ggKbase home page

13_1_20cm_3_scaffold_94

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_94_1
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

2..283
DNA (282bp) protein (94aa)
Thioesterase domain protein n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F7I2_ACIC5
Thioesterase domain protein {ECO:0000313|EMBL:ACO32386.1}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsulatum (stra
thioesterase domain-containing protein
13_1_20cm_3_scaffold_94_2
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

388..1944
DNA (1557bp) protein (519aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI0003698DB4
Uncharacterized protein {ECO:0000313|EMBL:ACO31365.1}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsulatum (strain A
hypothetical protein
13_1_20cm_3_scaffold_94_3
CG_CP01_01, CG_CP01, Bacteria

Not on your lists

1944..2279
DNA (336bp) protein (112aa)
CzcA family heavy metal efflux protein; K07787 Cu(I)/Ag(I) efflux system membrane protein CusA Tax=CG_CP01_01
13_1_20cm_3_scaffold_94_4
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(2599..3606)
DNA (1008bp) protein (336aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C46EB
hypothetical protein Tax=RBG_16_Planctomycetes_64_12_curated
hypothetical protein
13_1_20cm_3_scaffold_94_5
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

3861..4988
DNA (1128bp) protein (376aa)
Twitching motility protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ITU1_KORVE rbh
Twitching motility protein {ECO:0000313|EMBL:ABF39709.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (st
twitching motility protein
13_1_20cm_3_scaffold_94_6
unknown

Not on your lists

comp(5059..5448)
DNA (390bp) protein (130aa)

This feature has no annotations

13_1_20cm_3_scaffold_94_7
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

5568..6110
DNA (543bp) protein (181aa)
Regulatory protein RecX n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ITU2_KORVE
Regulatory protein RecX {ECO:0000256|HAMAP-Rule:MF_01114, ECO:0000256|SAAS:SAAS00093789}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" s
regulatory protein RecX
13_1_20cm_3_scaffold_94_8
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(6117..6953)
DNA (837bp) protein (279aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000374AA56
Cyclic nucleotide-binding protein {ECO:0000313|EMBL:ABJ86423.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibact
cyclic nucleotide-binding protein
13_1_20cm_3_scaffold_94_9
Granulicella tundricola, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists


7073..9961
DNA (2889bp) protein (963aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00037BE54D rbh
alanyl-tRNA synthetase
13_1_20cm_3_scaffold_94_10
unknown

Not on your lists

comp(9968..10324)
DNA (357bp) protein (119aa)

This feature has no annotations

13_1_20cm_3_scaffold_94_11
Tolypothrix bouteillei, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(10604..11572)
DNA (969bp) protein (323aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00036D14E3
Gluconolactonase {ECO:0000313|EMBL:KIE12453.1}; TaxID=1479485 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix bouteillei VB521301.;"
gluconolactonase
13_1_20cm_3_scaffold_94_12
Terriglobus saanensis, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(11591..12424)
DNA (834bp) protein (278aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036B4AD9
Cytochrome c class I {ECO:0000313|EMBL:ADV81252.1}; Flags: Precursor;; TaxID=401053 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus saanensis
class I cytochrome c
13_1_20cm_3_scaffold_94_13
Terriglobus saanensis, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

12672..14282
DNA (1611bp) protein (537aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036BDF50
PQQ-dependent enzyme-like protein {ECO:0000313|EMBL:ADV81251.1}; Flags: Precursor;; TaxID=401053 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglob
PQQ-dependent enzyme-like protein
13_1_20cm_3_scaffold_94_14
Streptomyces niveus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14321..14830
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Streptomyces niveus NCIMB 11891 RepID=V6JFE3_STRNV
Uncharacterized protein {ECO:0000313|EMBL:EST18622.1}; TaxID=1352941 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces niveus NCIMB 11891.;"
endoribonuclease L-PSP
13_1_20cm_3_scaffold_94_15
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

14847..16103
DNA (1257bp) protein (419aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003690DEB rbh
Selenocysteine synthase (Seryl-tRNASer selenium transferase)-like protein {ECO:0000313|EMBL:ACU63867.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobact
selenocysteine synthase (seryl-tRNASer selenium transferase)-like protein
13_1_20cm_3_scaffold_94_16
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(16110..18305)
DNA (2196bp) protein (732aa)
Galactose-binding superfamily protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IUL5_KORVE rbh
Galactose-binding superfamily protein {ECO:0000313|EMBL:ABF39435.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" sou
galactose-binding superfamily protein
13_1_20cm_3_scaffold_94_17
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

18389..19174
DNA (786bp) protein (262aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00038128E3 rbh
Glucosamine/galactosamine-6-phosphate isomerase {ECO:0000313|EMBL:ABF41910.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Kori
nagB; glucosamine-6-phosphate deaminase
13_1_20cm_3_scaffold_94_18
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

19237..21417
DNA (2181bp) protein (727aa)
Carbohydrate binding protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IP90_KORVE rbh
Carbohydrate binding protein {ECO:0000313|EMBL:ABF41310.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Kori
carbohydrate binding protein
13_1_20cm_3_scaffold_94_19
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

21509..22342
DNA (834bp) protein (278aa)
Polysaccharide deacetylase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRD3_KORVE
Polysaccharide deacetylase {ECO:0000313|EMBL:ABF40567.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koriba
polysaccharide deacetylase
13_1_20cm_3_scaffold_94_20
Granulicella tundricola, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

22369..23142
DNA (774bp) protein (258aa)
dimethylmenaquinone methyltransferase n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B560F7
Dimethylmenaquinone methyltransferase {ECO:0000313|EMBL:ADW71097.1}; TaxID=1198114 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella tundricol
dimethylmenaquinone methyltransferase
13_1_20cm_3_scaffold_94_21
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(23173..25119)
DNA (1947bp) protein (649aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00035F2393
transcriptional regulator domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
transcriptional regulator domain-containing protein
13_1_20cm_3_scaffold_94_22
unknown

Not on your lists

comp(25220..25336)
DNA (117bp) protein (39aa)

This feature has no annotations

Displaying 22 items

View Taxonomy