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13_1_20cm_4_scaffold_173

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Displaying items 1-30 of 45 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_173_1
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

3..209
DNA (207bp) protein (69aa)
30S ribosomal protein S21 n=1 Tax=Thermocrinis albus (strain DSM 14484 / JCM 11386 / HI 11/12) RepID=D3SMK5_THEAH
30S ribosomal protein S21 Tax=RBG_16_Gemmatimonadetes_66_8_curated
30S ribosomal protein S21
13_1_20cm_4_scaffold_173_2
RBG_13_Actinobacteria_63_9_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

226..435
DNA (210bp) protein (70aa)
Cold shock protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAI3_GEMAT
cold shock protein; K03704 cold shock protein (beta-ribbon, CspA family) Tax=RBG_13_Actinobacteria_63_9_curated
Cold-shock protein DNA-binding protein
13_1_20cm_4_scaffold_173_3
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(512..1144)
DNA (633bp) protein (211aa)
XRE family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
Transcriptional regulator, XRE family id=1901860 bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
XRE family transcriptional regulator
13_1_20cm_4_scaffold_173_4
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(1250..1948)
DNA (699bp) protein (233aa)
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
hypothetical protein id=1244488 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
13_1_20cm_4_scaffold_173_5
Blastopirellula marina, Blastopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(1955..2215)
DNA (261bp) protein (87aa)
Putative UV damage endonuclease {ECO:0000313|EMBL:EAQ81339.1}; EC=3.-.-.- {ECO:0000313|EMBL:EAQ81339.1};; TaxID=314230 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycet
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI00030C1AB1
endonuclease
13_1_20cm_4_scaffold_173_6
Thermus oshimai, Thermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(2223..2651)
DNA (429bp) protein (143aa)
Peroxiredoxin, OsmC subfamily n=2 Tax=Thermus oshimai RepID=K7QTV8_THEOS
Peroxiredoxin, OsmC subfamily {ECO:0000313|EMBL:AFV75481.1}; TaxID=751945 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus.;" source="Thermus oshimai JL-2.;"
peroxiredoxin, OsmC subfamily
13_1_20cm_4_scaffold_173_7
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

2767..3243
DNA (477bp) protein (159aa)
hypothetical protein Tax=RBG_16_RIF_WS3X_71_46_curated
Glyoxalase-like domain protein
hypothetical protein id=24418765 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Gloeobacter violaceus genus=Gloeobacter taxon_order=Gloeobacterales taxon_class=Gloeobacteria phylum=Cyanobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
13_1_20cm_4_scaffold_173_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

3252..5129
DNA (1878bp) protein (626aa)
Peptidase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0ME75_RHOM4
Peptidase {ECO:0000313|EMBL:AHG89716.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
peptidase
13_1_20cm_4_scaffold_173_9
Streptomyces venezuelae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5117..6232
DNA (1116bp) protein (372aa)
Uncharacterized protein n=1 Tax=Streptomyces venezuelae (strain ATCC 10712 / CBS 650.69 / DSM 40230 / JCM 4526 / NBRC 13096 / PD 04745) RepID=F2RBG1_STRVP
Uncharacterized protein {ECO:0000313|EMBL:CCA54289.1}; TaxID=953739 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces venezuelae (strain ATCC
hypothetical protein
13_1_20cm_4_scaffold_173_10
RBG_16_Zixibacteria_53_22_curated, Zixibacteria, Bacteria

Not on your lists

comp(6229..7638)
DNA (1410bp) protein (470aa)
NAD(P) transhydrogenase, beta subunit; K00325 NAD(P) transhydrogenase subunit beta [EC:1.6.1.2] Tax=RBG_16_Zixibacteria_53_22_curated
NAD(P) transhydrogenase subunit beta id=4381502 bin=GWC2_Ignavibacteria_56_12 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome rbh
NAD(P) transhydrogenase subunit beta
13_1_20cm_4_scaffold_173_11
RBG_16_Zixibacteria_53_22_curated, Zixibacteria, Bacteria

Not on your lists

comp(7635..7961)
DNA (327bp) protein (109aa)
nicotinamide nucleotide transhydrogenase subunit alpha; K00324 NAD(P) transhydrogenase subunit alpha [EC:1.6.1.2] Tax=RBG_16_Zixibacteria_53_22_curated
Nicotinamide nucleotide transhydrogenase, subunit alpha id=4913309 bin=GWA2_Ignavibacteria_55_11 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
nicotinamide nucleotide transhydrogenase subunit alpha
13_1_20cm_4_scaffold_173_12
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(7958..8941)
DNA (984bp) protein (328aa)
NAD/NADP transhydrogenase alpha subunit n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WP28_9CYAN
NAD/NADP transhydrogenase alpha subunit {ECO:0000313|EMBL:AFZ21539.1}; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus sp. PC
NAD/NADP transhydrogenase subunit alpha
13_1_20cm_4_scaffold_173_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(9052..9489)
DNA (438bp) protein (146aa)
TM2 domain protein n=1 Tax=Actinomyces sp. oral taxon 848 str. F0332 RepID=D0WPQ1_9ACTO
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_20cm_4_scaffold_173_14
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(9491..9946)
DNA (456bp) protein (152aa)
Thioredoxin n=1 Tax=Halomonas sp. PBN3 RepID=U7P842_9GAMM
Thioredoxin C-3 Tax=GWC2_Gemmatimonadetes_71_10_curated
thioredoxin
13_1_20cm_4_scaffold_173_15
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

comp(9954..10370)
DNA (417bp) protein (139aa)
endoribonuclease L-PSP Tax=RBG_16_Armatimonadetes_67_12_curated
hypothetical protein id=14632419 bin=bin9_gal15 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=bin9_gal15 organism_group=GAL15
endoribonuclease L-PSP
13_1_20cm_4_scaffold_173_16
RBG_13_Planctomycetes_62_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

