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13_1_20cm_4_scaffold_186

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_186_1
unknown

Not on your lists

comp(3..83)
DNA (81bp) protein (27aa)

This feature has no annotations

13_1_20cm_4_scaffold_186_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(129..1802)
DNA (1674bp) protein (558aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5I6_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_20cm_4_scaffold_186_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

1880..3730
DNA (1851bp) protein (617aa)
ABC transporter ATP-binding protein n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002D4658C
ABC transporter-like protein; K06147 ATP-binding cassette, subfamily B, bacterial Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ABC transporter
13_1_20cm_4_scaffold_186_4
unknown

Not on your lists

4037..4435
DNA (399bp) protein (133aa)

This feature has no annotations

13_1_20cm_4_scaffold_186_5
unknown

Not on your lists

comp(4449..4856)
DNA (408bp) protein (136aa)

This feature has no annotations

13_1_20cm_4_scaffold_186_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

4930..6045
DNA (1116bp) protein (372aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01XE9_SOLUE
Uncharacterized protein {ECO:0000313|EMBL:AHG91799.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
protein of unknown function DUF6 transmembrane
13_1_20cm_4_scaffold_186_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(5855..6274)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7U6_NIAKG
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein
13_1_20cm_4_scaffold_186_8
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

6385..7572
DNA (1188bp) protein (396aa)
Major facilitator superfamily MFS_1 n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4ULD6_ANASK
major facilitator transporter Tax=RBG_16_Gemmatimonadetes_66_8_curated
major facilitator superfamily protein
13_1_20cm_4_scaffold_186_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

7632..9731
DNA (2100bp) protein (700aa)
Putative elongation factor G n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5I9_GEMAT
putative elongation factor G; K02355 elongation factor G Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
small GTP-binding protein
13_1_20cm_4_scaffold_186_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

10066..10650
DNA (585bp) protein (195aa)
Uncharacterized protein {ECO:0000313|EMBL:AHG89323.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein
hypothetical protein id=24418277 bin=RBG_19FT_COMBO_GAL15_69_19 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
13_1_20cm_4_scaffold_186_11
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

10647..12920
DNA (2274bp) protein (758aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00035D69AE rbh
Pyrrolo-quinoline quinone beta-propeller repeat-containing protein {ECO:0000313|EMBL:AHG88769.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Pyrrolo-quinoline quinone beta-propeller repeat-containing protein
13_1_20cm_4_scaffold_186_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(12995..14074)
DNA (1080bp) protein (360aa)
kamA; Lysine 2,3-aminomutase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
L-lysine 2,3-aminomutase id=3345172 bin=GWF2_Lentisphaerae_50_93 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
kamA; Lysine 2,3-aminomutase
13_1_20cm_4_scaffold_186_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(14046..14546)
DNA (501bp) protein (167aa)
acetyltransferase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Acetyltransferase, gnat family id=4178826 bin=GWA2_Ignavibacteria_55_11 species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
N-acetyltransferase GCN5
13_1_20cm_4_scaffold_186_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(14497..15516)
DNA (1020bp) protein (340aa)
D-alanine--D-alanine ligase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
D-alanine-D-alanine ligase-like protein id=2423735 bin=GWA2_Ignavibacteriae_54_16_partial species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteriae_54_16_partial organism_group=Ignavibacteria
ATP-grasp enzyme, D-alanine-D-alanine ligase
13_1_20cm_4_scaffold_186_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(15513..16598)
DNA (1086bp) protein (362aa)
D-alanine-D-alanine ligase-like protein n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6YWW1_MELRP
D-alanine-D-alanine ligase-like protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
D-alanine-D-alanine ligase-like protein
13_1_20cm_4_scaffold_186_16
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(16800..17552)
DNA (753bp) protein (251aa)
thyX; thymidylate synthase (EC:2.1.1.148); K03465 thymidylate synthase (FAD) [EC:2.1.1.148] Tax=GWC2_Gemmatimonadetes_71_10_curated
thyX; thymidylate synthase (EC:2.1.1.148)
Thymidylate synthase ThyX n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5J0_GEMAT
13_1_20cm_4_scaffold_186_17
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(17564..19165)
DNA (1602bp) protein (534aa)
Putative FAD linked oxidase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5J2_GEMAT
putative FAD linked oxidase; K06911 Tax=GWC2_Gemmatimonadetes_71_10_curated
FAD linked oxidase domain protein
13_1_20cm_4_scaffold_186_18
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

