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13_1_20cm_4_scaffold_13

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Displaying items 1-30 of 99 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_13_1
unknown

Not on your lists

comp(1..69)
DNA (69bp) protein (23aa)

This feature has no annotations

13_1_20cm_4_scaffold_13_2
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(129..3158)
DNA (3030bp) protein (1010aa)
Transposase n=9 Tax=Bacteria RepID=A6VC86_PSEA7 rbh
Transposase Tn3 family protein {ECO:0000313|EMBL:ADV02204.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphi
transposase Tn3 family protein
13_1_20cm_4_scaffold_13_3
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3155..3733)
DNA (579bp) protein (193aa)
Resolvase domain n=9 Tax=Bacteria RepID=B2UC43_RALPJ rbh
DNA-invertase {ECO:0000313|EMBL:ABR85500.1}; TaxID=381754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa (stra
resolvase domain-containing protein
13_1_20cm_4_scaffold_13_4
Methylibium sp. T29, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3987..4265
DNA (279bp) protein (93aa)
Uncharacterized protein n=8 Tax=Bacteria RepID=B2UC44_RALPJ
Uncharacterized protein {ECO:0000313|EMBL:EWS52853.1}; TaxID=1430884 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29.;"
hypothetical protein
13_1_20cm_4_scaffold_13_5
Methylibium sp. T29, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4262..4546
DNA (285bp) protein (95aa)
Addiction module toxin, RelE/StbE family n=9 Tax=Bacteria RepID=B2UC45_RALPJ
Addiction module toxin, RelE/StbE family {ECO:0000313|EMBL:EWS52854.1}; TaxID=1430884 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29
stbE; plasmid stabilization protein ParE
13_1_20cm_4_scaffold_13_6
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6431..6649)
DNA (219bp) protein (73aa)
DNA invertase n=1 Tax=Escherichia coli RepID=UPI00037E27DC
tnpR; serine-based site-specific recombinase activity TnpR (resolvase) Tn6050 Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
tnpR; serine-based site-specific recombinase activity TnpR (resolvase) Tn6050
13_1_20cm_4_scaffold_13_7
Herbaspirillum sp. GW103, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6780..7769)
DNA (990bp) protein (330aa)
Uncharacterized protein n=32 Tax=Bacteria RepID=F8H2K7_PSEUT rbh
Diguanylate phosphodiesterase {ECO:0000313|EMBL:EIJ47562.1}; TaxID=1175306 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspir
urf-2; diguanylate phosphodiesterase
13_1_20cm_4_scaffold_13_8
Achromobacter sp. AO22, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7766..8002)
DNA (237bp) protein (79aa)
Uncharacterized mercuric resistance protein MerE n=55 Tax=Bacteria RepID=MERE_PSEAI
MerE {ECO:0000313|EMBL:ACH56219.1}; TaxID=554819 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter sp. AO22.;"
putative mercury resistance protein
13_1_20cm_4_scaffold_13_9
Cupriavidus metallidurans, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7999..8364)
DNA (366bp) protein (122aa)
Mercuric resistence transcriptional repressor protein MerD n=51 Tax=Bacteria RepID=A6UXG6_PSEA7
MerD from Tn4378, regulatory protein involved in Hg(II) resistance {ECO:0000313|EMBL:ABF13043.1}; MerD from Tn4380, regulatory protein involved in Hg(II) resistance {ECO:0000313|EMBL:ABF13034.1}; Puta
merD; transcriptional regulator MerD
13_1_20cm_4_scaffold_13_10
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8382..10067)
DNA (1686bp) protein (562aa)
Mercuric reductase {ECO:0000256|RuleBase:RU361223}; EC=1.16.1.1 {ECO:0000256|RuleBase:RU361223};; Hg(II) reductase {ECO:0000256|RuleBase:RU361223}; TaxID=550 species="Bacteria; Proteobacteria; Gammapr
Mercuric reductase n=17 Tax=Bacteria RepID=A6UXG5_PSEA7 rbh
merA; putative mercuric reductase
13_1_20cm_4_scaffold_13_11
Pseudomonas plecoglossicida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10139..10414)
DNA (276bp) protein (92aa)
Mercuric transport protein periplasmic component n=49 Tax=Bacteria RepID=A6UXG4_PSEA7
Periplasmic mercury ion-binding protein {ECO:0000256|RuleBase:RU361212}; TaxID=70775 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="P
merP2; mercuric transport periplasmic protein
13_1_20cm_4_scaffold_13_12
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10427..10777)
DNA (351bp) protein (117aa)
Mercuric transport protein n=37 Tax=Bacteria RepID=MERT_PSEAI
Mercuric transporter {ECO:0000313|EMBL:ERV82958.1}; TaxID=1402545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aerugino
putative mercuric transport protein
13_1_20cm_4_scaffold_13_13
Achromobacter piechaudii, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10849..11283
DNA (435bp) protein (145aa)
MerR from Tn4378, regulatory protein involved in Hg(II) resistance n=1 Tax=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) RepID=Q1L9H3_RALME
Transcriptional regulator MerR {ECO:0000313|EMBL:EJO30855.1}; TaxID=1156919 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobact
merR; putative transcriptional regulator MerR
13_1_20cm_4_scaffold_13_14
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11485..12393)
DNA (909bp) protein (303aa)
Transcriptional regulator, LysR family n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BXJ1_DELAS rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABX38267.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia ac
LysR family transcriptional regulator
13_1_20cm_4_scaffold_13_15
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12519..13271
DNA (753bp) protein (251aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BXJ2_DELAS rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ABX38268.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia a
short chain dehydrogenase
13_1_20cm_4_scaffold_13_16
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13446..14123