10430..10999
DNA (570bp) protein (190aa)
hypothetical protein n=1 Tax=Schlesneria paludicola RepID=UPI00029AFDD3
hypothetical protein Tax=RBG_13_Planctomycetes_62_9_curated
hypothetical protein
13_1_20cm_4_scaffold_173_17
RBG_16_Caldithrix_48_16_curated, Caldithrix, Bacteria

Not on your lists

comp(11087..11746)
DNA (660bp) protein (220aa)
Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q6E7_9BACT id=5223510 bin=16ft_combo_ws3_JS1 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
diguanylate cyclase Tax=RBG_16_Caldithrix_48_16_curated
diguanylate cyclase
13_1_20cm_4_scaffold_173_18
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11833..12372)
DNA (540bp) protein (180aa)
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HG09_ANADF
Uncharacterized protein {ECO:0000313|EMBL:ABS27655.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" s
hypothetical protein
13_1_20cm_4_scaffold_173_19
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

12496..13581
DNA (1086bp) protein (362aa)
ada; regulatory protein Ada (EC:2.1.1.63); K10778 AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] T
Methylated-DNA--protein-cysteine methyltransferase n=1 Tax=Oceanibaculum indicum P24 RepID=K2J9K6_9PROT
methylated-DNA/protein-cysteine methyltransferase
13_1_20cm_4_scaffold_173_20
unknown

Not on your lists

comp(13708..14718)
DNA (1011bp) protein (337aa)

This feature has no annotations

13_1_20cm_4_scaffold_173_21
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

14871..16586
DNA (1716bp) protein (572aa)
Chloride channel core n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XGZ2_9BACT
Chloride channel core {ECO:0000313|EMBL:EEF60913.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosp
Chloride channel protein
13_1_20cm_4_scaffold_173_22
uncultured Acetothermia bacterium, Acetothermia, Bacteria

Not on your lists

16686..19478
DNA (2793bp) protein (931aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B54BDB rbh
Peptidase S8/S53 {ECO:0000313|EMBL:BAL55481.1}; TaxID=236499 species="Bacteria; Acetothermia; environmental samples.;" source="uncultured Acetothermia bacterium.;"
peptidase S8/S53 subtilisin kexin sedolisin
13_1_20cm_4_scaffold_173_23
unknown

Not on your lists

19493..20446
DNA (954bp) protein (318aa)

This feature has no annotations

13_1_20cm_4_scaffold_173_24
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(20457..22541)
DNA (2085bp) protein (695aa)
Peptidase S9 prolyl oligopeptidase active site domain protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MDI5_RHOM4 rbh
Peptidase S9 prolyl oligopeptidase active site domain protein {ECO:0000313|EMBL:ACY47178.1}; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; R
peptidase S9 prolyl oligopeptidase active site domain-containing protein
13_1_20cm_4_scaffold_173_25
GWA2_Bdellovibrionales_49_15_curated, Bacteroivoracaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(22637..23821)
DNA (1185bp) protein (395aa)
hypothetical protein Tax=GWA2_Bdellovibrionales_49_15_curated
hypothetical protein id=3889570 bin=GWA2__Bacteriovorax-rel_49_15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2__Bacteriovorax-rel_49_15 organism_group=Deltaproteobacteria
13_1_20cm_4_scaffold_173_26
GWA2_Bdellovibrionales_49_15_curated, Bacteroivoracaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(23823..25211)
DNA (1389bp) protein (463aa)
membrane bound O-acyl transferase MBOAT family protein Tax=GWA2_Bdellovibrionales_49_15_curated
Membrane bound O-acyl transferase MBOAT family protein id=3889652 bin=GWA2__Bacteriovorax-rel_49_15 species=Deinococcus maricopensis genus=Deinococcus taxon_order=Deinococcales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWA2__Bacteriovorax-rel_49_15 organism_group=Deltaproteobacteria
membrane bound O-acyl transferase MBOAT family protein
13_1_20cm_4_scaffold_173_27
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25249..26589)
DNA (1341bp) protein (447aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035DDEF2 rbh
Peptidase M38 family protein {ECO:0000313|EMBL:GAO42615.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumi
amidohydrolase
13_1_20cm_4_scaffold_173_28
unknown

Not on your lists

comp(26624..27160)
DNA (537bp) protein (179aa)

This feature has no annotations

13_1_20cm_4_scaffold_173_29
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(27170..28804)
DNA (1635bp) protein (545aa)
tre37A; trehalase tre37A (EC:3.2.1.28); K01194 alpha,alpha-trehalase [EC:3.2.1.28] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Cytoplasmic trehalase n=1 Tax=Cesiribacter andamanensis AMV16 RepID=M7N1H9_9BACT rbh
glycoside hydrolase family 37
13_1_20cm_4_scaffold_173_30
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

28881..29222
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U5L8_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:EFH80279.1}; Flags: Precursor;; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="
hypothetical protein
Displaying items 1-30 of 45 in total

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