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13_1_20CM_4_Bacteriodetes_60_6

13_1_20CM_4_Bacteria_61_7
In projects: 13_1_20CM_4  |  angelo_ncbi_2016  |  meta-analysis_of_species_overlap_in_grassland_soils_environments

Consensus taxonomy: Bacteria

Metagenomic Context

Parent: 13_1_20cm_4_UNK

Properties

Avg. coverage: 6.87 Longest contig: 25.24 Kbp Bin length: 5.94 Mbp GC content: 60.62 %
Contigs count: 3728 Features count: 6853 rRNAs count: 0 tRNAs count: 10

Genome completeness

partial RP 12 / 55 MC: 1 BSCG 11 / 51 MC: 2 ASCG 5 / 38 MC: 1

Description

<1 partial genome-CB

Displaying items 201-250 of 3728 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
13_1_20cm_4_scaffold_91931
Species: Gemmatimonadetes bacterium KBS708 (100%)
2 1683 bp 67.56 12.83 100.18
13_1_20cm_4_scaffold_223772
Species: Rhodothermus marinus (100%)
2 1123 bp 63.67 6.26 100.18
13_1_20cm_4_scaffold_223785
Species: Gemmatimonadetes bacterium KBS708 (50%)
2 1123 bp 73.11 17.21 100.18
13_1_20cm_4_scaffold_91228
Species: Fibrella aestuarina (50%)
2 1689 bp 70.04 5.65 100.18
13_1_20cm_4_scaffold_218760
Species: Thermoanaerobaculum aquaticum (50%)
2 1138 bp 73.20 5.29 100.18
13_1_20cm_4_scaffold_216740
Species: marine sediment metagenome (50%)
2 1144 bp 63.11 3.73 100.18
13_1_20cm_4_scaffold_214746
Species: Nafulsella turpanensis (50%)
2 1150 bp 69.83 4.58 100.17
13_1_20cm_4_scaffold_213729
Species: R_Acidobacteria_67_28 (50%)
2 1153 bp 53.77 3.92 100.17
13_1_20cm_4_scaffold_210932
Species: mine drainage metagenome (50%)
2 1162 bp 69.10 6.48 100.17
13_1_20cm_4_scaffold_84381
Species: R_Acidobacteria_67_21 (50%)
2 1746 bp 73.08 11.50 100.17
13_1_20cm_4_scaffold_82101
Species: GWF2_Bacteroidetes_40_14_curated (50%)
2 1767 bp 67.46 7.10 100.17
13_1_20cm_4_scaffold_204466
Species: uncultured bacterium (100%)
2 1180 bp 58.14 8.08 100.17
13_1_20cm_4_scaffold_41565
Domain: Bacteria (100%)
3 2363 bp 54.13 8.29 100.17
13_1_20cm_4_scaffold_196376
Species: RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated (50%)
2 1204 bp 69.77 5.00 100.17
13_1_20cm_4_scaffold_193584
Species: Gemmatimonadetes bacterium KBS708 (100%)
2 1213 bp 63.31 3.10 100.16
13_1_20cm_4_scaffold_187473
Species: Haliscomenobacter hydrossis (50%)
2 1231 bp 65.96 3.67 100.16
13_1_20cm_4_scaffold_187545
Species: Chryseobacterium gleum (50%)
2 1231 bp 66.69 6.52 100.16
13_1_20cm_4_scaffold_181776
Species: Rhodothermus marinus (50%)
2 1249 bp 68.61 13.87 100.16
13_1_20cm_4_scaffold_179856
Species: R_Gemmatimonadetes_71_11 (50%)
2 1255 bp 70.68 7.80 100.16
13_1_20cm_4_scaffold_175338
Species: Chthonomonas calidirosea (50%)
2 1270 bp 72.28 12.06 100.16
13_1_20cm_4_scaffold_173312
Species: RBG_16_Gemmatimonadetes_66_8_curated (100%)
2 1276 bp 70.69 5.11 100.16
13_1_20cm_4_scaffold_173339
Species: Fibrisoma limi (50%)
2 1276 bp 56.03 7.67 100.16
