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13_1_20cm_4_scaffold_65

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Displaying items 1-30 of 57 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_65_1
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(3..485)
DNA (483bp) protein (161aa)
pyrG; CTP synthetase (EC:6.3.4.2); K01937 CTP synthase [EC:6.3.4.2] Tax=GWC2_Gemmatimonadetes_71_10_curated
pyrG; CTP synthetase (EC:6.3.4.2)
CTP synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8V6_GEMAT
13_1_20cm_4_scaffold_65_2
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(482..1231)
DNA (750bp) protein (250aa)
kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (EC:2.7.7.38); K00979 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_
3-deoxy-manno-octulosonate cytidylyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=KDSB_GEMAT
3-deoxy-manno-octulosonate cytidylyltransferase
13_1_20cm_4_scaffold_65_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1263..1853)
DNA (591bp) protein (197aa)
Glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase n=1 Tax=Brevibacillus sp. BC25 RepID=J2PD88_9BACL
glutamine amidotransferase of anthranilate synthase Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
pabA; para-aminobenzoate/anthranilate synthase glutamine amidotransferase component II
13_1_20cm_4_scaffold_65_4
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(1862..2149)
DNA (288bp) protein (96aa)
competence-specific genes regulator Tax=RBG_16_Gemmatimonadetes_66_8_curated
Regulator of competence-specific genes id=1880626 bin=GWD2_Nitrospirae-related_57_8 species=Desulfosporosinus meridiei genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
competence-specific genes regulator
13_1_20cm_4_scaffold_65_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(2230..2502)
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AD18_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:AHG93410.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein
13_1_20cm_4_scaffold_65_6
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(2527..3450)
DNA (924bp) protein (308aa)
Tyrosine recombinase XerC n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8W1_GEMAT
xerD; tyrosine recombinase XerD; K04763 integrase/recombinase XerD Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Tyrosine recombinase xerC
13_1_20cm_4_scaffold_65_7
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3459..3872)
DNA (414bp) protein (138aa)
short-chain dehydrogenase n=1 Tax=Nevskia ramosa RepID=UPI0003B6EA45
Putative oxidoreductase/Short-chain dehydrogenase {ECO:0000313|EMBL:AKF04063.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sanda
hypothetical protein
13_1_20cm_4_scaffold_65_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

4324..5721
DNA (1398bp) protein (466aa)
Gluconate permease gntP n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C503_9PLAN
Gluconate transporter {ECO:0000313|EMBL:AHG89662.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Gluconate transporter
13_1_20cm_4_scaffold_65_9
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5732..7732
DNA (2001bp) protein (667aa)
YjhG/YagF family dehydratase (EC:4.2.1.9)
Dehydratase, YjhG/YagF family n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WX44_PSEUU
Dehydratase {ECO:0000313|EMBL:AKC88214.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwone
13_1_20cm_4_scaffold_65_10

Not on your lists

7729..8718
DNA (990bp) protein (330aa)
gluconolactonase n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B34645
Gluconolactonase {ECO:0000313|EMBL:AHZ46187.1}; TaxID=1497526 species="Bacteria; environmental samples.;" source="uncultured bacterium N27-1E.;"
gluconolactonase
13_1_20cm_4_scaffold_65_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(8715..9317)
DNA (603bp) protein (201aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8W2_GEMAT
hypothetical membrane protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical membrane protein
13_1_20cm_4_scaffold_65_12

