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13_1_20cm_4_scaffold_6664

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_6664_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(51..1640)
DNA (1590bp) protein (530aa)
DNA polymerase III, subunit gamma/tau Tax=GWA2_Rokubacteria_73_35_curated
DNA polymerase III, subunit gamma/tau id=3995093 bin=GWA2_Methylomirabilis_73_35 species=Chlamydomonas reinhardtii genus=Chlamydomonas taxon_order=Chlamydomonadales taxon_class=Chlorophyceae phylum=Chlorophyta tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
13_1_20cm_4_scaffold_6664_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

1811..2395
DNA (585bp) protein (195aa)
Lytic transglycosylase, catalytic Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Lytic transglycosylase, catalytic id=3544309 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
lytic transglycosylase, catalytic
13_1_20cm_4_scaffold_6664_3
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(2397..3626)
DNA (1230bp) protein (410aa)
biotin carboxylase-like Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
biotin carboxylase-like id=14626151 bin=bin7_NC10_sister species=Anaeromyxobacter dehalogenans genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10 rbh
biotin carboxylase-like
13_1_20cm_4_scaffold_6664_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(3670..3951)
DNA (282bp) protein (94aa)
nitrogen-fixing NifU domain-containing protein; K07400 Fe/S biogenesis protein NfuA Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Nitrogen fixation protein NifU id=4012736 bin=GWF2_Methylomirabilis_70_14 species=uncultured Acidobacteria bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
nitrogen-fixing NifU domain-containing protein
13_1_20cm_4_scaffold_6664_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(4023..4952)
DNA (930bp) protein (310aa)
Radical SAM domain-containing protein Tax=GWA2_Rokubacteria_73_35_curated
Radical SAM domain protein id=4539028 bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
radical SAM domain protein
13_1_20cm_4_scaffold_6664_6
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

5360..5566
DNA (207bp) protein (69aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Zinc finger, CDGSH-type id=14625183 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=bin7_NC10_sister organism_group=NC10
iron-binding zinc finger protein, CDGSH type
13_1_20cm_4_scaffold_6664_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(5582..5869)
DNA (288bp) protein (96aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=4539026 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_20cm_4_scaffold_6664_8
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

5910..6869
DNA (960bp) protein (320aa)
gsiC; glutathione transport system permease GsiC; K02033 peptide/nickel transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Dipeptide transport system permease protein DppB id=4539024 bin=GWA2_Methylomirabilis_73_35 species=Oligotropha carboxidovorans genus=Oligotropha taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
gsiC; glutathione transport system permease GsiC
13_1_20cm_4_scaffold_6664_9
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

6866..7534
DNA (669bp) protein (223aa)
binding-protein-dependent transport system inner membrane protein; K02034 peptide/nickel transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Putative peptide ABC transporter permease protein id=4539023 bin=GWA2_Methylomirabilis_73_35 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Displaying 9 items

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