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13_1_20cm_4_scaffold_55

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Displaying items 1-30 of 32 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_55_1
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(3..281)
DNA (279bp) protein (93aa)
putative methyltransferase; K02493 release factor glutamine methyltransferase [EC:2.1.1.-] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Release factor glutamine methyltransferase n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NJ13_ROSCS
HemK family modification methylase
13_1_20cm_4_scaffold_55_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(379..1437)
DNA (1059bp) protein (353aa)
Peptide chain release factor 1 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7L6_GEMAT
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium
Peptide chain release factor 1
13_1_20cm_4_scaffold_55_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists


comp(1441..1653)
DNA (213bp) protein (71aa)
50S ribosomal protein L31 n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=RL31_THIDA
50S ribosomal protein L31; K02909 large subunit ribosomal protein L31 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
rpmE; 50S ribosomal protein L31
13_1_20cm_4_scaffold_55_4
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

1806..2477
DNA (672bp) protein (224aa)
Crp family transcriptional regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7L5_GEMAT
Crp family transcriptional regulator Tax=GWC2_Gemmatimonadetes_71_10_curated
Crp family transcriptional regulator
13_1_20cm_4_scaffold_55_5
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

2585..3451
DNA (867bp) protein (289aa)
Metal-dependent hydrolase, beta-lactamase superfamily I n=1 Tax=Cyanobium gracile (strain ATCC 27147 / PCC 6307) RepID=K9P7N2_CYAGP
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
beta-lactamase superfamily metal-dependent hydrolase
13_1_20cm_4_scaffold_55_6
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

3467..4177
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEH8_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_20cm_4_scaffold_55_7
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

4237..6123
DNA (1887bp) protein (629aa)
metal dependent phosphohydrolase Tax=GWC2_Gemmatimonadetes_71_10_curated
Metal dependent phosphohydrolase id=4372559 bin=GWA2_Planctomycetia_40_7 species=Chloroherpeton thalassium genus=Chloroherpeton taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWA2_Planctomycetia_40_7 organism_group=Planctomycetes
metal dependent phosphohydrolase
13_1_20cm_4_scaffold_55_8
Gloeobacter violaceus, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

comp(6120..6476)
DNA (357bp) protein (119aa)
Gll2265 protein n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NIB8_GLOVI
Gll2265 protein {ECO:0000313|EMBL:BAC90206.1}; TaxID=251221 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter violaceus (strain PCC 7421).;"
hypothetical protein
13_1_20cm_4_scaffold_55_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(6473..8041)
DNA (1569bp) protein (523aa)
5-oxoprolinase; K01474 N-methylhydantoinase B [EC:3.5.2.14] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
5-oxoprolinase (ATP-hydrolyzing) n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ATD9_RUBXD
N-methylhydantoinase B/acetone carboxylase alpha subunit
13_1_20cm_4_scaffold_55_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(8038..10071)
DNA (2034bp) protein (678aa)
5-oxoprolinase; K01473 N-methylhydantoinase A [EC:3.5.2.14] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Hydantoin utilization protein A n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7L1_GEMAT rbh
hyuA; hydantoin utilization protein A
13_1_20cm_4_scaffold_55_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(10118..11656)
DNA (1539bp) protein (513aa)
lnt; apolipoprotein N-acyltransferase; K03820 apolipoprotein N-acyltransferase [EC:2.3.1.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Apolipoprotein N-acyltransferase id=4703362 bin=GWC2_Pelobacter_58_13 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
lnt; apolipoprotein N-acyltransferase
13_1_20cm_4_scaffold_55_12
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(11653..12660)
DNA (1008bp) protein (336aa)
Putative oxidoreductase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7K9_GEMAT
putative oxidoreductase Tax=GWC2_Gemmatimonadetes_71_10_curated
oxidoreductase domain protein
13_1_20cm_4_scaffold_55_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(12657..13301)
DNA (645bp) protein (215aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_20cm_4_scaffold_55_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(13309..14457)
DNA (1149bp) protein (383aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7K8_GEMAT
hypothetical protein; K06381 stage II sporulation protein D Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
SpoIID/LytB domain protein
13_1_20cm_4_scaffold_55_15
Thermosynechococcus sp. NK55a, Thermosynechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(14537..15823)
DNA (1287bp) protein (429aa)
Glutamate-1-semialdehyde 2,1-aminomutase {ECO:0000256|HAMAP-Rule:MF_00375, ECO:0000256|SAAS:SAAS00088818}; Short=GSA {ECO:0000256|HAMAP-Rule:MF_00375};; EC=5.4.3.8 {ECO:0000256|HAMAP-Rule:MF_00375, EC
hemL; glutamate-1-semialdehyde aminomutase HemL (EC:5.4.3.8)
Glutamate-1-semialdehyde aminomutase HemL n=1 Tax=Thermosynechococcus sp. NK55 RepID=V5V821_9CHRO rbh
13_1_20cm_4_scaffold_55_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(15820..17139)
DNA (1320bp) protein (440aa)
hypothetical protein; K14441 ribosomal protein S12 methylthiotransferase [EC:2.-.-.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7K6_GEMAT
Ribosomal protein S12 methylthiotransferase rimO
13_1_20cm_4_scaffold_55_17
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(17136..17639)
DNA (504bp) protein (168aa)
hypothetical protein; K09767 hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
UPF0234 protein yajQ
hypothetical protein; K09767 hypothetical protein id=12555050 bin=CNBR_ACIDO species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
13_1_20cm_4_scaffold_55_18
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(17667..18524)
DNA (858bp) protein (286aa)
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7K2_GEMAT
RNA polymerase sigma factor; K03086 RNA polymerase primary sigma factor Tax=RBG_16_Gemmatimonadetes_66_8_curated
RNA polymerase sigma factor, sigma-70 family
13_1_20cm_4_scaffold_55_19
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(18626..19396)
DNA (771bp) protein (257aa)
signal peptidase I (EC:3.4.21.89); K03100 signal peptidase I [EC:3.4.21.89] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Signal peptidase I n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC84_GEMAT
signal peptidase I
13_1_20cm_4_scaffold_55_20
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(19730..21220)
DNA (1491bp) protein (497aa)
Aldehyde dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7K0_GEMAT
Aldehyde Dehydrogenase {ECO:0000313|EMBL:AHG90457.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Aldehyde Dehydrogenase
13_1_20cm_4_scaffold_55_21
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(21241..21741)
DNA (501bp) protein (167aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7J9_GEMAT
hypothetical membrane protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical membrane protein
13_1_20cm_4_scaffold_55_22
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(21741..23129)
DNA (1389bp) protein (463aa)
Putative NtrC family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7J8_GEMAT
putative NtrC family two-component response regulator Tax=RBG_16_Gemmatimonadetes_66_8_curated
putative NtrC family two-component response regulator
13_1_20cm_4_scaffold_55_23
unknown

