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13_1_20cm_4_scaffold_1329

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_1329_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(1..141)
DNA (141bp) protein (47aa)
tRNA (adenine-N(1)-)-methyltransferase (EC:2.1.1.36); K07442 tRNA (adenine57-N1/adenine58-N1)-methyltransferase [EC:2.1.1.219 2.1.1.220] Tax=GWA2_Rokubacteria_73_35_curated
tRNA (Adenine-N(1)-)-methyltransferase id=4549106 bin=GWA2_Methylomirabilis_73_35 species=Dictyoglomus turgidum genus=Dictyoglomus taxon_order=Dictyoglomales taxon_class=Dictyoglomia phylum=Dictyoglomi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_20cm_4_scaffold_1329_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(138..1361)
DNA (1224bp) protein (408aa)
major facilitator transporter; K08223 MFS transporter, FSR family, fosmidomycin resistance protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
fosmidomycin resistance protein; K08223 MFS transporter, FSR family, fosmidomycin resistance protein id=14625329 bin=bin7_NC10_sister species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10 rbh
major facilitator transporter
13_1_20cm_4_scaffold_1329_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

1390..1806
DNA (417bp) protein (139aa)
Glyoxalase/bleomycin resistance protein/dioxygenase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
putative glyoxalase; K07104 id=14625328 bin=bin7_NC10_sister species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin7_NC10_sister organism_group=NC10
extradiol ring-cleavage dioxygenase
13_1_20cm_4_scaffold_1329_4
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(1984..3156)
DNA (1173bp) protein (391aa)
gcdH; glutaryl-CoA dehydrogenase; K00252 glutaryl-CoA dehydrogenase [EC:1.3.99.7] Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
gcdH; glutaryl-CoA dehydrogenase; K00252 glutaryl-CoA dehydrogenase [EC:1.3.99.7] id=14428654 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=bin3_NC10 organism_group=NC10 rbh
acyl-CoA dehydrogenase
13_1_20cm_4_scaffold_1329_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(3167..3826)
DNA (660bp) protein (220aa)
hypothetical protein; K09125 hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Hypothetical conserved protein id=4453409 bin=GWA2_Methylomirabilis_73_35 species=uncultured Acidobacteria bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_20cm_4_scaffold_1329_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(3840..5246)
DNA (1407bp) protein (469aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=14625321 bin=bin7_NC10_sister species=Smithella sp. ME-1 genus=Smithella taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_20cm_4_scaffold_1329_7
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(5274..6290)
DNA (1017bp) protein (339aa)
PDZ/DHR/GLGF domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PDZ/DHR/GLGF domain protein id=3234512 bin=GWA2_Methylomirabilis_73_35 species=Methylobacterium sp. genus=Methylobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
PDZ/DHR/GLGF
13_1_20cm_4_scaffold_1329_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(6325..7323)
DNA (999bp) protein (333aa)
dTDP-glucose 4,6-dehydratase; K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] Tax=GWA2_Rokubacteria_73_35_curated
dTDP-glucose 4,6-dehydratase id=3234516 bin=GWA2_Methylomirabilis_73_35 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
dTDP-glucose 4,6-dehydratase
13_1_20cm_4_scaffold_1329_9
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(7386..7922)
DNA (537bp) protein (179aa)
putative dTDP-4-dehydrorhamnose 3,5-epimerase; K01790 dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] Tax=GWA2_Rokubacteria_73_35_curated
Putative dTDP-4-dehydrorhamnose 3,5-epimerase id=3234518 bin=GWA2_Methylomirabilis_73_35 species=ACD43 genus=ACD43 taxon_order=ACD43 taxon_class=ACD43 phylum=OD1 tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative dTDP-4-dehydrorhamnose 3,5-epimerase
13_1_20cm_4_scaffold_1329_10
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(7953..8870)
DNA (918bp) protein (306aa)
glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24)
rmlA; glucose-1-phosphate thymidylyltransferase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Glucose-1-phosphate thymidylyltransferase id=3234520 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Displaying 10 items

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