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13_1_20cm_4_scaffold_250

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_250_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

1..2307
DNA (2307bp) protein (769aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABY7_GEMAT
Permease {ECO:0000313|EMBL:AHG88903.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
permease
13_1_20cm_4_scaffold_250_2
Gloeobacter violaceus, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

2304..4679
DNA (2376bp) protein (792aa)
Glr1271 protein n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NL55_GLOVI
Glr1271 protein {ECO:0000313|EMBL:BAC89212.1}; TaxID=251221 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter violaceus (strain PCC 7421).;"
hypothetical protein
13_1_20cm_4_scaffold_250_3
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(4690..5094)
DNA (405bp) protein (135aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
hypothetical protein id=12494007 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
13_1_20cm_4_scaffold_250_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

6144..7511
DNA (1368bp) protein (456aa)
Glr1418 protein n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NKQ9_GLOVI
Permease {ECO:0000313|EMBL:AHG89565.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
permease
13_1_20cm_4_scaffold_250_5
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

7606..8511
DNA (906bp) protein (302aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00035CCC07
zraR; sigma-54 dependent DNA-binding response regulator Tax=GWC2_Gemmatimonadetes_71_10_curated
sigma-54 factor interaction domain-containing protein
13_1_20cm_4_scaffold_250_6
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

8531..8821
DNA (291bp) protein (97aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01YY3_SOLUE
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:ABJ85132.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Cand
Fis family transcriptional regulator
13_1_20cm_4_scaffold_250_7
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

8811..10163
DNA (1353bp) protein (451aa)
Putative sensory box histidine kinase n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MWQ2_CORCM
multi-sensor signal transduction histidine kinase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
ntrY; putative sensory box histidine kinase
13_1_20cm_4_scaffold_250_8
Bradyrhizobium sp. WSM471, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10177..11157)
DNA (981bp) protein (327aa)
Fatty acid desaturase n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5YCN0_9BRAD
Fatty acid desaturase {ECO:0000313|EMBL:EHR01210.1}; TaxID=319017 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. W
fatty acid desaturase
13_1_20cm_4_scaffold_250_9
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(11690..13189)
DNA (1500bp) protein (500aa)
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8JFQ7_ANAD2 id=5223517 bin=16ft_combo_ws3_JS1 species=Anaeromyxobacter dehalogenans genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein Tax=RBG_16_RIF_WS3X_71_46_curated
hypothetical protein
13_1_20cm_4_scaffold_250_10
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

13344..14252
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MN20_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CBE68120.1}; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
hypothetical protein
13_1_20cm_4_scaffold_250_11
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14364..14996
DNA (633bp) protein (211aa)
two component LuxR family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
two component LuxR family transcriptional regulator id=14430684 bin=bin3_NC10 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=bin3_NC10 organism_group=NC10
LuxR family transcriptional regulator
13_1_20cm_4_scaffold_250_12
CG_Delta_03, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15103..16026
DNA (924bp) protein (308aa)
Response regulator receiver modulated diguanylate cyclase n=1 Tax=Thiorhodococcus drewsii AZ1 RepID=G2E142_9GAMM
response regulator receiver protein Tax=CG_Delta_03
response regulator/ggdef domain-containing protein
13_1_20cm_4_scaffold_250_13
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(16092..17306)
DNA (1215bp) protein (405aa)
56kDa selenium binding protein (SBP56) n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D8N0_SINAD
56kDa selenium binding protein (SBP56) {ECO:0000313|EMBL:AGA24986.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Sin
56kDa selenium binding protein (SBP56)
13_1_20cm_4_scaffold_250_14
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(17423..18346)
DNA (924bp) protein (308aa)
L-proline dehydrogenase (EC:1.5.99.8); K00318 proline dehydrogenase [EC:1.5.99.8] Tax=GWC2_Gemmatimonadetes_71_10_curated
Proline dehydrogenase n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SV36_9BACT id=5223515 bin=16ft_combo_ws3_JS1 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
putative proline dehydrogenase
13_1_20cm_4_scaffold_250_15
Streptomyces avermitilis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18585..19061)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NCIMB 12804 / NRRL 8165 / MA-4680) RepID=Q82PQ5_STRAW
Uncharacterized protein {ECO:0000313|EMBL:BAC68527.1}; TaxID=227882 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces avermitilis (strain ATC
hypothetical protein
13_1_20cm_4_scaffold_250_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(19318..20196)
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA91_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_20cm_4_scaffold_250_17
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

