulfotomaculum kuznetsovii, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21050..22372)
DNA (1323bp) protein (441aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-R
Trigger factor n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CP83_DESK7
trigger factor Tig
13_1_20cm_3_scaffold_586_23
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

comp(22421..23302)
DNA (882bp) protein (294aa)
1A family penicillin-binding protein Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
hau:Haur_3225 1A family penicillin-binding protein id=86421 bin=ACD58 species=ACD58 genus=ACD58 taxon_order=ACD58 taxon_class=ACD58 phylum=ACD58 tax=ACD58 organism_group=ACD58 (Berkelbacteria) organism_desc=ACD58
putative penicillin-binding protein
Displaying 23 items

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