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13_1_20CM_4_Bacteriodetes_60_6

13_1_20CM_4_Bacteria_61_7
In projects: 13_1_20CM_4  |  angelo_ncbi_2016  |  meta-analysis_of_species_overlap_in_grassland_soils_environments

Consensus taxonomy: Bacteria

Metagenomic Context

Parent: 13_1_20cm_4_UNK

Properties

Avg. coverage: 6.87 Longest contig: 25.24 Kbp Bin length: 5.94 Mbp GC content: 60.62 %
Contigs count: 3728 Features count: 6853 rRNAs count: 0 tRNAs count: 10

Genome completeness

partial RP 12 / 55 MC: 1 BSCG 11 / 51 MC: 2 ASCG 5 / 38 MC: 1

Description

<1 partial genome-CB

Displaying items 3451-3500 of 3728 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
13_1_20cm_4_scaffold_178587
Species: Dyadobacter fermentans (50%)
2 1259 bp 52.42 3.39 100.08
13_1_20cm_4_scaffold_180540
Species: uncultured bacterium (100%)
2 1253 bp 55.47 7.61 100.08
13_1_20cm_4_scaffold_184177
Species: GWE2_Bacteroidetes_42_39_curated (50%)
2 1241 bp 70.43 2.83 100.08
13_1_20cm_4_scaffold_185237
Species: Hymenobacter sp. APR13 (50%)
2 1238 bp 68.82 3.65 100.08
13_1_20cm_4_scaffold_37289
Species: RLO_Gemmatimonadetes_68_9 (50%)
2 2473 bp 74.61 10.96 100.08
13_1_20cm_4_scaffold_195963
Species: Fibrisoma limi (50%)
2 1205 bp 61.16 3.75 100.08
13_1_20cm_4_scaffold_197066
Species: RBG_16_Gemmatimonadetes_66_8_curated (100%)
2 1202 bp 68.97 8.35 100.08
13_1_20cm_4_scaffold_197126
Species: Pontibacter korlensis (50%)
2 1202 bp 59.32 5.43 100.08
13_1_20cm_4_scaffold_207431
Species: RIFOXYB12_FULL_Lentisphaerae_65_16_curated (50%)
2 1172 bp 62.29 1.71 100.09
13_1_20cm_4_scaffold_208370
Species: RBG_16_Gemmatimonadetes_66_8_curated (100%)
2 1169 bp 70.32 12.45 100.09
13_1_20cm_4_scaffold_213618
Species: Fibrisoma limi (50%)
2 1154 bp 60.83 2.39 100.09
13_1_20cm_4_scaffold_214633
Species: Rhodothermus marinus (50%)
2 1151 bp 68.98 4.14 100.09
13_1_20cm_4_scaffold_215513
Species: RLO_RIF_CHLX_71_12 (100%)
2 1148 bp 71.86 5.47 100.09
13_1_20cm_4_scaffold_228714
Species: Rhodothermus marinus (50%)
2 1109 bp 67.36 4.75 100.09
13_1_20cm_4_scaffold_228716
Species: Fibrisoma limi (50%)
2 1109 bp 54.73 7.47 100.09
13_1_20cm_4_scaffold_234943
Species: R_Burkholderiales_67_14 (50%)
2 1091 bp 64.44 2.99 100.09
13_1_20cm_4_scaffold_236010
Species: R_Acidobacteria_67_21 (50%)
2 1088 bp 70.04 6.00 100.09
13_1_20cm_4_scaffold_163236
Species: Dyadobacter fermentans (50%)
2 2161 bp 68.39 4.18 100.09
13_1_20cm_4_scaffold_245129
Species: RBG_19FT_COMBO_Aminicenantes_58_17_curated (50%)
2 1061 bp 69.18 7.57 100.09
13_1_20cm_4_scaffold_54957
Species: GWC2_Gemmatimonadetes_71_10_curated (50%)
2 2098 bp 66.78 8.02 100.10
13_1_20cm_4_scaffold_254943
Species: RBG_13_Chloroflexi_52_12_curated (50%)
2 1034 bp 64.99 5.34 100.10
13_1_20cm_4_scaffold_256192
Species: RLO_Gemmatimonadetes_68_9 (50%)
2 1031 bp 70.61 26.78 100.10
13_1_20cm_4_scaffold_259479