20357..21946
DNA (1590bp) protein (530aa)
hypothetical protein Tax=CSP1_2_Dadabacteria
hypothetical protein id=14425464 bin=bin1_lowGC species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
13_1_20cm_4_scaffold_250_18
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(21849..22496)
DNA (648bp) protein (216aa)
Fumarylacetoacetate hydrolase family protein n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N4N5_ANATU
fumarylacetoacetate hydrolase family protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
fumarylacetoacetate (FAA) hydrolase
13_1_20cm_4_scaffold_250_19
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

22659..23216
DNA (558bp) protein (186aa)
Elongation factor P n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=EFP_GEMAT
efp; elongation factor P; K02356 elongation factor P Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Elongation factor P
13_1_20cm_4_scaffold_250_20
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

23327..24361
DNA (1035bp) protein (345aa)
Aspartate aminotransferase (Transaminase a) (Aspat) {ECO:0000313|EMBL:ACM06574.1}; EC=2.6.1.1 {ECO:0000313|EMBL:ACM06574.1};; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicr
aspartate aminotransferase (transaminase a) (aspat) (EC:2.6.1.1)
Aspartate aminotransferase (Transaminase a) (Aspat) n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L3T8_THERP
13_1_20cm_4_scaffold_250_21
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24536..25795
DNA (1260bp) protein (420aa)
Threonine synthase n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HGE0_ANADF
Threonine synthase {ECO:0000313|EMBL:ABS27786.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source
threonine synthase
13_1_20cm_4_scaffold_250_22
Anaeromyxobacter sp. K, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25813..26088
DNA (276bp) protein (92aa)
ThiamineS protein n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UCF5_ANASK
ThiamineS protein {ECO:0000313|EMBL:ACG74791.1}; Flags: Precursor;; TaxID=447217 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromy
sulfur transfer protein ThiS
13_1_20cm_4_scaffold_250_23
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(26101..26949)
DNA (849bp) protein (283aa)
2-hydroxy-3-oxopropionate reductase (EC:1.1.1.60)
2-hydroxy-3-oxopropionate reductase n=1 Tax=Crinalium epipsammum PCC 9333 RepID=K9VWX4_9CYAN
Beta-hydroxyacid dehydrogenase, 3-hydroxyisobutyrate dehydrogenase {ECO:0000313|EMBL:CDM65852.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyr
13_1_20cm_4_scaffold_250_24
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

27051..28019
DNA (969bp) protein (323aa)
qor; quinone oxidoreductase (EC:1.6.5.5) Tax=GWA2_Rokubacteria_73_35_curated
Quinone oxidoreductase (NADPH:quinone reductase) id=4380010 bin=GWA2_Methylomirabilis_73_35 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Alcohol dehydrogenase zinc-binding domain protein
13_1_20cm_4_scaffold_250_25
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

28041..28733
DNA (693bp) protein (231aa)
HAD-superfamily hydrolase, subfamily IA, variant 3 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01Y47_SOLUE
Haloacid dehalogenase superfamily enzyme, subfamily IA {ECO:0000313|EMBL:CDM64161.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas met
HAD family hydrolase
13_1_20cm_4_scaffold_250_26
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28791..30080)
DNA (1290bp) protein (430aa)
Putative uncharacterized protein n=1 Tax=uncultured nuHF2 cluster bacterium HF0500_31B05 RepID=E7C5Y0_9BACT
hypothetical protein Tax=RBG_16_Deltaproteobacteria_54_11_curated
hypothetical protein
13_1_20cm_4_scaffold_250_27
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(30103..32319)
DNA (2217bp) protein (739aa)
TonB-dependent receptor n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MGY8_RHOM4 rbh
TonB-dependent receptor {ECO:0000313|EMBL:ACY47773.1}; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source
TonB-dependent receptor
13_1_20cm_4_scaffold_250_28
unknown

Not on your lists

comp(32353..32580)
DNA (228bp) protein (76aa)

This feature has no annotations

13_1_20cm_4_scaffold_250_29
Alkalilimnicola ehrlichii, Alkalilimnicola, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32802..33932
DNA (1131bp) protein (377aa)
Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit {ECO:0000313|EMBL:ABI56517.1}; EC=4.1.1.39 {ECO:0000313|EMBL:ABI56517.1};; TaxID=187272 species="Bacteria; Proteobacteria; Gammaproteobact
ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (EC:4.1.1.39)
Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit n=1 Tax=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) RepID=Q0A9H0_ALKEH
13_1_20cm_4_scaffold_250_30
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

33925..34329
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BMZ5_9GAMM
cupin Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
cupin
Displaying items 1-30 of 36 in total

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