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13_1_20cm_3_scaffold_8305

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_8305_1
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(3..1139)
DNA (1137bp) protein (379aa)
polynucleotide adenylyltransferase; K00974 tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] Tax=RBG_16_Actinobacteria_68_12_curated
Polynucleotide adenylyltransferase region n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F083_CONWI
polynucleotide adenylyltransferase
13_1_20cm_3_scaffold_8305_2

Not on your lists

comp(1330..1569)
DNA (240bp) protein (80aa)
imidazole glycerol phosphate synthase n=1 Tax=Methyloversatilis universalis RepID=UPI000374CF42
Uncharacterized protein {ECO:0000313|EMBL:KKK47238.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
imidazole glycerol phosphate synthase subunit hisf
13_1_20cm_3_scaffold_8305_3

Not on your lists

comp(1511..2002)
DNA (492bp) protein (164aa)
Imidazole glycerol phosphate synthase subunit HisF n=1 Tax=Patulibacter medicamentivorans RepID=H0E794_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KKK47238.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Imidazole glycerol phosphate synthase cyclase subunit
13_1_20cm_3_scaffold_8305_4
Actinocorallia aurantiaca, Actinocorallia, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2013..2633)
DNA (621bp) protein (207aa)
Methyltransferase n=1 Tax=Actinocorallia aurantiaca RepID=B8YGP7_9ACTO
Methyltransferase {ECO:0000313|EMBL:ACL80147.1}; TaxID=46204 species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Actinocorallia.;" source="Actinocorallia aurantiaca.;"
hypothetical protein
13_1_20cm_3_scaffold_8305_5
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(2777..3505)
DNA (729bp) protein (243aa)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658}; EC=5.3.1.16 {ECO:0000256|HAMAP-Rule
phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC:5.3.1.16)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Patulibacter medicamentivorans RepID=H0E795_9ACTN rbh
13_1_20cm_3_scaffold_8305_6
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(3502..3942)
DNA (441bp) protein (147aa)
Imidazole glycerol phosphate synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00278};; IGP synthase glutamine amidotransferase subunit {ECO:0000256|HAMAP-
Imidazole glycerol phosphate synthase subunit HisH n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F087_CONWI
imidazole glycerol phosphate synthase, glutamine amidotransferase subunit
13_1_20cm_3_scaffold_8305_7
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(3942..4076)
DNA (135bp) protein (45aa)
Imidazole glycerol phosphate synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00278};; IGP synthase glutamine amidotransferase subunit {ECO:0000256|HAMAP-
Imidazole glycerol phosphate synthase subunit HisH n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F087_CONWI
imidazole glycerol phosphate synthase, glutamine amidotransferase subunit
13_1_20cm_3_scaffold_8305_8
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(4073..4663)
DNA (591bp) protein (197aa)
Imidazoleglycerol-phosphate dehydratase {ECO:0000256|HAMAP-Rule:MF_00076, ECO:0000256|SAAS:SAAS00218099}; Short=IGPD {ECO:0000256|HAMAP-Rule:MF_00076};; EC=4.2.1.19 {ECO:0000256|HAMAP-Rule:MF_00076, E
imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19)
Imidazoleglycerol-phosphate dehydratase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F088_CONWI
13_1_20cm_3_scaffold_8305_9
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(4660..5619)
DNA (960bp) protein (320aa)
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-R
histidinol dehydrogenase (EC:1.1.1.23)
Histidinol dehydrogenase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F089_CONWI
13_1_20cm_3_scaffold_8305_10
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(5810..6454)
DNA (645bp) protein (215aa)
ATP phosphoribosyltransferase (EC:2.4.2.17)
ATP phosphoribosyltransferase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F090_CONWI
ATP phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01018, ECO:0000256|SAAS:SAAS00046302}; Short=ATP-PRT {ECO:0000256|HAMAP-Rule:MF_01018};; Short=ATP-PRTase {ECO:0000256|HAMAP-Rule:MF_01018};; E
13_1_20cm_3_scaffold_8305_11
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(6451..7428)
DNA (978bp) protein (326aa)
histidyl-tRNA synthetase 2 (EC:6.1.1.21)
ATP phosphoribosyltransferase regulatory subunit n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F091_CONWI
ATP phosphoribosyltransferase regulatory subunit {ECO:0000256|HAMAP-Rule:MF_00125, ECO:0000256|SAAS:SAAS00089029}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales;
13_1_20cm_3_scaffold_8305_12
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(7462..8820)
DNA (1359bp) protein (453aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylp
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F092_CONWI rbh
UDP-N-acetylglucosamine1-carboxyvinyltransferase
13_1_20cm_3_scaffold_8305_13
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

8862..9446
DNA (585bp) protein (195aa)
Metal dependent phosphohydrolase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F093_CONWI
Metal dependent phosphohydrolase {ECO:0000313|EMBL:ADB51953.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexib
metal dependent phosphohydrolase
13_1_20cm_3_scaffold_8305_14
Rhodococcus jostii, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9506..9904
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Rhodococcus sp. (strain RHA1) RepID=Q0RVI7_RHOSR
Uncharacterized protein {ECO:0000313|EMBL:ABH00699.1}; TaxID=101510 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus jostii (strain RHA1).;"
hypothetical protein
13_1_20cm_3_scaffold_8305_15
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

10295..11392
DNA (1098bp) protein (366aa)
Isocitrate dehydrogenase [NAD] {ECO:0000313|EMBL:EHN11790.1}; EC=1.1.1.41 {ECO:0000313|EMBL:EHN11790.1};; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulib
Isocitrate dehydrogenase [NAD] n=1 Tax=Patulibacter medicamentivorans RepID=H0E3F7_9ACTN rbh
isocitrate/isopropylmalate dehydrogenase
13_1_20cm_3_scaffold_8305_16
Agrobacterium rubi, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11389..11658)
DNA (270bp) protein (90aa)
Putative uncharacterized protein n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F4M9_ACIC5
Uncharacterized protein {ECO:0000313|EMBL:GAK69037.1}; TaxID=1220582 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;"
hypothetical protein
13_1_20cm_3_scaffold_8305_17
Streptomyces lydicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11648..12082)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2P921_9ACTO
4-hydroxybenzoyl-CoA thioesterase {ECO:0000313|EMBL:AJT62056.1}; TaxID=1403539 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces lydicus A02.
4-hydroxybenzoyl-CoA thioesterase
13_1_20cm_3_scaffold_8305_18
unknown

Not on your lists

12157..12486
DNA (330bp) protein (110aa)

This feature has no annotations

13_1_20cm_3_scaffold_8305_19
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12533..12964)
DNA (432bp) protein (144aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI00037C0940
Glyoxalase {ECO:0000313|EMBL:EWY39232.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens
hypothetical protein
13_1_20cm_3_scaffold_8305_20
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(13011..13919)
DNA (909bp) protein (303aa)
Helix-turn-helix, AraC domain protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FDS9_CONWI
Helix-turn-helix, AraC domain protein {ECO:0000313|EMBL:ADB49653.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Co
AraC family transcriptional regulator
13_1_20cm_3_scaffold_8305_21
Planctopirus limnophila, Planctopirus, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(13950..14243)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Planctomyces limnophilus (strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290) RepID=D5SUE0_PLAL2
Uncharacterized protein {ECO:0000313|EMBL:ADG69193.1}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnoph
hypothetical protein
Displaying 21 items

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