Not on your lists

comp(23126..23770)
DNA (645bp) protein (215aa)

This feature has no annotations

13_1_20cm_4_scaffold_55_24

Not on your lists

comp(23778..24335)
DNA (558bp) protein (186aa)
2'-5' RNA ligase n=1 Tax=uncultured prokaryote RepID=H5SIR3_9ZZZZ
2'-5' RNA ligase {ECO:0000313|EMBL:BAL56049.1}; TaxID=198431 species="unclassified sequences; environmental samples.;" source="uncultured prokaryote.;"
2'-5' RNA ligase
13_1_20cm_4_scaffold_55_25
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(24332..25141)
DNA (810bp) protein (270aa)
Putative uncharacterized protein n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SUC4_9BACT
hypothetical protein; K06864 uncharacterized protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
Conserved hypothetical protein CHP00268
13_1_20cm_4_scaffold_55_26
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25300..25785
DNA (486bp) protein (162aa)
Transcriptional regulator, AsnC family n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P479_9BACT
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:ACV79279.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (
AsnC family transcriptional regulator
13_1_20cm_4_scaffold_55_27
Peptococcaceae bacterium BRH_c4b, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25787..26761
DNA (975bp) protein (325aa)
Putative membrane protein n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2EFN6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJS17429.1}; TaxID=1629717 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c4b.;"
protein of unknown function DUF6 transmembrane
13_1_20cm_4_scaffold_55_28
Brevibacillus brevis, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

26808..27167
DNA (360bp) protein (120aa)
Putative uncharacterized protein n=1 Tax=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) RepID=C0ZJ38_BREBN
Putative uncharacterized protein {ECO:0000313|EMBL:BAH45413.1}; TaxID=358681 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus brevis (strain
hypothetical protein
13_1_20cm_4_scaffold_55_29
RBG_16_Gammaproteobacteria_66_13_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27133..27477
DNA (345bp) protein (115aa)
antibiotic biosynthesis monooxygenase Tax=RBG_16_Gammaproteobacteria_66_13_curated
antibiotic biosynthesis monooxygenase id=1245775 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
hypothetical protein
13_1_20cm_4_scaffold_55_30
CG_Ignavi_02, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(27502..28452)
DNA (951bp) protein (317aa)
hypothetical protein n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00035CE211
transporter, MscS family Tax=CG_Ignavi_02
mechanosensitive ion channel protein MscS
Displaying items 1-30 of 32 in total

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