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13_1_20cm_4_scaffold_122

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_122_1
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

1..2136
DNA (2136bp) protein (712aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAG4_GEMAT
hypothetical protein Tax=RBG_16_Actinobacteria_67_10_curated
hypothetical protein
13_1_20cm_4_scaffold_122_2
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

2231..4420
DNA (2190bp) protein (730aa)
putative helicase Tax=RBG_16_Actinobacteria_67_10_curated
SNF2 family helicase id=3868626 bin=GWF2_Methylomirabilis_70_14 species=Roseomonas cervicalis genus=Roseomonas taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
helicase domain-containing protein
13_1_20cm_4_scaffold_122_3
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(4422..6005)
DNA (1584bp) protein (528aa)
Na+/H+ antiporter n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FC95_CONWI
Na+/H+ antiporter {ECO:0000313|EMBL:ADB53390.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (s
Na+/H+ antiporter
13_1_20cm_4_scaffold_122_4
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

6038..6685
DNA (648bp) protein (216aa)
pyrophosphatase PpaX; K06019 pyrophosphatase PpaX [EC:3.6.1.1] Tax=RBG_16_Acidobacteria_68_9_curated
Pyrophosphatase PpaX n=1 Tax=Geobacillus sp. (strain C56-T3) RepID=D7D3V4_GEOSC
HAD-superfamily hydrolase
13_1_20cm_4_scaffold_122_5
RBG_16_Aminicenantes_63_16_curated, Aminicenantes, Bacteria

Not on your lists

6715..7839
DNA (1125bp) protein (375aa)
aminotransferase (EC:2.6.1.-); K00837 [EC:2.6.1.-] Tax=RBG_16_Aminicenantes_63_16_curated
aminotransferase (EC:2.6.1.-); K00837 [EC:2.6.1.-] id=16995602 bin=RBG_16_Aminicenantes_63_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_16_Aminicenantes_63_14 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
aminotransferase (EC:2.6.1.-)
13_1_20cm_4_scaffold_122_6
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

7841..8788
DNA (948bp) protein (316aa)
aminotransferase (EC:2.6.1.-); K00837 [EC:2.6.1.-] Tax=RBG_16_Acidobacteria_68_9_curated
multidrug DMT transporter permease n=1 Tax=Bacillus oceanisediminis RepID=UPI000318F0D3
ectoine utilization protein EutC
13_1_20cm_4_scaffold_122_7
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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8788..9471
DNA (684bp) protein (228aa)
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
13_1_20cm_4_scaffold_122_8
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(9528..10562)
DNA (1035bp) protein (345aa)
phosphate transporter; K03306 inorganic phosphate transporter, PiT family Tax=GWC2_Gemmatimonadetes_71_10_curated
phosphate/sulphate permease; K03306 inorganic phosphate transporter, PiT family id=14627387 bin=bin7_NC10_sister species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=bin7_NC10_sister organism_group=NC10
pit; low-affinity inorganic phosphate transporter
13_1_20cm_4_scaffold_122_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(10562..11176)
DNA (615bp) protein (205aa)
hypothetical protein; K07220 hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative phosphate transport regulator
Uncharacterized protein id=1900756 bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
13_1_20cm_4_scaffold_122_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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11290..12309
DNA (1020bp) protein (340aa)
Amino acid permease-associated region n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01WR3_SOLUE
amino acid transporter Tax=RBG_16_Gemmatimonadetes_66_8_curated
amino acid permease
13_1_20cm_4_scaffold_122_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

12261..12575
DNA (315bp) protein (105aa)
amino acid transporter Tax=RBG_16_Gemmatimonadetes_66_8_curated
Amino acid permease-associated region id=1933685 bin=GWB2_Bacteroidetes_32_14 species=Fibrisoma limi genus=Fibrisoma taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWB2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=a47
amino acid permease
13_1_20cm_4_scaffold_122_12
Thermus filiformis, Thermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(12589..13422)
DNA (834bp) protein (278aa)
Prephenate dehydratase {ECO:0000256|RuleBase:RU361254}; Short=PDT {ECO:0000256|RuleBase:RU361254};; EC=4.2.1.51 {ECO:0000256|RuleBase:RU361254};; TaxID=276 species="Bacteria; Deinococcus-Thermus; Dein
Prephenate dehydratase n=2 Tax=Thermus oshimai RepID=K7R423_THEOS
prephenate dehydratase
13_1_20cm_4_scaffold_122_13
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

13703..14776
DNA (1074bp) protein (358aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAH4_GEMAT
hypothetical protein Tax=RBG_16_Actinobacteria_67_10_curated
Radical SAM domain protein
13_1_20cm_4_scaffold_122_14
unknown

Not on your lists

comp(14790..14987)
DNA (198bp) protein (66aa)

This feature has no annotations

13_1_20cm_4_scaffold_122_15
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(15117..15539)
DNA (423bp) protein (141aa)
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_1_20cm_4_scaffold_122_16

Not on your lists

comp(15700..16644)
DNA (945bp) protein (315aa)
Conserved protein n=1 Tax=uncultured bacterium BAC-L1N9 RepID=Q4JIR8_9BACT
Conserved protein {ECO:0000313|EMBL:AHN97952.1}; TaxID=1447241 species="Bacteria; environmental samples.;" source="uncultured bacterium lac160.;"
hypothetical protein
13_1_20cm_4_scaffold_122_17
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

