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13_1_20cm_4_scaffold_15

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Displaying items 1-30 of 84 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_15_1
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..129)
DNA (129bp) protein (43aa)
Electron transfer flavoprotein beta-subunit EtfS n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HSY3_RUBGI
Electron transfer flavoprotein subunit beta {ECO:0000313|EMBL:EZP50854.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delf
etfS; electron transfer flavoprotein beta-subunit EtfS
13_1_20cm_4_scaffold_15_2
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(339..1628)
DNA (1290bp) protein (430aa)
MscS Mechanosensitive ion channel n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BVG0_DELAS rbh
MscS Mechanosensitive ion channel {ECO:0000313|EMBL:ABX35027.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovo
mechanosensitive ion channel protein MscS
13_1_20cm_4_scaffold_15_3
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1721..2530)
DNA (810bp) protein (270aa)
Enoyl-CoA hydratase/isomerase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BVF9_DELAS rbh
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:ABX35026.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans
enoyl-CoA hydratase/isomerase
13_1_20cm_4_scaffold_15_4
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2548..3501)
DNA (954bp) protein (318aa)
Histone deacetylase superfamily n=2 Tax=Delftia RepID=A9BVF8_DELAS rbh
Histone deacetylase superfamily {ECO:0000313|EMBL:ABX35025.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovora
histone deacetylase superfamily protein
13_1_20cm_4_scaffold_15_5
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3544..4464
DNA (921bp) protein (307aa)
ATPase associated with various cellular activities AAA_3 n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BVF7_DELAS rbh
ATPase associated with various cellular activities AAA_3 {ECO:0000313|EMBL:ABX35024.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;"
ATPase
13_1_20cm_4_scaffold_15_6
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4464..5498
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BVF6_DELAS rbh
Uncharacterized protein {ECO:0000313|EMBL:ABX35023.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (stra
hypothetical protein
13_1_20cm_4_scaffold_15_7
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5495..7675
DNA (2181bp) protein (727aa)
Transglutaminase domain protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BVF5_DELAS rbh
Transglutaminase domain protein {ECO:0000313|EMBL:ABX35022.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovora
transglutaminase domain-containing protein rbh
13_1_20cm_4_scaffold_15_8
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7672..8850
DNA (1179bp) protein (393aa)
Lytic murein transglycosylase B n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BVF4_DELAS rbh
Lytic murein transglycosylase B {ECO:0000313|EMBL:ABX35021.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovora
lytic murein transglycosylase B
13_1_20cm_4_scaffold_15_9
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8878..10188)
DNA (1311bp) protein (437aa)
Putative transporter signal peptide protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BVF3_DELAS rbh
Putative transporter signal peptide protein {ECO:0000313|EMBL:ABX35020.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delft
putative transporter signal peptide protein rbh
13_1_20cm_4_scaffold_15_10
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10287..10667
DNA (381bp) protein (127aa)
Heat shock protein HSP20 n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BVF2_DELAS
Heat shock protein HSP20 {ECO:0000313|EMBL:ABX35019.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (str
heat shock protein HSP20
13_1_20cm_4_scaffold_15_11
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(10848..11888)
DNA (1041bp) protein (347aa)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00195365}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-th
glycoprotease family metalloendopeptidase (EC:3.4.24.57)
tRNA N6-adenosine threonylcarbamoyltransferase n=2 Tax=Delftia RepID=A9BVF1_DELAS rbh
13_1_20cm_4_scaffold_15_12
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11979..13700)
DNA (1722bp) protein (574aa)
Diguanylate cyclase/phosphodiesterase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BVF0_DELAS rbh
Diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:ABX35017.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia aci
diguanylate cyclase/phosphodiesterase
13_1_20cm_4_scaffold_15_13
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14033..15298
DNA (1266bp) protein (422aa)
Response regulator receiver and ANTAR domain protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BVE9_DELAS rbh
Response regulator receiver and ANTAR domain protein {ECO:0000313|EMBL:ABX35016.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" sour
response regulator receiver/ANTAR domain-containing protein
13_1_20cm_4_scaffold_15_14
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15608..16888
DNA (1281bp) protein (427aa)
Twin-arginine translocation pathway signal n=2 Tax=Delftia RepID=A9BVE8_DELAS rbh
Twin-arginine translocation pathway signal protein {ECO:0000313|EMBL:AEF91259.1}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source
twin-arginine translocation pathway signal protein rbh
13_1_20cm_4_scaffold_15_15
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16929..17870
DNA (942bp) protein (314aa)
Nitrate ABC transporter, inner membrane subunit n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BVE7_DELAS rbh
