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13_1_20cm_3_scaffold_6579

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_6579_1
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(3..458)
DNA (456bp) protein (152aa)
trpS; tryptophanyl-tRNA synthetase (EC:6.1.1.2); K01867 tryptophanyl-tRNA synthetase [EC:6.1.1.2] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Tryptophan--tRNA ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6T3_GEMAT
Tryptophan-tRNA ligase, bacterial-type
13_1_20cm_3_scaffold_6579_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

489..1325
DNA (837bp) protein (279aa)
SuhB inositol monophosphatase (Extragenic suppressor protein) n=1 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82TE3_NITEU
Inositol monophosphatase {ECO:0000313|EMBL:AHG90335.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
inositol monophosphatase
13_1_20cm_3_scaffold_6579_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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1322..2845
DNA (1524bp) protein (508aa)
Formiminotransferase-cyclodeaminase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6T1_GEMAT
Glutamate formiminotransferase {ECO:0000313|EMBL:AHG90334.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
glutamate formiminotransferase
13_1_20cm_3_scaffold_6579_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(2842..3600)
DNA (759bp) protein (253aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974
Methionine aminopeptidase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6S7_GEMAT
methionine aminopeptidase, type I
13_1_20cm_3_scaffold_6579_5
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(3597..4310)
DNA (714bp) protein (238aa)
Adenylate kinase {ECO:0000255|HAMAP-Rule:MF_00235}; Short=AK {ECO:0000255|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000255|HAMAP-Rule:MF_00235};; ATP-AMP transphosphorylase {ECO:0000255|HAMAP-Rule:MF_00
adk; adenylate kinase (EC:2.7.4.3)
Adenylate kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=KAD_GEMAT
13_1_20cm_3_scaffold_6579_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists


comp(4362..5636)
DNA (1275bp) protein (425aa)
Protein translocase subunit SecY n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6S5_GEMAT
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Protein translocase subunit SecY
13_1_20cm_3_scaffold_6579_7
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists


comp(5637..5912)
DNA (276bp) protein (92aa)
50S ribosomal protein L15 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6S4_GEMAT
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" sourc
rplO; 50S ribosomal protein L15
13_1_20cm_3_scaffold_6579_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists


comp(6165..6416)
DNA (252bp) protein (84aa)
50S ribosomal protein L30 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6S3_GEMAT
50S ribosomal protein L30 {ECO:0000256|SAAS:SAAS00082687}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
ribosomal protein L30
13_1_20cm_3_scaffold_6579_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists


comp(6409..7200)
DNA (792bp) protein (264aa)
30S ribosomal protein S5 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6S2_GEMAT
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
ribosomal protein S5 rbh
13_1_20cm_3_scaffold_6579_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists


comp(7204..7560)
DNA (357bp) protein (119aa)
50S ribosomal protein L18 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6S1_GEMAT
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
ribosomal protein L18
13_1_20cm_3_scaffold_6579_11
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists


comp(7560..8099)
DNA (540bp) protein (180aa)
50S ribosomal protein L6 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RL6_GEMAT
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Ribosomal protein L6, subgroup
13_1_20cm_3_scaffold_6579_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists


comp(8116..8490)
DNA (375bp) protein (125aa)
30S ribosomal protein S8 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6R9_GEMAT
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
ribosomal protein S8
13_1_20cm_3_scaffold_6579_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists


comp(8547..8732)
DNA (186bp) protein (62aa)
30S ribosomal protein S14 type Z n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0LHN9_9BACT
rpsN; 30S ribosomal protein S14; K02954 small subunit ribosomal protein S14 Tax=RBG_16_Gemmatimonadetes_66_8_curated
30S ribosomal protein S14
13_1_20cm_3_scaffold_6579_14
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists


comp(8789..9445)
DNA (657bp) protein (219aa)
50S ribosomal protein L5 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6R7_GEMAT
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Ribosomal protein L5
13_1_20cm_3_scaffold_6579_15
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists


comp(9461..9880)
DNA (420bp) protein (140aa)
50S ribosomal protein L24 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6R6_GEMAT
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
ribosomal protein L24
13_1_20cm_3_scaffold_6579_16
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists


comp(9882..10124)
DNA (243bp) protein (81aa)
50S ribosomal protein L14 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RL14_GEMAT
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
ribosomal protein L14
13_1_20cm_3_scaffold_6579_17
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists


comp(10453..10752)
DNA (300bp) protein (100aa)
50S ribosomal protein L29 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RL29_GEMAT
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
50S ribosomal protein L29
13_1_20cm_3_scaffold_6579_18
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists


comp(10742..10891)
DNA (150bp) protein (50aa)
50S ribosomal protein L16 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RL16_GEMAT
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
50S ribosomal protein L16
13_1_20cm_3_scaffold_6579_19
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists


comp(10879..11106)
DNA (228bp) protein (76aa)
50S ribosomal protein L16 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RL16_GEMAT
50S ribosomal protein L16 {ECO:0000255|HAMAP-Rule:MF_01342}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (str
rplP; 50S ribosomal protein L16
13_1_20cm_3_scaffold_6579_20
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists


comp(11119..11571)
DNA (453bp) protein (151aa)
30S ribosomal protein S3 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RS3_GEMAT
rpsC; 30S ribosomal protein S3; K02982 small subunit ribosomal protein S3 Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
rpsC; 30S ribosomal protein S3
Displaying 20 items

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