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13_1_20CM_4_Euryarchaeota_52_7

13_1_20CM_4_Archaea_52_8
In projects: 13_1_20CM_4  |  archaea_ggkbase  |  meta-analysis_of_species_overlap_in_grassland_soils_environments

Consensus taxonomy: Archaea

Taxonomy override: Euryarchaeota

Metagenomic Context

Parent: 13_1_20cm_4_UNK

Properties

Avg. coverage: 7.57 Longest contig: 18.87 Kbp Bin length: 1.57 Mbp GC content: 52.36 %
Contigs count: 883 Features count: 1897 rRNAs count: 0 tRNAs count: 5

Genome completeness

partial RP 20 / 55 MC: 13 BSCG 7 / 51 MC: 3 ASCG 21 / 38 MC: 16

Description

Low GC Euryarchaeota-CB

Displaying items 651-700 of 883 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
13_1_20cm_4_scaffold_98360
Species: RBG_16_Archaea_50_20_curated (100%)
2 1635 bp 51.25 5.22 98.35
13_1_20cm_4_scaffold_165752
Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (100%)
2 2095 bp 53.79 9.94 98.38
13_1_20cm_4_scaffold_136584
Species: RBG_16_Archaea_50_20_curated (100%)
1 1418 bp 52.68 3.72 98.38
13_1_20cm_4_scaffold_180545
Species: RBG_16_Archaea_50_20_curated (50%)
2 1253 bp 52.04 4.21 98.40
13_1_20cm_4_scaffold_27083 3 2829 bp 52.14 5.32 98.41
13_1_20cm_4_scaffold_125101
Species: RBG_16_Archaea_50_20_curated (50%)
2 2454 bp 53.30 5.22 98.41
13_1_20cm_4_scaffold_51770
Species: Archaeoglobus sulfaticallidus (50%)
2 2152 bp 56.13 17.85 98.42
13_1_20cm_4_scaffold_240057
Species: RBG_13_Bathyarchaeota_38_9_curated (50%)
2 1076 bp 52.23 3.27 98.42
13_1_20cm_4_scaffold_255847
Species: RBG_19FT_COMBO_Chloroflexi_50_10_curated (50%)
2 1032 bp 52.71 13.86 98.55
13_1_20cm_4_scaffold_231206
Species: Cellulomonas bogoriensis (50%)
2 1102 bp 48.00 3.42 98.55
13_1_20cm_4_scaffold_54997
Species: RBG_16_Thaumarchaeota_49_8_curated (66.67%)
3 2097 bp 52.65 4.91 98.57
13_1_20cm_4_scaffold_75681
Species: RBG_16_Thaumarchaeota_49_8_curated (50%)
2 1829 bp 56.53 3.98 98.58
13_1_20cm_4_scaffold_87134
Species: RBG_13_Bathyarchaeota_38_9_curated (50%)
2 1722 bp 52.73 19.39 98.61
13_1_20cm_4_scaffold_236493
Species: RLO_Deltaproteobacteria_60_19 (50%)
2 1086 bp 55.52 3.93 98.62
13_1_20cm_4_scaffold_75422
Species: RBG_16_Archaea_50_20_curated (50%)
2 1831 bp 50.19 19.19 98.63
13_1_20cm_4_scaffold_174238
Species: RBG_16_NC10_65_8_curated (50%)
2 1273 bp 53.42 3.35 98.74
13_1_20cm_4_scaffold_141956
Species: RBG_16_Euryarchaeota_41_19_curated (50%)
2 1394 bp 50.65 16.93 98.78
13_1_20cm_4_scaffold_11748
Species: RBG_13_Bathyarchaeota_38_9_curated (50%)
4 3963 bp 53.62 8.93 98.79
13_1_20cm_4_scaffold_28668
Species: Aciduliprofundum boonei (50%)
2 2762 bp 45.76 4.45 98.95
13_1_20cm_4_scaffold_176061
Species: Candidatus Nitrososphaera evergladensis (50%)
2 1267 bp 44.75 3.37 98.97
13_1_20cm_4_scaffold_232851
Species: Methanoculleus sp. MH98A (50%)
2 1097 bp 53.33 13.04 99.00
13_1_20cm_4_scaffold_179075
Species: RBG_16_Archaea_50_20_curated (100%)
2 1257 bp 52.03 3.79 99.05