Species: Gemmatimonadetes bacterium KBS708 (50%)
2 1022 bp 69.96 9.58 100.10
13_1_20cm_4_scaffold_261787
Species: RBG_16_Gemmatimonadetes_66_8_curated (50%)
2 1016 bp 70.47 4.45 100.10
13_1_20cm_4_scaffold_265454
Species: Gemmatimonadetes bacterium KBS708 (50%)
2 1007 bp 60.48 3.74 100.10
13_1_20cm_4_scaffold_40703
Species: RBG_13_Caldithrix_44_9_curated (50%)
2 3998 bp 64.93 5.21 100.10
13_1_20cm_4_scaffold_121507
Species: Gemmatimonadetes bacterium KBS708 (100%)
2 2907 bp 65.12 8.72 100.10
13_1_20cm_4_scaffold_69344
Species: Flammeovirgaceae bacterium 311 (100%)
2 1900 bp 63.89 4.62 100.11
13_1_20cm_4_scaffold_75126
Species: RHI_Gammaproteobacteria_63_22 (50%)
2 1834 bp 70.77 5.61 100.11
13_1_20cm_4_scaffold_88429
Species: Gemmatimonadetes bacterium KBS708 (100%)
2 1711 bp 69.61 3.52 100.12
13_1_20cm_4_scaffold_98695
Species: RBG_16_Gemmatimonadetes_66_8_curated (50%)
2 1633 bp 69.75 9.99 100.12
13_1_20cm_4_scaffold_39347
Species: Fibrella aestuarina (50%)
2 2418 bp 69.69 4.67 100.12
13_1_20cm_4_scaffold_106878
Species: RBG_13_RIF_OD1_08_37_53_curated (50%)
2 1579 bp 67.51 10.33 100.13
13_1_20cm_4_scaffold_41554
Species: RBG_13_Bacteroidetes_43_22_curated (100%)
2 2364 bp 65.23 4.99 100.13
13_1_20cm_4_scaffold_116350
Species: R_Acidobacteria_67_21 (50%)
2 1522 bp 69.05 12.53 100.13
13_1_20cm_4_scaffold_120600
Species: Solitalea canadensis (50%)
2 1498 bp 74.37 8.88 100.13
13_1_20cm_4_scaffold_121884
Species: Candidatus Solibacter usitatus (50%)
2 1492 bp 56.23 6.22 100.13
13_1_20cm_4_scaffold_122268
Species: BJP_IG2102_Bacteroidetes_40_12 (50%)
2 1489 bp 64.88 2.36 100.13
13_1_20cm_4_scaffold_125200
Species: Gemmatimonadetes bacterium KBS708 (50%)
2 1474 bp 68.39 7.49 100.14
13_1_20cm_4_scaffold_125807
Species: Rhodothermus marinus (50%)
2 1471 bp 55.00 3.24 100.14
13_1_20cm_4_scaffold_127655
Species: R_Gemmatimonadetes_71_11 (50%)
2 1462 bp 73.32 7.55 100.14
13_1_20cm_4_scaffold_50566
Species: RLO_Gemmatimonadetes_68_9 (50%)
2 2175 bp 67.54 5.54 100.14
13_1_20cm_4_scaffold_136098
Species: Desulfobulbaceae bacterium BRH_c16a (50%)
2 1420 bp 56.34 3.89 100.14
13_1_20cm_4_scaffold_164261
Species: RBG_16_Gamma2_65_34_curated (50%)
2 2124 bp 57.16 5.20 100.14
13_1_20cm_4_scaffold_15632
Phylum: Acidobacteria (66.67%)
3 3538 bp 68.43 11.28 100.14
13_1_20cm_4_scaffold_140080
Species: Cyclobacterium qasimii (50%)
2 1402 bp 64.27 9.85 100.14
13_1_20cm_4_scaffold_142075
Species: R_Acidobacteria_68_18 (100%)
2 1393 bp 68.41 8.11 100.14
13_1_20cm_4_scaffold_143641
Species: Gemmatimonadetes bacterium KBS708 (50%)
2 1387 bp 71.45 5.25 100.14
13_1_20cm_4_scaffold_150907
Species: marine gamma proteobacterium HTCC2148 (50%)
2 1357 bp 69.64 2.40 100.15
13_1_20cm_4_scaffold_153902
Species: Chthoniobacter flavus (50%)
2 1345 bp 57.17 4.48 100.15
Displaying items 3451-3500 of 3728 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.