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13_1_20cm_4_scaffold_1550

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Displaying items 1-30 of 31 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_1550_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(1..1011)
DNA (1011bp) protein (337aa)
peptidase M16 domain protein; K07263 zinc protease [EC:3.4.24.-] Tax=GWA2_Rokubacteria_73_35_curated
Peptidase M16 domain protein id=2598289 bin=GWA2_Methylomirabilis_73_35 species=Desulfurivibrio alkaliphilus genus=Desulfurivibrio taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
peptidase M16 domain-containing protein
13_1_20cm_4_scaffold_1550_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

1214..1927
DNA (714bp) protein (238aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=2598292 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_20cm_4_scaffold_1550_3
unknown

Not on your lists

1897..2031
DNA (135bp) protein (45aa)

This feature has no annotations

13_1_20cm_4_scaffold_1550_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

2137..3468
DNA (1332bp) protein (444aa)
peptidase S46 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Peptidase S46 id=2598295 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
periplasmic serine proteinase
13_1_20cm_4_scaffold_1550_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(3600..3947)
DNA (348bp) protein (116aa)
histidine triad (HIT) protein; K02503 Hit-like protein involved in cell-cycle regulation Tax=GWA2_Rokubacteria_73_35_curated
Histidine triad (HIT) protein id=4334202 bin=GWA2_Methylomirabilis_73_35 species=Thiothrix nivea genus=Thiothrix taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
histidine triad (HIT) protein
13_1_20cm_4_scaffold_1550_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(4217..4843)
DNA (627bp) protein (209aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7J9_GEMAT
hypothetical membrane protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical membrane protein
13_1_20cm_4_scaffold_1550_7
unknown

Not on your lists

comp(5177..5614)
DNA (438bp) protein (146aa)

This feature has no annotations

13_1_20cm_4_scaffold_1550_8
unknown

Not on your lists

5754..5957
DNA (204bp) protein (68aa)

This feature has no annotations

13_1_20cm_4_scaffold_1550_trna_1
unknown

Not on your lists

comp(6165..6237)
DNA (73bp)
transferRNA
13_1_20cm_4_scaffold_1550_9
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(6268..6474)
DNA (207bp) protein (69aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Uncharacterized protein id=2586442 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
13_1_20cm_4_scaffold_1550_10
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(6471..6923)
DNA (453bp) protein (151aa)
hypothetical protein Tax=GWC2_Rokubacteria_70_16_curated
Uncharacterized protein id=2586442 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
13_1_20cm_4_scaffold_1550_11
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(6920..8227)
DNA (1308bp) protein (436aa)
hypothetical protein; K07403 membrane-bound serine protease (ClpP class) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative protease/transporter id=5010016 bin=GWA2_Methylomirabilis_73_35 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
membrane-bound serine protease
13_1_20cm_4_scaffold_1550_12
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(8224..9159)
DNA (936bp) protein (312aa)
agmatinase; K01480 agmatinase [EC:3.5.3.11] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
agmatinase; K01480 agmatinase [EC:3.5.3.11] id=14627707 bin=bin7_NC10_sister species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
agmatinase
13_1_20cm_4_scaffold_1550_13
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(9160..10377)
DNA (1218bp) protein (406aa)
SufS subfamily cysteine desulfurase (EC:4.4.1.16); K11717 cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
SufS subfamily cysteine desulfurase (EC:4.4.1.16)
Cysteine desulfurase id=5010015 bin=GWA2_Methylomirabilis_73_35 species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_20cm_4_scaffold_1550_14
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(10374..10766)
DNA (393bp) protein (131aa)
SUF system FeS assembly protein; K04488 nitrogen fixation protein NifU and related proteins Tax=GWA2_Rokubacteria_73_35_curated
SUF system FeS assembly protein id=5010014 bin=GWA2_Methylomirabilis_73_35 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
NifU family SUF system FeS assembly protein
13_1_20cm_4_scaffold_1550_15
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(10792..11823)
DNA (1032bp) protein (344aa)
molybdopterin binding domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Molybdopterin binding domain-containing protein id=5010013 bin=GWA2_Methylomirabilis_73_35 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
molybdopterin binding domain-containing protein
13_1_20cm_4_scaffold_1550_16
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(11820..12869)
DNA (1050bp) protein (350aa)
hypothetical protein; K07402 xanthine dehydrogenase accessory factor Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative uncharacterized protein id=5010012 bin=GWA2_Methylomirabilis_73_35 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_20cm_4_scaffold_1550_17
unknown

