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13_1_20cm_4_scaffold_25

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Displaying items 1-30 of 60 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_25_trna_1
unknown

Not on your lists

comp(248..337)
DNA (90bp)
transferRNA
13_1_20cm_4_scaffold_25_1
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(391..1656)
DNA (1266bp) protein (422aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.
Aspartokinase n=2 Tax=Delftia RepID=A9BZ49_DELAS rbh
aspartate kinase
13_1_20cm_4_scaffold_25_2
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1835..2794)
DNA (960bp) protein (320aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161, ECO:0000256|SAAS:SAAS00043109}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161, ECO:0000256|SAAS:SAAS00054821};; tRNA(Ile)-2-lysyl-cytidine
tRNA(Ile)-lysidine synthase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BZ48_DELAS rbh
tRNA(Ile)-lysidine synthetase
13_1_20cm_4_scaffold_25_3
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2981..3958)
DNA (978bp) protein (326aa)
acetyl-CoA carboxylase, carboxyl transferase subunit alpha (EC:2.7.7.72)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha n=2 Tax=Delftia RepID=A9BZ47_DELAS rbh
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00176990}; Short=ACCase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; Short=
13_1_20cm_4_scaffold_25_4
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4042..4851)
DNA (810bp) protein (270aa)
HhH-GPD family protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BZ46_DELAS rbh
HhH-GPD family protein {ECO:0000313|EMBL:ABX35146.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strai
HhH-GPD family protein
13_1_20cm_4_scaffold_25_5
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4901..6286)
DNA (1386bp) protein (462aa)
Cysteine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00041}; EC=6.1.1.16 {ECO:0000255|HAMAP-Rule:MF_00041};; Cysteinyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00041}; Short=CysRS {ECO:0000255|HAMAP-Rul
cysS; cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=SYC_DELAS rbh
13_1_20cm_4_scaffold_25_6
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6491..7024
DNA (534bp) protein (178aa)
TPR repeat-containing protein n=2 Tax=Delftia RepID=A9BZ44_DELAS rbh
TPR repeat-containing protein {ECO:0000313|EMBL:EZP51313.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313
hypothetical protein
13_1_20cm_4_scaffold_25_7
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7168..7755
DNA (588bp) protein (196aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; Flags: Precursor;; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria;
peptidyl-prolyl isomerase (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase n=2 Tax=Delftia RepID=A9BZ43_DELAS rbh
13_1_20cm_4_scaffold_25_8
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7813..8319
DNA (507bp) protein (169aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; C
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BZ42_DELAS rbh
cyclophilin type peptidyl-prolyl cis-trans isomerase rbh
13_1_20cm_4_scaffold_25_9
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8484..9332
DNA (849bp) protein (283aa)
UDP-2,3-diacylglucosamine hydrolase {ECO:0000256|HAMAP-Rule:MF_00575, ECO:0000256|SAAS:SAAS00063966}; EC=3.6.1.54 {ECO:0000256|HAMAP-Rule:MF_00575, ECO:0000256|SAAS:SAAS00063978};; UDP-2,3-diacylgluco
UDP-2,3-diacylglucosamine hydrolase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BZ41_DELAS rbh
UDP-2,3-diacylglucosamine hydrolase
13_1_20cm_4_scaffold_25_10
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9329..10198
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BZ40_DELAS rbh
Uncharacterized protein {ECO:0000313|EMBL:ABX35140.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (stra
hypothetical protein
13_1_20cm_4_scaffold_25_11
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10189..11157)
DNA (969bp) protein (323aa)
Transcriptional regulator, LysR family n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BZ39_DELAS rbh
Bacterial regulatory helix-turn-helix , lysR family protein {ECO:0000313|EMBL:KFJ09071.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;
LysR family transcriptional regulator
13_1_20cm_4_scaffold_25_12
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11224..12039
DNA (816bp) protein (272aa)
permease n=1 Tax=Chryseobacterium taeanense RepID=UPI000379F52C rbh
Putative uncharacterized protein {ECO:0000313|EMBL:AEF91141.1}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (str
hypothetical protein
13_1_20cm_4_scaffold_25_13
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12282..14462)
DNA (2181bp) protein (727aa)
Gluconate 2-dehydrogenase (Acceptor) {ECO:0000313|EMBL:ABX35137.1}; EC=1.1.99.3 {ECO:0000313|EMBL:ABX35137.1};; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Com
gluconate 2-dehydrogenase (EC:1.1.99.3) rbh
Gluconate 2-dehydrogenase (Acceptor) n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BZ37_DELAS rbh
13_1_20cm_4_scaffold_25_14
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14798..17428)
DNA (2631bp) protein (877aa)
Pyruvate dehydrogenase E1 component {ECO:0000256|PIRNR:PIRNR000156}; EC=1.2.4.1 {ECO:0000256|PIRNR:PIRNR000156};; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; C