19241..20050
DNA (810bp) protein (270aa)
hypothetical protein n=1 Tax=Alicyclobacillus pohliae RepID=UPI000373C3C0
hypothetical protein; K09729 hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
13_1_20cm_4_scaffold_186_19
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(20004..20579)
DNA (576bp) protein (192aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_20cm_4_scaffold_186_20
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(20579..21160)
DNA (582bp) protein (194aa)
hypothetical protein n=1 Tax=Methylobacter marinus RepID=UPI00037C35C9
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_20cm_4_scaffold_186_21
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(21206..22093)
DNA (888bp) protein (296aa)
hbdA; 3-hydroxybutyryl-CoA dehydrogenase (EC:1.1.1.157) Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hbdA; 3-hydroxybutyryl-CoA dehydrogenase (EC:1.1.1.157)
3-hydroxybutyryl-CoA dehydrogenase (Beta-hydroxybutyryl-CoA dehydrogenase) (BHBD) n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJN9_9BACT
13_1_20cm_4_scaffold_186_22
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(22121..22963)
DNA (843bp) protein (281aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_20cm_4_scaffold_186_23
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(22966..23796)
DNA (831bp) protein (277aa)
Band 7 protein n=1 Tax=Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 / 2st14) RepID=E1QFY0_DESB2
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_20cm_4_scaffold_186_24
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(23809..25014)
DNA (1206bp) protein (402aa)
putative acyltransferase (EC:2.3.1.9); K07508 acetyl-CoA acyltransferase 2 [EC:2.3.1.16] Tax=RBG_16_Gemmatimonadetes_66_8_curated
acetyl-CoA acetyltransferase (EC:2.3.1.9)
Acetyl-CoA acetyltransferase n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UKM0_ANASK
13_1_20cm_4_scaffold_186_25
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(25153..26160)
DNA (1008bp) protein (336aa)
40-residue YVTN family beta-propeller repeat protein n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7PZT9_CATAD
surface antigen gene Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
40-residue YVTN family beta-propeller repeat-containing protein
13_1_20cm_4_scaffold_186_26
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(26209..27855)
DNA (1647bp) protein (549aa)
Gamma-glutamyltransferase n=1 Tax=uncultured bacterium W5-102b RepID=H9BWL7_9BACT rbh
gamma-glutamyltransferase Tax=RBG_16_Gemmatimonadetes_66_8_curated
gamma-glutamyltransferase
13_1_20cm_4_scaffold_186_27
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(27858..28814)
DNA (957bp) protein (319aa)
isocitrate dehydrogenase (EC:1.1.1.41) Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
Putative 3-isopropylmalate dehydrogenase n=2 Tax=Myxococcus xanthus RepID=Q1DCT3_MYXXD
3-isopropylmalate dehydrogenase
13_1_20cm_4_scaffold_186_28
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(28811..29473)
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5J8_GEMAT
Double zinc ribbon Tax=RBG_16_Gemmatimonadetes_66_8_curated
Double zinc ribbon
13_1_20cm_4_scaffold_186_29
RIFOXYD12_FULL_OD1_Wolfebacteria_48_21_curated, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

comp(29519..30586)
DNA (1068bp) protein (356aa)
amicyanin n=1 Tax=Methylobacterium sp. MB200 RepID=UPI00034AFFA1
blue (type 1) copper domain-containing protein Tax=RIFOXYD12_FULL_OD1_Wolfebacteria_48_21_curated
blue (type 1) copper domain protein
13_1_20cm_4_scaffold_186_30
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(30662..31165)
DNA (504bp) protein (168aa)
CMP/dCMP deaminase; K01493 dCMP deaminase [EC:3.5.4.12] Tax=RBG_16_Gemmatimonadetes_66_8_curated
deoxycytidylate deaminase (EC:3.5.4.12)
Cd allosteric enzyme id=3383322 bin=GWA1_Deltaproteobacteria_52_35 species=unknown genus=unknown taxon_order=Caudovirales taxon_class=unknown phylum=unknown tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
Displaying items 1-30 of 44 in total

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