Not on your lists

comp(12923..13204)
DNA (282bp) protein (94aa)

This feature has no annotations

13_1_20cm_4_scaffold_1550_18
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(13377..14126)
DNA (750bp) protein (250aa)
VWA domain containing CoxE-like protein; K07161 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
VWA domain containing CoxE-like protein id=5010011 bin=GWA2_Methylomirabilis_73_35 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
VWA containing CoxE family protein
13_1_20cm_4_scaffold_1550_19
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(14105..14350)
DNA (246bp) protein (82aa)
VWA domain containing CoxE-like protein; K07161 Tax=GWA2_Rokubacteria_73_35_curated
VWA domain containing CoxE-like protein id=5010011 bin=GWA2_Methylomirabilis_73_35 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_20cm_4_scaffold_1550_20
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(14380..15273)
DNA (894bp) protein (298aa)
ATPase AAA Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ATPase associated with various cellular activities AAA_5 id=5010010 bin=GWA2_Methylomirabilis_73_35 species=Haliscomenobacter hydrossis genus=Haliscomenobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ATPase associated with various cellular activities AAA_5
13_1_20cm_4_scaffold_1550_21
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(15280..15840)
DNA (561bp) protein (187aa)
4-diphosphocytidyl-2C-methyl-D-erythritol synthase; K07141 molybdenum cofactor cytidylyltransferase [EC:2.7.7.76] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Molybdenum cofactor cytidylyltransferase id=5010009 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
MobA-like protein
13_1_20cm_4_scaffold_1550_22
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(15852..16655)
DNA (804bp) protein (268aa)
family 2 glycosyl transferase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Glycosyltransferase id=2319272 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
family 2 glycosyl transferase
13_1_20cm_4_scaffold_1550_23
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(16652..18295)
DNA (1644bp) protein (548aa)
Glycosyl transferase, family 39 n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HQC0_9FIRM
arnT; undecaprenyl phosphate--lipid A 4-amino-4-deoxy-L-arabinose transferase Tax=GWA2_Rokubacteria_73_35_curated
undecaprenyl phosphate-alpha-L-Ara4N transferase
13_1_20cm_4_scaffold_1550_24
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

18357..20261
DNA (1905bp) protein (635aa)
asparagine synthase Tax=GWA2_Rokubacteria_70_23_curated
Asparagine synthetase id=4814774 bin=GWC2_Methylomirabilis_70_16 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
asparagine synthase
13_1_20cm_4_scaffold_1550_25
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

20304..21128
DNA (825bp) protein (275aa)
amidohydrolase 2; K07046 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
amidohydrolase 2 id=2319316 bin=GWA2_Methylomirabilis_73_35 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
amidohydrolase 2
13_1_20cm_4_scaffold_1550_26
unknown

Not on your lists

comp(21364..21807)
DNA (444bp) protein (148aa)

This feature has no annotations

13_1_20cm_4_scaffold_1550_27
unknown

Not on your lists

comp(21856..22164)
DNA (309bp) protein (103aa)

This feature has no annotations

13_1_20cm_4_scaffold_1550_28
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

22353..23291
DNA (939bp) protein (313aa)
NAD-dependent epimerase/dehydratase; K00091 dihydroflavonol-4-reductase [EC:1.1.1.219] Tax=GWC2_Rokubacteria_70_16_curated
Hopanoid-associated sugar epimerase id=4350132 bin=GWC2_Methylomirabilis_70_16 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hopanoid-associated sugar epimerase
13_1_20cm_4_scaffold_1550_29
Tolypothrix bouteillei, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

23300..24655
DNA (1356bp) protein (452aa)
Cytochrome P450 n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DL33_SINAD
Uncharacterized protein {ECO:0000313|EMBL:KIE09319.1}; TaxID=1479485 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix bouteillei VB521301.;"
cytochrome P450
Displaying items 1-30 of 31 in total

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