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13_1_20cm_4_scaffold_506

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Displaying items 1-30 of 33 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_506_1
unknown

Not on your lists

3..188
DNA (186bp) protein (62aa)

This feature has no annotations

13_1_20cm_4_scaffold_506_2
unknown

Not on your lists

185..550
DNA (366bp) protein (122aa)

This feature has no annotations

13_1_20cm_4_scaffold_506_3
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

670..1755
DNA (1086bp) protein (362aa)
dinB; DNA polymerase IV (EC:2.7.7.7); K02346 DNA polymerase IV [EC:2.7.7.7] Tax=GWC2_Gemmatimonadetes_71_10_curated
dinB; DNA polymerase IV (EC:2.7.7.7)
DNA polymerase IV n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9Y5_GEMAT
13_1_20cm_4_scaffold_506_4
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1789..2202)
DNA (414bp) protein (138aa)
acT domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
acT domain-containing protein id=14429420 bin=bin3_NC10 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=bin3_NC10 organism_group=NC10
acT domain-containing protein
13_1_20cm_4_scaffold_506_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(2277..3632)
DNA (1356bp) protein (452aa)
putative S1B family peptidase (EC:3.4.21.-) Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
putative S1B family peptidase (EC:3.4.21.-)
Putative S1B family peptidase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3U7_GEMAT
13_1_20cm_4_scaffold_506_6

Not on your lists

3775..7119
DNA (3345bp) protein (1115aa)
Glycosyl hydrolase BNR repeat-containing protein n=2 Tax=mine drainage metagenome RepID=T1C3I3_9ZZZZ
Glycosyl hydrolase BNR repeat-containing protein {ECO:0000313|EMBL:EQD75448.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
BNR/Asp-box repeat-containing protein
13_1_20cm_4_scaffold_506_7
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(7149..7733)
DNA (585bp) protein (195aa)
Lipoprotein n=1 Tax=Rhodopirellula maiorica SM1 RepID=M5RG89_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:AHG93147.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
protein of unknown function DUF4349
13_1_20cm_4_scaffold_506_8
Balneola vulgaris, Balneola, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7897..8628
DNA (732bp) protein (244aa)
hypothetical protein n=1 Tax=Balneola vulgaris RepID=UPI0003762967
13_1_20cm_4_scaffold_506_9
unknown

Not on your lists

8652..8948
DNA (297bp) protein (99aa)

This feature has no annotations

13_1_20cm_4_scaffold_506_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

8951..9676
DNA (726bp) protein (242aa)
Methyltransferase type 11 {ECO:0000313|EMBL:AHG89024.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Methyltransferase type 11
13_1_20cm_4_scaffold_506_11
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(9684..14240)
DNA (4557bp) protein (1519aa)
Glutamate synthase [NADPH] large chain {ECO:0000313|EMBL:BAH40123.1}; EC=1.4.1.13 {ECO:0000313|EMBL:BAH40123.1};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae;
gltB; glutamate synthase [NADPH] large chain (EC:1.4.1.13)
Glutamate synthase [NADPH] large chain n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC96_GEMAT
13_1_20cm_4_scaffold_506_12
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(14488..15327)
DNA (840bp) protein (280aa)
PEP phosphonomutase-like protein Tax=CSP1_6_Rokubacteria
PEP phosphonomutase-like protein id=14626847 bin=bin7_NC10_sister species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_20cm_4_scaffold_506_13
Hymenobacter swuensis, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