DNA (678bp) protein (226aa)
Glutathione S-transferase domain n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BXJ3_DELAS rbh
Glutathione S-transferase domain {ECO:0000313|EMBL:ABX38269.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovor
glutathione S-transferase domain-containing protein rbh
13_1_20cm_4_scaffold_13_17
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14203..15087)
DNA (885bp) protein (295aa)
Transcriptional regulator, LysR family n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BXJ4_DELAS rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABX38270.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia ac
LysR family transcriptional regulator
13_1_20cm_4_scaffold_13_18
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15221..16495
DNA (1275bp) protein (425aa)
Ribulose-bisphosphate carboxylase {ECO:0000313|EMBL:ABX38271.1}; EC=4.1.1.39 {ECO:0000313|EMBL:ABX38271.1};; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamo
Ribulose-bisphosphate carboxylase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BXJ5_DELAS rbh
RuBisCO-like protein rbh
13_1_20cm_4_scaffold_13_19
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16504..17913
DNA (1410bp) protein (470aa)
Type III effector Hrp-dependent outer n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BXJ6_DELAS rbh
Type III effector Hrp-dependent outer {ECO:0000313|EMBL:ABX38272.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia aci
Hrp-dependent type III effector protein
13_1_20cm_4_scaffold_13_20
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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17932..18951
DNA (1020bp) protein (340aa)
TRAP dicarboxylate transporter, DctP subunit n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BXJ7_DELAS rbh
TRAP dicarboxylate transporter, DctP subunit {ECO:0000313|EMBL:ABX38273.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delf
TRAP dicarboxylate transporter subunit DctP
13_1_20cm_4_scaffold_13_21
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18957..20828
DNA (1872bp) protein (624aa)
TRAP C4-dicarboxylate transport system permease DctM subunit n=2 Tax=cellular organisms RepID=A9BXJ8_DELAS rbh
TRAP C4-dicarboxylate transport system permease DctM subunit {ECO:0000313|EMBL:ABX38274.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia
TRAP C4-dicarboxylate transport system permease DctM rbh
13_1_20cm_4_scaffold_13_22
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20858..21628
DNA (771bp) protein (257aa)
3-oxoacyl-[acyl-carrier-protein] reductase, putative n=2 Tax=cellular organisms RepID=B9TDM0_RICCO rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ABX38275.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia a
short-chain dehydrogenase/reductase SDR
13_1_20cm_4_scaffold_13_23
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22037..23455
DNA (1419bp) protein (473aa)
RNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadace
RNA-splicing ligase RtcB n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BXK0_DELAS rbh
hypothetical protein
13_1_20cm_4_scaffold_13_24
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23471..25432)
DNA (1962bp) protein (654aa)
GAF modulated sigma54 specific transcriptional regulator, Fis family n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BXK1_DELAS rbh
GAF modulated sigma54 specific transcriptional regulator, Fis family {ECO:0000313|EMBL:ABX38277.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae;
Fis family GAF modulated sigma54 specific transcriptional regulator
13_1_20cm_4_scaffold_13_25
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25755..27278
DNA (1524bp) protein (508aa)
Aldehyde Dehydrogenase n=4 Tax=Delftia RepID=A9BXK2_DELAS rbh
Aldehyde dehydrogenase {ECO:0000313|EMBL:EPD46065.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 1
aldehyde dehydrogenase rbh
13_1_20cm_4_scaffold_13_26
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27346..27720
DNA (375bp) protein (125aa)
Uncharacterized protein n=2 Tax=Delftia RepID=A9BXK3_DELAS
Uncharacterized protein {ECO:0000313|EMBL:ABX38279.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (stra
hypothetical protein
13_1_20cm_4_scaffold_13_27
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27739..28326)
DNA (588bp) protein (196aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BXK4_DELAS rbh
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen {ECO:0000313|EMBL:ABX38280.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadace
alkyl hydroperoxide reductase
13_1_20cm_4_scaffold_13_28
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28403..31471)
DNA (3069bp) protein (1023aa)
Acriflavin resistance protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BXK5_DELAS rbh
Acriflavin resistance protein {ECO:0000313|EMBL:ABX38281.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans
acriflavin resistance protein
13_1_20cm_4_scaffold_13_29
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31464..32651)
DNA (1188bp) protein (396aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BXK6_DELAS rbh
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ABX38282.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delft
RND family efflux transporter MFP subunit
13_1_20cm_4_scaffold_13_30
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32728..33345)
DNA (618bp) protein (206aa)
Transcriptional regulator, TetR family n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BXK7_DELAS rbh
Bacterial regulatory s, tetR family protein {ECO:0000313|EMBL:KFJ14020.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delfti
TetR family transcriptional regulator
Displaying items 1-30 of 99 in total

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