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13_1_20cm_4_scaffold_388

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_388_1
unknown

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2..70
DNA (69bp) protein (23aa)

This feature has no annotations

13_1_20cm_4_scaffold_388_2
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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74..889
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4K5_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:BAH39030.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
hypothetical protein
13_1_20cm_4_scaffold_388_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

900..1268
DNA (369bp) protein (123aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_20cm_4_scaffold_388_4
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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1275..2237
DNA (963bp) protein (321aa)
trxB1; thioredoxin-disulfide reductase (EC:1.8.1.9); K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9] Tax=GWC2_Gemmatimonadetes_71_10_curated
thioredoxin reductase n=1 Tax=Sporolactobacillus vineae RepID=UPI000287D224
thioredoxin reductase
13_1_20cm_4_scaffold_388_5
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

2234..2872
DNA (639bp) protein (213aa)
hydrolase Tax=GWC2_Gemmatimonadetes_71_10_curated
Zn-dependent hydrolases, including glyoxylases id=14429445 bin=bin3_NC10 species=Chthonomonas calidirosea genus=Chthonomonas taxon_order=Chthonomonadales taxon_class=Chthonomonadetes phylum=Armatimonadetes tax=bin3_NC10 organism_group=NC10
beta-lactamase domain protein
13_1_20cm_4_scaffold_388_6
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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2993..3904
DNA (912bp) protein (304aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEB4_GEMAT
Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical membrane protein
13_1_20cm_4_scaffold_388_7
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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3901..4149
DNA (249bp) protein (83aa)
Alkylhydroperoxidase AhpD n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IQL0_KORVE
Alkylhydroperoxidase AhpD {ECO:0000313|EMBL:ABF40840.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (str
alkylhydroperoxidase
13_1_20cm_4_scaffold_388_8
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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4168..4452
DNA (285bp) protein (95aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Kted
Alkylhydroperoxidase like protein, AhpD family n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TI11_9CHLR
hypothetical protein
13_1_20cm_4_scaffold_388_9
BJP_IG2069_Anaerolineales_43_63, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

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comp(4453..4785)
DNA (333bp) protein (111aa)
Putative uncharacterized protein n=1 Tax=uncultured Acidobacteria bacterium RepID=Q7X350_9BACT
cupin 2 barrel domain-containing protein
Tax=BJP_IG2069_Anaerolineales_43_63
13_1_20cm_4_scaffold_388_10
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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4838..6247
DNA (1410bp) protein (470aa)
aspA; aspartate ammonia-lyase (EC:4.3.1.1); K01744 aspartate ammonia-lyase [EC:4.3.1.1] Tax=GWC2_Gemmatimonadetes_71_10_curated
aspA; aspartate ammonia-lyase (EC:4.3.1.1)
Aspartate ammonia-lyase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4K1_GEMAT
13_1_20cm_4_scaffold_388_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

6276..6698
DNA (423bp) protein (141aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_20cm_4_scaffold_388_12
unknown

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6769..7812
DNA (1044bp) protein (348aa)

This feature has no annotations

13_1_20cm_4_scaffold_388_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

7900..8352
DNA (453bp) protein (151aa)
Rrf2 family DNA-binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4K0_GEMAT
Rrf2 family DNA-binding protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
transcriptional regulator, Rrf2 family
13_1_20cm_4_scaffold_388_14
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

8427..9278
DNA (852bp) protein (284aa)
rhodanese domain-containing protein; K01011 thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000367BB3A
rhodanese domain-containing protein
13_1_20cm_4_scaffold_388_15
RBG_16_Chloroflexi_54_18_curated, Chloroflexi, Bacteria

Not on your lists

9275..10246
DNA (972bp) protein (324aa)
cysteine synthase B; K12339 cysteine synthase B [EC:2.5.1.47] Tax=RBG_16_Chloroflexi_54_18_curated
cysteine synthase (EC:2.5.1.47)
Cysteine synthase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LKA1_CHLTF
13_1_20cm_4_scaffold_388_16
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

10243..10686
DNA (444bp) protein (148aa)
Putative metal-dependent protease of the PAD1/JAB1 superfamily n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LKA0_CHLTF
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
putative metal-dependent protease
13_1_20cm_4_scaffold_388_17
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

10677..12104
DNA (1428bp) protein (476aa)
Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LK99_CHLTF id=5224911 bin=16ft_combo_ws3_JS1 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
MoaD family protein {ECO:0000313|EMBL:CDM66173.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
molybdopterin and thiamine biosynthesis family dinucleotide-utilizing protein
13_1_20cm_4_scaffold_388_trna_1
unknown

Not on your lists

comp(12206..12289)
DNA (84bp)
transferRNA
13_1_20cm_4_scaffold_388_18
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

12461..12838
DNA (378bp) protein (126aa)
single-stranded DNA-binding protein n=1 Tax=Nocardiopsis potens RepID=UPI00034A49AD
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
SsrA-binding protein
13_1_20cm_4_scaffold_388_19
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

12835..13776
DNA (942bp) protein (314aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28); K01448 N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
hypothetical protein n=1 Tax=Cloacimonetes bacterium SCGC AAA252-O17 RepID=UPI00036B10EE
Displaying 20 items

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