Nitrate ABC transporter, inner membrane subunit {ECO:0000313|EMBL:ABX35014.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="D
nitrate ABC transporter inner membrane subunit rbh
13_1_20cm_4_scaffold_15_16
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17867..18673
DNA (807bp) protein (269aa)
Nitrate ABC transporter, ATPase subunits C and D n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BVE6_DELAS rbh
Nitrate ABC transporter, ATPase subunits C and D {ECO:0000313|EMBL:ABX35013.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="
nitrate ABC transporter ATPases C and D
13_1_20cm_4_scaffold_15_17
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18734..19174)
DNA (441bp) protein (147aa)
Putative signal-transduction protein with CBS domains n=2 Tax=Delftia RepID=A9BVE5_DELAS
Putative signal transduction protein with CBS domains {ECO:0000313|EMBL:AEF91262.1}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" sou
putative signal transduction protein with CBS domains
13_1_20cm_4_scaffold_15_18
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19297..19950)
DNA (654bp) protein (218aa)
Uncharacterized protein n=2 Tax=Delftia RepID=A9BVE4_DELAS rbh
Putative uncharacterized protein {ECO:0000313|EMBL:AEF91263.1}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (str
hypothetical protein
13_1_20cm_4_scaffold_15_19
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20081..21820)
DNA (1740bp) protein (580aa)
Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BVE3_DELAS rbh
Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor {ECO:0000313|EMBL:ABX35010.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; D
Pas/Pac sensor-containing methyl-accepting chemotaxis sensory transducer
13_1_20cm_4_scaffold_15_20
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22236..23516
DNA (1281bp) protein (427aa)
FAD-dependent pyridine nucleotide-disulphide oxidoreductase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BTP1_DELAS rbh
FAD-dependent pyridine nucleotide-disulphide oxidoreductase {ECO:0000313|EMBL:ABX35009.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.
FAD-dependent pyridine nucleotide-disulfide oxidoreductase rbh
13_1_20cm_4_scaffold_15_21
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23567..26431
DNA (2865bp) protein (955aa)
Molybdopterin oxidoreductase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BTP0_DELAS rbh
Molybdopterin oxidoreductase {ECO:0000313|EMBL:ABX35008.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans
molybdopterin oxidoreductase
13_1_20cm_4_scaffold_15_22
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26517..27431
DNA (915bp) protein (305aa)
Glycosyl transferase family 3 n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BTN9_DELAS rbh
Glycosyl transferase family 3 {ECO:0000313|EMBL:ABX35007.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans
glycosyl transferase family protein
13_1_20cm_4_scaffold_15_23
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27459..28271
DNA (813bp) protein (271aa)
Uroporphyrin-III C-methyltransferase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BTN8_DELAS rbh
Uroporphyrin-III C-methyltransferase {ECO:0000313|EMBL:ABX35006.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acid
uroporphyrin-III C-methyltransferase
13_1_20cm_4_scaffold_15_24
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28523..29344
DNA (822bp) protein (274aa)
Extracellular solute-binding protein family 3 n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BTN7_DELAS rbh
Extracellular solute-binding protein family 3 {ECO:0000313|EMBL:ABX35005.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Del
extracellular solute-binding protein
13_1_20cm_4_scaffold_15_25
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29369..31462
DNA (2094bp) protein (698aa)
Histidine kinase {ECO:0000313|EMBL:ABX35004.1}; EC=2.7.13.3 {ECO:0000313|EMBL:ABX35004.1};; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia
histidine kinase (EC:2.7.13.3)
Histidine kinase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BTN6_DELAS rbh
13_1_20cm_4_scaffold_15_26
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31449..31955)
DNA (507bp) protein (169aa)
Thioesterase superfamily protein n=2 Tax=Delftia RepID=A9BTN5_DELAS rbh
Thioesterase superfamily protein {ECO:0000313|EMBL:ABX35003.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovor
thioesterase superfamily protein
13_1_20cm_4_scaffold_15_27
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32022..33242
DNA (1221bp) protein (407aa)
HI0933 family protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BTN4_DELAS rbh
HI0933 family protein {ECO:0000313|EMBL:ABX35002.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain
hypothetical protein
13_1_20cm_4_scaffold_15_28
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33408..33620
DNA (213bp) protein (71aa)
30S ribosomal protein S21 n=2 Tax=Delftia RepID=RS21_DELAS
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delfti
rpsU; 30S ribosomal protein S21
13_1_20cm_4_scaffold_15_29
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33743..34189
DNA (447bp) protein (149aa)
GatB/YqeY domain protein n=2 Tax=Delftia RepID=A9BTN2_DELAS
GatB/YqeY domain-containing protein {ECO:0000313|EMBL:AEF91273.1}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (
GatB/YqeY domain-containing protein
13_1_20cm_4_scaffold_15_30
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34215..35195)
DNA (981bp) protein (327aa)
Transcriptional regulator, LysR family n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BTN1_DELAS rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EZP55035.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia s
LysR family transcriptional regulator rbh
Displaying items 1-30 of 84 in total

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