15450..17660
DNA (2211bp) protein (737aa)
Dipeptidyl-peptidase IV n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SI26_RHOMR
Putative dipeptidyl peptidase IV {ECO:0000313|EMBL:AHJ95689.1}; TaxID=1227739 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter swuensis D
Putative dipeptidyl peptidase IV
13_1_20cm_4_scaffold_506_14
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17664..18941
DNA (1278bp) protein (426aa)
Major facilitator superfamily MFS_1 n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8J9R1_ANAD2 rbh
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ACL67449.1}; TaxID=455488 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyx
major facilitator superfamily protein
13_1_20cm_4_scaffold_506_15
Enhygromyxa salina, Enhygromyxa, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18938..20290
DNA (1353bp) protein (451aa)
Acyltransferase domain protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G1V1_9DELT
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000313|EMBL:KIG17790.1}; TaxID=215803 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Enhygromyxa.;" source="Enhygromyxa sali
acyltransferase domain-containing protein
13_1_20cm_4_scaffold_506_16
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(20287..21066)
DNA (780bp) protein (260aa)
Tetratricopeptide repeat protein n=1 Tax=Cylindrospermum stagnale PCC 7417 RepID=K9WXT5_9NOST
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
peptidase S1 and S6 chymotrypsin/Hap
13_1_20cm_4_scaffold_506_17
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(21234..22490)
DNA (1257bp) protein (419aa)
Fis family two component sigma-54 specific transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
Two component, sigma54 specific, transcriptional regulator, Fis family id=2085290 bin=GWA2_Methylomirabilis_73_35 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Fis family two component sigma54 specific transcriptional regulator
13_1_20cm_4_scaffold_506_18
Anaeromyxobacter sp. K, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22487..24166)
DNA (1680bp) protein (560aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=447217 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cy
integral membrane sensor signal transduction histidine kinase (EC:2.7.13.3)
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UAW7_ANASK
13_1_20cm_4_scaffold_506_19
Saccharomonospora azurea, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24163..25491)
DNA (1329bp) protein (443aa)
ABC-type dipeptide transport system, periplasmic component n=2 Tax=Saccharomonospora azurea RepID=H8GEY6_9PSEU
ABC-type dipeptide transport system, periplasmic component {ECO:0000313|EMBL:EHY91017.1}; Flags: Precursor;; TaxID=882081 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Sacc
extracellular solute-binding protein family 5
13_1_20cm_4_scaffold_506_20
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(25562..25957)
DNA (396bp) protein (132aa)
methylmalonyl-CoA epimerase; K05606 methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Methylmalonyl-CoA epimerase id=2028469 bin=GWB2_Chloroflexi_49_20 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
Glyoxalase-like domain protein
13_1_20cm_4_scaffold_506_21
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

26065..26439
DNA (375bp) protein (125aa)
Four helix bundle protein n=1 Tax=Capnocytophaga granulosa ATCC 51502 RepID=S2WM11_9FLAO
S23 ribosomal protein Tax=RBG_16_Planctomycetes_55_9_curated
S23 ribosomal protein
13_1_20cm_4_scaffold_506_22
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26465..27508)
DNA (1044bp) protein (348aa)
peptidylarginine deiminase-like protein (EC:3.5.3.12); K10536 agmatine deiminase [EC:3.5.3.12] Tax=GWA2_Deltaproteobacteria_65_63_curated
peptidylarginine deiminase-like protein (EC:3.5.3.12)
Peptidylarginine deiminase-like enzyme id=4332731 bin=GWA2_Deltaproteo_65_63 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
13_1_20cm_4_scaffold_506_23
CG_Delta_02, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27561..28367)
DNA (807bp) protein (269aa)
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; K12251 N-carbamoylputrescine amidase [EC:3.5.1.53] Tax=CG_Delta_02
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase id=2854538 bin=GWC2_Deltaproteobacteria_66_88 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria
aguB; N-carbamoylputrescine amidase
13_1_20cm_4_scaffold_506_24
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28457..29836
DNA (1380bp) protein (460aa)
hypothetical protein n=1 Tax=Balneola vulgaris RepID=UPI00036617BF rbh
Uncharacterized protein {ECO:0000313|EMBL:EYF08143.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondrom
hypothetical protein
13_1_20cm_4_scaffold_506_25
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

29833..30954
DNA (1122bp) protein (374aa)
Beta-lactamase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XQP6_9BACT
Beta-lactamase {ECO:0000313|EMBL:EEF57828.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" so
beta-lactamase
13_1_20cm_4_scaffold_506_26
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(30951..31670)
DNA (720bp) protein (240aa)
hypothetical protein n=1 Tax=Balneola vulgaris RepID=UPI0003797C25
Uncharacterized protein {ECO:0000313|EMBL:AHG89050.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein
13_1_20cm_4_scaffold_506_27
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(31688..32377)
DNA (690bp) protein (230aa)
OmpR family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8B6_GEMAT
Response regulator receiver {ECO:0000313|EMBL:AHG87878.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
response regulator receiver
13_1_20cm_4_scaffold_506_28
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(32374..34041)
DNA (1668bp) protein (556aa)
Two-component histidine kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8B7_GEMAT
two-component histidine kinase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ATP-binding region ATPase domain protein
13_1_20cm_4_scaffold_506_29
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

34368..34844
DNA (477bp) protein (159aa)
Phosphatidylethanolamine-binding protein n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SRR7_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PEBP family protein
13_1_20cm_4_scaffold_506_30
unknown

Not on your lists

34841..35488
DNA (648bp) protein (216aa)

This feature has no annotations

Displaying items 1-30 of 33 in total

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