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13_1_20cm_3_scaffold_88

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_88_1
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

1..1092
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D897_9BACT
lolE; ABC transporter permease; K09808 lipoprotein-releasing system permease protein Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
lolE; ABC transporter permease
13_1_20cm_3_scaffold_88_2
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1128..1487)
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Methylomicrobium album BG8 RepID=H8GRK2_METAL
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
hypothetical protein
13_1_20cm_3_scaffold_88_3
Mastigocladus laminosus, Mastigocladus, Stigonematales, Cyanobacteria, Bacteria

Not on your lists

comp(1552..1938)
DNA (387bp) protein (129aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00037C6819
Cupin {ECO:0000313|EMBL:KIY09427.1}; TaxID=1594576 species="Bacteria; Cyanobacteria; Stigonematales; Mastigocladus.;" source="Mastigocladus laminosus UU774.;"
cyclic nucleotide-binding protein
13_1_20cm_3_scaffold_88_4
RLO_PLX_64_10, Bacteria

Not on your lists

comp(2002..2547)
DNA (546bp) protein (182aa)
Cupin 2 conserved barrel domain protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CWL1_9BACT
cupin Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
cupin
13_1_20cm_3_scaffold_88_5
RLO_PLX_64_10, Bacteria

Not on your lists

comp(2569..3069)
DNA (501bp) protein (167aa)
Cupin 2 conserved barrel domain protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CWL1_9BACT
cupin Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
cupin
13_1_20cm_3_scaffold_88_6
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(3101..3355)
DNA (255bp) protein (85aa)
hypothetical protein n=1 Tax=Sandarakinorhabdus limnophila RepID=UPI0003B6D1D4
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_20cm_3_scaffold_88_7
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(3377..4294)
DNA (918bp) protein (306aa)
DNA primase-like protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IMN6_KORVE
DNA primase-like protein {ECO:0000313|EMBL:ABF41864.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (stra
DNA primase-like protein
13_1_20cm_3_scaffold_88_8
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(4354..5541)
DNA (1188bp) protein (396aa)
Tetraacyldisaccharide 4'-kinase {ECO:0000256|HAMAP-Rule:MF_00409, ECO:0000256|SAAS:SAAS00093884}; EC=2.7.1.130 {ECO:0000256|HAMAP-Rule:MF_00409, ECO:0000256|SAAS:SAAS00093878};; Lipid A 4'-kinase {ECO
Tetraacyldisaccharide 4'-kinase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D1X3_9BACT
tetraacyldisaccharide 4'-kinase
13_1_20cm_3_scaffold_88_9
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(5568..6479)
DNA (912bp) protein (304aa)
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00129832}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00384};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00384};; EC=2.7.1.39 {ECO:0000256|
Homoserine kinase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D1X4_9BACT
thrB; homoserine kinase
13_1_20cm_3_scaffold_88_10
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

6612..7523
DNA (912bp) protein (304aa)
SAM-dependent methyltransferase-like protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CUH2_9BACT
SAM-dependent methyltransferase-like protein {ECO:0000313|EMBL:EDY22210.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
SAM-dependent methyltransferase
13_1_20cm_3_scaffold_88_11
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

7505..7858
DNA (354bp) protein (118aa)
hypothetical protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI00017446DF
Uncharacterized protein {ECO:0000313|EMBL:EDY20929.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
13_1_20cm_3_scaffold_88_12
Photobacterium gaetbulicola, Photobacterium, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7888..8097)
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Magnetospirillum sp. SO-1 RepID=M2ZKU8_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KHT62092.1}; TaxID=1295392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Photobacterium.;" source="Photobacterium gaetbul
hypothetical protein
13_1_20cm_3_scaffold_88_13
unknown

Not on your lists

8328..8765
DNA (438bp) protein (146aa)

This feature has no annotations

13_1_20cm_3_scaffold_88_14
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

8796..9965
DNA (1170bp) protein (390aa)
Tyrosine--tRNA ligase {ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|SAAS:SAAS00105716};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniob
tyrosyl-tRNA synthetase (EC:6.1.1.1)
Tyrosyl-tRNA synthetase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D0P4_9BACT
13_1_20cm_3_scaffold_88_15
unknown

Not on your lists

comp(10023..10499)
DNA (477bp) protein (159aa)