Pyruvate dehydrogenase E1 component n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BZ36_DELAS rbh
2-oxoacid dehydrogenase subunit E1
13_1_20cm_4_scaffold_25_15
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17533..18003
DNA (471bp) protein (157aa)
Transcriptional regulator, AsnC family n=4 Tax=Delftia RepID=A9BZ35_DELAS
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:ABX35135.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia ac
AsnC family ranscriptional regulator
13_1_20cm_4_scaffold_25_16
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18017..18937)
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BZ34_DELAS rbh
Uncharacterized protein {ECO:0000313|EMBL:ABX35134.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (stra
hypothetical protein
13_1_20cm_4_scaffold_25_17
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19129..19794)
DNA (666bp) protein (222aa)
Phospholipase/Carboxylesterase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BZ33_DELAS rbh
Phospholipase/Carboxylesterase {ECO:0000313|EMBL:ABX35133.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovoran
phospholipase/carboxylesterase
13_1_20cm_4_scaffold_25_18
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19890..20828)
DNA (939bp) protein (313aa)
Extradiol ring-cleavage dioxygenase class III protein subunit B n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BZ32_DELAS rbh
Extradiol ring-cleavage dioxygenase class III protein subunit B {ECO:0000313|EMBL:ABX35132.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delf
extradiol ring-cleavage dioxygenase class III protein subunit B
13_1_20cm_4_scaffold_25_19
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20911..21309)
DNA (399bp) protein (133aa)
Class I peptide chain release factor n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BZ31_DELAS
Class I peptide chain release factor {ECO:0000313|EMBL:ABX35131.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acid
class I peptide chain release factor
13_1_20cm_4_scaffold_25_20
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21314..22198)
DNA (885bp) protein (295aa)
Alpha/beta hydrolase fold n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BZ30_DELAS rbh
Alpha/beta hydrolase fold {ECO:0000313|EMBL:ABX35130.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (st
alpha/beta hydrolase fold protein
13_1_20cm_4_scaffold_25_21
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22195..22638)
DNA (444bp) protein (148aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169,
3-dehydroquinate dehydratase (EC:4.2.1.10)
3-dehydroquinate dehydratase n=2 Tax=Delftia RepID=A9BZ29_DELAS
13_1_20cm_4_scaffold_25_22
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22769..23134)
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BZ28_DELAS
Uncharacterized protein {ECO:0000313|EMBL:ABX35128.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (stra
hypothetical protein
13_1_20cm_4_scaffold_25_23
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23287..25173
DNA (1887bp) protein (629aa)
Glutamine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00016670}; EC=6.1.1.18 {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00023088};; Glutaminyl-tRNA synthetase {ECO:
glutaminyl-tRNA synthetase (EC:6.1.1.18)
Glutamine--tRNA ligase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BZ27_DELAS rbh
13_1_20cm_4_scaffold_25_24
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25303..26019
DNA (717bp) protein (239aa)
Methyltransferase type 12 n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BZ26_DELAS rbh
Methyltransferase type 12 {ECO:0000313|EMBL:ABX35126.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (st
type 12 methyltransferase
13_1_20cm_4_scaffold_25_25
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26111..26428
DNA (318bp) protein (106aa)
Uncharacterized protein n=2 Tax=Delftia RepID=A9BZ25_DELAS
Uncharacterized protein {ECO:0000313|EMBL:KFJ10067.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseud
hypothetical protein
13_1_20cm_4_scaffold_25_26
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26590..28857
DNA (2268bp) protein (756aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BZ24_DELAS rbh
Uncharacterized protein {ECO:0000313|EMBL:ABX35124.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (stra
hypothetical protein rbh
13_1_20cm_4_scaffold_25_27
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29037..29834
DNA (798bp) protein (266aa)
Peptidase M23B n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BZ23_DELAS rbh
Peptidase M23B {ECO:0000313|EMBL:ABX35123.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14
peptidase M23B
13_1_20cm_4_scaffold_25_28
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29857..30435)
DNA (579bp) protein (193aa)
Putative lipoprotein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BZ22_DELAS rbh
Putative lipoprotein {ECO:0000313|EMBL:ABX35122.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain
putative lipoprotein
13_1_20cm_4_scaffold_25_29
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30768..31610
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BZ21_DELAS rbh
Uncharacterized protein {ECO:0000313|EMBL:ABX35121.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (stra
hypothetical protein
Displaying items 1-30 of 60 in total

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