13_1_20cm_4_scaffold_11367
Phylum: Bathyarchaeota (50%)
6 4013 bp 52.31 6.50 99.05
13_1_20cm_4_scaffold_42762
Species: Methanopyrus kandleri (100%)
1 2335 bp 52.89 7.85 99.06
13_1_20cm_4_scaffold_215921
Species: RBG_16_Bathyarchaeota_48_13_curated (50%)
2 1147 bp 53.27 3.28 99.13
13_1_20cm_4_scaffold_159048
Species: RBG_16_Thaumarchaeota_49_8_curated (50%)
2 1325 bp 51.25 11.37 99.17
13_1_20cm_4_scaffold_181675
Species: BJP_S1_SUB10_Methanoculleus_61_9 (50%)
2 1249 bp 48.44 4.22 99.20
13_1_20cm_4_scaffold_70224
Species: uncultured archaeon (50%)
2 1890 bp 49.95 3.72 99.21
13_1_20cm_4_scaffold_92247
Species: RBG_13_Bathyarchaeota_46_16b_curated (50%)
2 1681 bp 53.24 4.33 99.23
13_1_20cm_4_scaffold_132781
Species: RBG_13_Lokiarchaeota_45_8_curated (50%)
2 1436 bp 53.13 2.45 99.23
13_1_20cm_4_scaffold_102268
Species: Methanosarcina horonobensis (50%)
2 1608 bp 51.31 2.03 99.25
13_1_20cm_4_scaffold_84240
Species: RIFOXYA2_FULL_Elusimicrobia_53_38_curated (50%)
2 1747 bp 51.92 6.75 99.26
13_1_20cm_4_scaffold_118813
Species: Haloferax elongans (100%)
2 1508 bp 48.34 3.33 99.27
13_1_20cm_4_scaffold_223499
Species: archaeon Loki (50%)
2 1124 bp 49.38 5.36 99.29
13_1_20cm_4_scaffold_132504
Class: Halobacteria (66.67%)
3 2334 bp 51.29 13.12 99.36
13_1_20cm_4_scaffold_228075
Species: RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated (50%)
2 1111 bp 53.83 3.61 99.37
13_1_20cm_4_scaffold_122015
Species: uncultured marine thaumarchaeote KM3_55_F05 (50%)
2 1491 bp 56.67 3.54 99.40
13_1_20cm_4_scaffold_158396
Species: Methanocaldococcus infernus (50%)
2 1328 bp 52.64 14.74 99.40
13_1_20cm_4_scaffold_93467
Species: RBG_16_Euryarchaeota_68_12_curated (50%)
2 1672 bp 51.56 3.60 99.40
13_1_20cm_4_scaffold_92191
Species: RBG_16_Chloroflexi_60_22_curated (50%)
2 1681 bp 56.04 7.62 99.41
13_1_20cm_4_scaffold_168841
Species: RBG_16_Bathyarchaeota_48_13_curated (50%)
2 1291 bp 56.31 15.75 99.46
13_1_20cm_4_scaffold_147205
Species: Thermoplasmatales archaeon I-plasma (50%)
2 1372 bp 51.75 21.22 99.49
13_1_20cm_4_scaffold_247476
Species: Methanococcus maripaludis (100%)
1 1055 bp 52.61 7.85 99.53
13_1_20cm_4_scaffold_229723
Species: RBG_13_Bathyarchaeota_46_16b_curated (50%)
2 1106 bp 55.52 5.45 99.55
13_1_20cm_4_scaffold_273749
Species: Methanosarcina acetivorans (50%)
2 2700 bp 56.67 4.09 99.56
13_1_20cm_4_scaffold_151068
Species: RBG_16_Archaea_50_20_curated (50%)
2 1356 bp 53.83 9.44 99.56
13_1_20cm_4_scaffold_95302
Species: Ferroglobus placidus (50%)
2 1657 bp 56.19 2.88 99.58
13_1_20cm_4_scaffold_197110
Species: RBG_13_Bathyarchaeota_38_9_curated (100%)
1 1202 bp 47.42 4.39 99.58
13_1_20cm_4_scaffold_85236
Species: RBG_16_Archaea_50_20_curated (50%)
2 1738 bp 53.97 14.30 99.60
13_1_20cm_4_scaffold_84962
Species: Archaeoglobus sulfaticallidus (50%)
2 1741 bp 49.63 5.05 99.60
Displaying items 651-700 of 883 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.