Not on your lists

comp(9314..9781)
DNA (468bp) protein (156aa)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Uliginosibacterium gangwonense RepID=UPI00037F9877
Marine sediment metagenome DNA, contig: S03H2_L01930 {ECO:0000313|EMBL:GAH39815.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
13_1_20cm_4_scaffold_65_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(9815..10210)
DNA (396bp) protein (132aa)
Phosphoribosylaminoimidazole carboxylase, catalytic subunit (EC:5.4.99.18)
N5-carboxyaminoimidazole ribonucleotide mutase n=2 Tax=Cloacimonetes RepID=B0VG29_CLOAI
5-(carboxyamino)imidazole ribonucleotide mutase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_20cm_4_scaffold_65_14
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(10210..11253)
DNA (1044bp) protein (348aa)
Cyclic dehypoxanthine futalosine synthase {ECO:0000256|HAMAP-Rule:MF_00992}; Short=Cyclic DHFL synthase {ECO:0000256|HAMAP-Rule:MF_00992};; EC=1.21.98.1 {ECO:0000256|HAMAP-Rule:MF_00992};; Dehypoxanth
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8W4_GEMAT
menaquinone biosynthesis protein
13_1_20cm_4_scaffold_65_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(11256..12077)
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8W5_GEMAT
hypothetical protein; K07081 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_20cm_4_scaffold_65_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(12178..13425)
DNA (1248bp) protein (416aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8W6_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
putative menaquinone biosynthesis protein
13_1_20cm_4_scaffold_65_17
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(13442..14560)
DNA (1119bp) protein (373aa)
3-oxoacyl-(acyl-carrier-protein) synthase II (EC:2.3.1.41); K09458 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] Tax=RBG_16_Gemmatimonadetes_66_8_curated
3-oxoacyl-(acyl-carrier-protein) synthase II (EC:2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6PLG0_9FIRM
13_1_20cm_4_scaffold_65_18
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(14565..14816)
DNA (252bp) protein (84aa)
Acyl carrier protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=ACP_GEMAT
acpP; acyl carrier protein; K02078 acyl carrier protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
acpP; acyl carrier protein
13_1_20cm_4_scaffold_65_19
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(14848..15585)
DNA (738bp) protein (246aa)
fabG; 3-oxoacyl-ACP reductase (EC:1.1.1.100); K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
3-oxoacyl-[acyl-carrier protein] reductase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8W9_GEMAT
3-oxoacyl-(acyl-carrier-protein) reductase
13_1_20cm_4_scaffold_65_20
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(15605..16351)
DNA (747bp) protein (249aa)
fabD; malonyl CoA-acyl carrier protein transacylase (EC:2.3.1.39); K00645 [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] Tax=GWC2_Gemmatimonadetes_71_10_curated
fabD; malonyl CoA-acyl carrier protein transacylase (EC:2.3.1.39)
Malonyl CoA-acyl carrier protein transacylase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8X0_GEMAT
13_1_20cm_4_scaffold_65_21
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(16399..17385)
DNA (987bp) protein (329aa)
fabH; 3-oxoacyl-ACP synthase III (EC:2.3.1.180); K00648 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8X1_GEMAT
3-oxoacyl-[acyl-carrier-protein] synthase 3
13_1_20cm_4_scaffold_65_22
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(17382..18389)
DNA (1008bp) protein (336aa)
plsX; fatty acid/phospholipid synthesis protein PlsX; K03621 glycerol-3-phosphate acyltransferase PlsX [EC:2.3.1.15] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Phosphate acyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8X2_GEMAT
Phosphate acyltransferase
13_1_20cm_4_scaffold_65_23
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists


comp(18391..18570)
DNA (180bp) protein (60aa)
50S ribosomal protein L32 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RL32_GEMAT
rpmF; 50S ribosomal protein L32; K02911 large subunit ribosomal protein L32 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
rpmF; 50S ribosomal protein L32
13_1_20cm_4_scaffold_65_24
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(18583..19092)
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8X4_GEMAT
hypothetical protein; K07040 uncharacterized protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
protein of unknown function DUF177
13_1_20cm_4_scaffold_65_25
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(19127..19546)
DNA (420bp) protein (140aa)
ndk; nucleoside diphosphate kinase (EC:2.7.4.6); K00940 nucleoside-diphosphate kinase [EC:2.7.4.6] Tax=GWC2_Gemmatimonadetes_71_10_curated
Nucleoside diphosphate kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8X5_GEMAT
nucleoside diphosphate kinase
13_1_20cm_4_scaffold_65_26
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(19548..20456)
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8X6_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
CBS domain containing protein
13_1_20cm_4_scaffold_65_27
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(20453..21322)
DNA (870bp) protein (290aa)
sucD; succinyl-CoA synthetase alpha chain (EC:6.2.1.5); K01902 succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
sucD; succinyl-CoA synthetase alpha chain (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit alpha n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8X7_GEMAT
13_1_20cm_4_scaffold_65_28
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(21319..22452)
DNA (1134bp) protein (378aa)
sucC; succinyl-CoA synthetase beta chain (EC:6.2.1.5); K01903 succinyl-CoA synthetase beta subunit [EC:6.2.1.5] Tax=GWC2_Gemmatimonadetes_71_10_curated
Succinyl-CoA ligase [ADP-forming] subunit beta n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=SUCC_GEMAT
Succinyl-CoA ligase [ADP-forming] subunit beta
13_1_20cm_4_scaffold_65_29
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(22449..23399)
DNA (951bp) protein (317aa)
carbamate kinase (EC:2.7.2.2); K00926 carbamate kinase [EC:2.7.2.2] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
carbamate kinase (EC:2.7.2.2)
carbamate kinase n=1 Tax=Marinimicrobia bacterium JGI 0000039-D08 RepID=UPI0003A14E9B
13_1_20cm_4_scaffold_65_30
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(23411..25894)
DNA (2484bp) protein (828aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8X9_GEMAT
hypothetical membrane protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
Displaying items 1-30 of 57 in total

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