ggKbase home page

13_1_20cm_4_scaffold_1238

Search features with annotation key words

Displaying 12 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_1238_1

Not on your lists

comp(3..257)
DNA (255bp) protein (85aa)
Oligopeptide transport ATP-binding protein appF n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L2R2_THERP
Marine sediment metagenome DNA, contig: S01H1_L08511 {ECO:0000313|EMBL:GAF92414.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
oligopeptide transport ATP-binding protein OppF
13_1_20cm_4_scaffold_1238_2
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

comp(268..1158)
DNA (891bp) protein (297aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI00036272E0
Putative oligopeptide transport atp-binding abc transporter protein {ECO:0000313|EMBL:ACM05447.1}; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;
putative oligopeptide ABC transporter ATP-binding protein
13_1_20cm_4_scaffold_1238_3
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

comp(1221..2078)
DNA (858bp) protein (286aa)
Maltose ABC transporter, permease n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L2Q8_THERP
Maltose ABC transporter, permease {ECO:0000313|EMBL:ACM05736.1}; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (
maltose ABC transporter permease
13_1_20cm_4_scaffold_1238_4
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

comp(2086..3090)
DNA (1005bp) protein (335aa)
Oligopeptide ABC transporter, permease protein n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L2Q9_THERP rbh
Oligopeptide ABC transporter, permease protein {ECO:0000313|EMBL:ACM04698.1}; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicro
oligopeptide ABC transporter permease
13_1_20cm_4_scaffold_1238_5
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

comp(3121..4905)
DNA (1785bp) protein (595aa)
Bacterial extracellular solute-binding proteins, family 5 n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L2R0_THERP rbh
Bacterial extracellular solute-binding proteins, family 5 {ECO:0000313|EMBL:ACM05548.1}; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="
extracellular solute-binding protein
13_1_20cm_4_scaffold_1238_6
uncultured crenarchaeote, Crenarchaeota, Archaea

Not on your lists

4967..5353
DNA (387bp) protein (129aa)
Translation initiation inhibitor n=2 Tax=Archaea RepID=E6N850_9ARCH
Translation initiation inhibitor {ECO:0000313|EMBL:BAL57794.1}; TaxID=29281 species="Archaea; Crenarchaeota; environmental samples.;" source="uncultured crenarchaeote.;"
translation initiation inhibitor
13_1_20cm_4_scaffold_1238_7
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5369..5854)
DNA (486bp) protein (162aa)
glyoxalase/bleomycin resistance protein/dioxygenase (EC:1.13.11.2)
glyoxalase/bleomycin resistance protein/dioxygenase Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
Glyoxalase/bleomycin resistance protein/dioxygenase id=1823926 bin=GWD2_Deltaproteobacteria_55_8 species=Burkholderia sp. genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
13_1_20cm_4_scaffold_1238_8
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5916..6743)
DNA (828bp) protein (276aa)
Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase-like protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XI34_NAKMY
Uncharacterized protein {ECO:0000313|EMBL:ETX09047.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase-like protein
13_1_20cm_4_scaffold_1238_9
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6748..7098)
DNA (351bp) protein (117aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00036D1353
Uncharacterized protein {ECO:0000313|EMBL:ETX06503.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
hypothetical protein
13_1_20cm_4_scaffold_1238_10
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(7119..8411)
DNA (1293bp) protein (431aa)
Arabinose efflux permease family protein n=1 Tax=Caulobacter crescentus OR37 RepID=R0D4W7_CAUCE
Folate transporter {ECO:0000313|EMBL:AIE87708.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisol
folate transporter
13_1_20cm_4_scaffold_1238_11
unknown

Not on your lists

comp(8411..8884)
DNA (474bp) protein (158aa)

This feature has no annotations

13_1_20cm_4_scaffold_1238_12
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(8909..9082)
DNA (174bp) protein (58aa)
Cadidate carboxyvinyl-carboxyphosphonate phosphorylmutase (Carboxyphosphonoenolpyruvate phosphonomutase) n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y4Y5_RAMTT
prpB; cadidate carboxyvinyl-carboxyphosphonate phosphorylmutase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
prpB; cadidate carboxyvinyl-carboxyphosphonate phosphorylmutase
Displaying 12 items

View Taxonomy