16738..18015
DNA (1278bp) protein (426aa)
DNA-directed DNA polymerase (EC:2.7.7.7); K14161 protein ImuB Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
DNA-directed DNA polymerase (EC:2.7.7.7)
DNA-directed DNA polymerase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C5S3_SPHTD
13_1_20cm_4_scaffold_122_18
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

18354..21689
DNA (3336bp) protein (1112aa)
DNA polymerase III subunit alpha (EC:2.7.7.7); K14162 error-prone DNA polymerase [EC:2.7.7.7] Tax=RBG_16_Actinobacteria_67_10_curated
DNA polymerase III subunit alpha (EC:2.7.7.7)
DNA polymerase III alpha subunit n=1 Tax=uncultured bacterium W5-102b RepID=H9BWL6_9BACT
13_1_20cm_4_scaffold_122_19
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

21698..22246
DNA (549bp) protein (183aa)
peptide methionine sulfoxide reductase (EC:1.8.4.11); K07304 peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] Tax=CSP1_3_Armatimonadetes
peptide methionine sulfoxide reductase (EC:1.8.4.11); K07304 peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] id=14630607 bin=bin9_gal15 species=Meiothermus ruber genus=Meiothermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=bin9_gal15 organism_group=GAL15
peptide methionine sulfoxide reductase (EC:1.8.4.11)
13_1_20cm_4_scaffold_122_20
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

22256..22993
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U4C0_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:EFH81350.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racem
hypothetical protein
13_1_20cm_4_scaffold_122_21
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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23055..24326
DNA (1272bp) protein (424aa)
allantoinase; K01466 allantoinase [EC:3.5.2.5] Tax=RBG_16_RIF_WS3X_71_46_curated
Allantoinase n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CMI8_MYXFH
allantoinase
13_1_20cm_4_scaffold_122_22
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24314..25321
DNA (1008bp) protein (336aa)
Probable allantoicase {ECO:0000256|HAMAP-Rule:MF_00813}; EC=3.5.3.4 {ECO:0000256|HAMAP-Rule:MF_00813, ECO:0000313|EMBL:CAN96040.1};; Allantoate amidinohydrolase {ECO:0000256|HAMAP-Rule:MF_00813}; TaxI
alc; bifunctional allantoicase/OHCU decarboxylase (EC:3.5.3.4)
Probable allantoicase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GBG2_SORC5
13_1_20cm_4_scaffold_122_23
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25382..25897
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QJ21_9DELT
2-oxo-4-hydroxy-4-carboxy--5-ureidoimidazoline (OHCU) decarboxylase {ECO:0000313|EMBL:AKF09419.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sand
OHCU decarboxylase
13_1_20cm_4_scaffold_122_24
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

25894..26232
DNA (339bp) protein (113aa)
5-hydroxyisourate hydrolase {ECO:0000256|RuleBase:RU361270}; Short=HIU hydrolase {ECO:0000256|RuleBase:RU361270};; Short=HIUHase {ECO:0000256|RuleBase:RU361270};; EC=3.5.2.17 {ECO:0000256|RuleBase:RU3
5-hydroxyisourate hydrolase n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y7X1_9SPHI
hydroxyisourate hydrolase
13_1_20cm_4_scaffold_122_25
Alcanivorax dieselolei, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26244..27446
DNA (1203bp) protein (401aa)
Membrane protein, putative n=1 Tax=Alcanivorax dieselolei (strain DSM 16502 / CGMCC 1.3690 / B-5) RepID=K0CHU6_ALCDB rbh
Membrane protein, putative {ECO:0000313|EMBL:AFT72178.1}; TaxID=930169 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax d
hypothetical protein
13_1_20cm_4_scaffold_122_26
unknown

Not on your lists

27468..28832
DNA (1365bp) protein (455aa)

This feature has no annotations

13_1_20cm_4_scaffold_122_27
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(28839..29669)
DNA (831bp) protein (277aa)
Molybdopterin dehydrogenase FAD-binding protein n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LJT7_HALO1
FAD-binding molybdopterin dehydrogenase protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
FAD-binding molybdopterin dehydrogenase protein
13_1_20cm_4_scaffold_122_28
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29666..30130)
DNA (465bp) protein (155aa)
(2Fe-2S)-binding domain protein n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LJT8_HALO1
(2Fe-2S)-binding domain protein {ECO:0000313|EMBL:ACY18445.1}; TaxID=502025 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Ha
(2Fe-2S)-binding domain-containing protein
13_1_20cm_4_scaffold_122_29

Not on your lists

comp(30130..32313)
DNA (2184bp) protein (728aa)
Putative xanthine dehydrogenase n=1 Tax=uncultured bacterium 66 RepID=E3T662_9BACT
Putative xanthine dehydrogenase {ECO:0000313|EMBL:ADC35806.1}; TaxID=698391 species="Bacteria; environmental samples.;" source="uncultured bacterium 66.;"
aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein
13_1_20cm_4_scaffold_122_30
R_Nitrospirae_66_17, Nitrospirae, Bacteria

Not on your lists

32483..33547
DNA (1065bp) protein (355aa)
methionine synthase; K00549 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] Tax=RIFCSPHIGHO2_01_FULL_Nitrospirae_66_17_curated
methionine synthase; K00549 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] id=14425027 bin=bin1_lowGC species=Methylomonas sp. MK1 genus=Methylomonas taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP rbh
methionine synthase vitamin-B12 independent
Displaying items 1-30 of 57 in total

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