13_1_20cm_4_scaffold_172566
Species: RLO_RIF_CHLX_71_12 (50%)
2 1279 bp 68.96 6.08 100.16
13_1_20cm_4_scaffold_171716
Species: Spirosoma linguale (50%)
2 1282 bp 54.91 4.31 100.16
13_1_20cm_4_scaffold_67160
Species: Salinibacter ruber (50%)
2 1926 bp 73.10 15.77 100.16
13_1_20cm_4_scaffold_168941
Species: marine sediment metagenome (100%)
2 1291 bp 57.78 9.92 100.16
13_1_20cm_4_scaffold_167903
Species: Rhodothermus marinus (50%)
2 1294 bp 66.62 13.58 100.16
13_1_20cm_4_scaffold_33442
Domain: Bacteria (66.67%)
3 3274 bp 70.49 8.59 100.15
13_1_20cm_4_scaffold_153902
Species: Chthoniobacter flavus (50%)
2 1345 bp 57.17 4.48 100.15
13_1_20cm_4_scaffold_150907
Species: marine gamma proteobacterium HTCC2148 (50%)
2 1357 bp 69.64 2.40 100.15
13_1_20cm_4_scaffold_143641
Species: Gemmatimonadetes bacterium KBS708 (50%)
2 1387 bp 71.45 5.25 100.14
13_1_20cm_4_scaffold_142075
Species: R_Acidobacteria_68_18 (100%)
2 1393 bp 68.41 8.11 100.14
13_1_20cm_4_scaffold_140080
Species: Cyclobacterium qasimii (50%)
2 1402 bp 64.27 9.85 100.14
13_1_20cm_4_scaffold_15632
Phylum: Acidobacteria (66.67%)
3 3538 bp 68.43 11.28 100.14
13_1_20cm_4_scaffold_164261
Species: RBG_16_Gamma2_65_34_curated (50%)
2 2124 bp 57.16 5.20 100.14
13_1_20cm_4_scaffold_136098
Species: Desulfobulbaceae bacterium BRH_c16a (50%)
2 1420 bp 56.34 3.89 100.14
13_1_20cm_4_scaffold_50566
Species: RLO_Gemmatimonadetes_68_9 (50%)
2 2175 bp 67.54 5.54 100.14
13_1_20cm_4_scaffold_127655
Species: R_Gemmatimonadetes_71_11 (50%)
2 1462 bp 73.32 7.55 100.14
13_1_20cm_4_scaffold_125807
Species: Rhodothermus marinus (50%)
2 1471 bp 55.00 3.24 100.14
13_1_20cm_4_scaffold_125200
Species: Gemmatimonadetes bacterium KBS708 (50%)
2 1474 bp 68.39 7.49 100.14
13_1_20cm_4_scaffold_122268
Species: BJP_IG2102_Bacteroidetes_40_12 (50%)
2 1489 bp 64.88 2.36 100.13
13_1_20cm_4_scaffold_121884
Species: Candidatus Solibacter usitatus (50%)
2 1492 bp 56.23 6.22 100.13
13_1_20cm_4_scaffold_120600
Species: Solitalea canadensis (50%)
2 1498 bp 74.37 8.88 100.13
13_1_20cm_4_scaffold_116350
Species: R_Acidobacteria_67_21 (50%)
2 1522 bp 69.05 12.53 100.13
13_1_20cm_4_scaffold_41554
Species: RBG_13_Bacteroidetes_43_22_curated (100%)
2 2364 bp 65.23 4.99 100.13
13_1_20cm_4_scaffold_106878
Species: RBG_13_RIF_OD1_08_37_53_curated (50%)
2 1579 bp 67.51 10.33 100.13
13_1_20cm_4_scaffold_39347
Species: Fibrella aestuarina (50%)
2 2418 bp 69.69 4.67 100.12
13_1_20cm_4_scaffold_98695
Species: RBG_16_Gemmatimonadetes_66_8_curated (50%)
2 1633 bp 69.75 9.99 100.12
13_1_20cm_4_scaffold_88429
Species: Gemmatimonadetes bacterium KBS708 (100%)
2 1711 bp 69.61 3.52 100.12
13_1_20cm_4_scaffold_75126
Species: RHI_Gammaproteobacteria_63_22 (50%)
2 1834 bp 70.77 5.61 100.11
Displaying items 201-250 of 3728 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.