This feature has no annotations

13_1_20cm_3_scaffold_88_16
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(10625..11275)
DNA (651bp) protein (217aa)
ATP-dependent dethiobiotin synthetase BioD {ECO:0000256|HAMAP-Rule:MF_00336}; EC=6.3.3.3 {ECO:0000256|HAMAP-Rule:MF_00336};; DTB synthetase {ECO:0000256|HAMAP-Rule:MF_00336}; Dethiobiotin synthase {EC
dethiobiotin synthase (EC:6.3.3.3)
ATP-dependent dethiobiotin synthetase BioD n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D2A8_9BACT
13_1_20cm_3_scaffold_88_17
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(11272..12006)
DNA (735bp) protein (245aa)
phosphoribosylformylglycinamidine synthase 1 (EC:6.3.5.3); K01952 phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
Phosphoribosylformylglycinamidine synthase 1 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CVY2_9BACT
purQ; phosphoribosylformylglycinamidine synthase I
13_1_20cm_3_scaffold_88_18
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(12015..12197)
DNA (183bp) protein (61aa)
hypothetical protein n=1 Tax=Cytophagales str. B6 RepID=UPI0003B5190C
Uncharacterized protein {ECO:0000313|EMBL:EDY21575.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
13_1_20cm_3_scaffold_88_19
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(12200..12541)
DNA (342bp) protein (114aa)
Phosphoribosylformylglycinamidine synthase subunit PurS {ECO:0000256|HAMAP-Rule:MF_01926}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_01926};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_01926};; Formyl
phosphoribosylformylglycinamidine synthase subunit PurS (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase, purS n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CVY4_9BACT
13_1_20cm_3_scaffold_88_20
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(12582..14759)
DNA (2178bp) protein (726aa)
putative amylo-alpha-1,6-glucosidase (EC:3.2.1.33) Tax=CSP1_5_NC10
putative amylo-alpha-1,6-glucosidase (EC:3.2.1.33) id=14430921 bin=bin3_NC10 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin3_NC10 organism_group=NC10 rbh
putative amylo-alpha-1,6-glucosidase (EC:3.2.1.33)
13_1_20cm_3_scaffold_88_21
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(14875..16611)
DNA (1737bp) protein (579aa)
DNA polymerase LigD, ligase domain protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XDC4_9BACT rbh
DNA polymerase LigD, ligase domain protein {ECO:0000313|EMBL:EEF62070.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedospha
DNA ligase D
13_1_20cm_3_scaffold_88_22
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(16693..17298)
DNA (606bp) protein (202aa)
elongation factor Ts n=1 Tax=Verrucomicrobium spinosum RepID=UPI000174529D
translation elongation factor Ts; K02357 elongation factor Ts Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
translation elongation factor Ts
13_1_20cm_3_scaffold_88_23
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists


comp(17389..18120)
DNA (732bp) protein (244aa)
30S ribosomal protein S2 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D1W8_9BACT
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
30S ribosomal protein S2
13_1_20cm_3_scaffold_88_24
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18220..18732)
DNA (513bp) protein (171aa)
hypothetical protein n=1 Tax=Ralstonia solanacearum RepID=UPI0001816CB3
Uncharacterized protein {ECO:0000313|EMBL:AEG71691.1}; TaxID=1031711 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacear
hypothetical protein
13_1_20cm_3_scaffold_88_25
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18699..19607)
DNA (909bp) protein (303aa)
probable thiamine biosynthesis lipoprotein apbe precursor transmembrane n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001745D98
apbe-like lipoprotein; K03734 thiamine biosynthesis lipoprotein Tax=RBG_16_Gamma2_60_9_curated
putative ApbE-like lipoprotein
13_1_20cm_3_scaffold_88_26
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19588..20127)
DNA (540bp) protein (180aa)
FMN-binding domain protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X0Z9_THIK1
FMN-binding domain protein {ECO:0000313|EMBL:ADG30795.1}; Flags: Precursor;; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermed
FMN-binding domain-containing protein
13_1_20cm_3_scaffold_88_27
Bradyrhizobium sp. ORS 285, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20150..21394)
DNA (1245bp) protein (415aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0S5X4_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCD89601.1}; TaxID=115808 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp.
hypothetical protein
13_1_20cm_3_scaffold_88_28
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(21652..21897)
DNA (246bp) protein (82aa)
ATP/cobalamin adenosyltransferase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D3G2_9BACT
ATP/cobalamin adenosyltransferase {ECO:0000313|EMBL:EDY18792.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
ATP/cobalamin adenosyltransferase
Displaying 28 items

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