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13_1_20cm_4_scaffold_1693

Search features with annotation key words

Displaying items 1-30 of 40 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_1693_1
RifOxyA12_full_Lentisphaerae_48_11_curated, Lentisphaerae, Bacteria

Not on your lists

89..967
DNA (879bp) protein (293aa)
hypothetical protein Tax=RifOxyA12_full_Lentisphaerae_48_11_curated
Putative uncharacterized protein id=1705625 bin=GWB2_Elusimicrobium_63_22 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Elusimicrobium_63_22 organism_group=Elusimicrobia organism_desc=Good -
hypothetical protein
13_1_20cm_4_scaffold_1693_2
unknown

Not on your lists

979..1368
DNA (390bp) protein (130aa)

This feature has no annotations

13_1_20cm_4_scaffold_1693_3
Gymnopus luxurians, Gymnopus, Agaricales, Agaricomycetidae, Basidiomycota, Fungi

Not on your lists

1467..2540
DNA (1074bp) protein (358aa)
Unplaced genomic scaffold GYMLUscaffold_48, whole genome shotgun sequence {ECO:0000313|EMBL:KIK56640.1}; TaxID=944289 species="Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes
13_1_20cm_4_scaffold_1693_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(2522..3763)
DNA (1242bp) protein (414aa)
crotonyl-CoA reductase; K14446 crotonyl-CoA carboxylase/reductase [EC:1.3.1.85] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Crotonyl-CoA reductase id=3646800 bin=GWC2_Methylomirabilis_70_16 species=Caenispirillum salinarum genus=Caenispirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
crotonyl-CoA reductase
13_1_20cm_4_scaffold_1693_5
unknown

Not on your lists

comp(3760..3876)
DNA (117bp) protein (39aa)

This feature has no annotations

13_1_20cm_4_scaffold_1693_6
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(3873..4889)
DNA (1017bp) protein (339aa)
luciferase family protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Luciferase family protein id=3646803 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
luciferase family protein
13_1_20cm_4_scaffold_1693_7
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(4886..5998)
DNA (1113bp) protein (371aa)
2-nitropropane dioxygenase; K00459 nitronate monooxygenase [EC:1.13.12.16] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
2-nitropropane dioxygenase NPD n=1 Tax=Planococcus antarcticus DSM 14505 RepID=I4X689_9BACL
2-nitropropane dioxygenase NPD
13_1_20cm_4_scaffold_1693_8
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(5995..7032)
DNA (1038bp) protein (346aa)
long-chain-fatty-acid--CoA ligase (EC:6.2.1.3); K00666 fatty-acyl-CoA synthase [EC:6.2.1.-] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
AMP-forming acyl-CoA synthetase; K00666 fatty-acyl-CoA synthase [EC:6.2.1.-] id=14627972 bin=bin7_NC10_sister species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
fatty-acid--CoA ligase
13_1_20cm_4_scaffold_1693_9
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(7497..8336)
DNA (840bp) protein (280aa)
id=3202777 Tax=GWC2_Rokubacteria_70_16_curated
id=3202777 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_20cm_4_scaffold_1693_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(8339..9451)
DNA (1113bp) protein (371aa)
CAIB/BAIF family protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
L-carnitine dehydratase/bile acid-inducible protein F id=4426882 bin=GWC2_Methylomirabilis_70_16 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
coA-transferase III family protein
13_1_20cm_4_scaffold_1693_11
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(9536..9958)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QT42_METTR
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
hypothetical protein
13_1_20cm_4_scaffold_1693_12
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(9949..10257)
DNA (309bp) protein (103aa)
Assimilatory nitrite reductase (NAD(P)H) small subunit {ECO:0000313|EMBL:ABQ91575.1}; EC=1.7.1.4 {ECO:0000313|EMBL:ABQ91575.1};; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexal
Assimilatory nitrite reductase (NAD(P)H) small subunit n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UY72_ROSS1
Rieske (2Fe-2S) domain-containing protein
13_1_20cm_4_scaffold_1693_13
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(10286..10969)
DNA (684bp) protein (228aa)
TENA/THI-4 family protein n=1 Tax=Aneurinibacillus aneurinilyticus ATCC 12856 RepID=U1Y0Z8_ANEAE
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
hypothetical protein
13_1_20cm_4_scaffold_1693_14
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(11021..11515)
DNA (495bp) protein (165aa)
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
MOSC domain containing protein id=3776762 bin=GWA2_Methylomirabilis_73_35 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_20cm_4_scaffold_1693_15
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11548..12642
DNA (1095bp) protein (365aa)
hypothetical protein; K00549 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IJR7_9SPHN
methionine synthase
13_1_20cm_4_scaffold_1693_16
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

12642..13373
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IPJ9_9BRAD
bluB; cob(II)yrinic acid a,c-diamide reductase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein
13_1_20cm_4_scaffold_1693_17
unknown

Not on your lists

comp(13447..13764)
DNA (318bp) protein (106aa)

This feature has no annotations

13_1_20cm_4_scaffold_1693_18
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13725..14609)
DNA (885bp) protein (295aa)
Uncharacterized protein n=2 Tax=Haloarcula hispanica RepID=G0HYA7_HALHT
Uncharacterized protein {ECO:0000313|EMBL:ETX03393.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
hypothetical protein
13_1_20cm_4_scaffold_1693_19
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(14785..15006)
DNA (222bp) protein (74aa)
nitroreductase Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
nitroreductase id=14426274 bin=bin1_lowGC species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=bin1_lowGC organism_group=Unknown_CP
putative F420-dependent enzyme
13_1_20cm_4_scaffold_1693_20
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(15074..15907)
DNA (834bp) protein (278aa)
oxidoreductase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative N5,N10-methylenetetrahydromethanopterin reductase-related protein id=4935480 bin=GWC2_Methylomirabilis_70_24 species=marine gamma proteobacterium HTCC2143 genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
oxidoreductase
13_1_20cm_4_scaffold_1693_21
Aneurinibacillus migulanus, Aneurinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15926..16699)
DNA (774bp) protein (258aa)
Glyoxalase family protein n=1 Tax=Aneurinibacillus aneurinilyticus ATCC 12856 RepID=U1WZA5_ANEAE
Strain NCTC 7096 contig_18, whole genome shotgun sequence {ECO:0000313|EMBL:KIV58761.1}; TaxID=47500 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Aneurinibacillus group; Aneur
virulence protein
13_1_20cm_4_scaffold_1693_22
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(16696..17634)
DNA (939bp) protein (313aa)
formamidase (EC:3.5.1.49) Tax=GWC2_Rokubacteria_70_16_curated
Formamidase (EC:3.5.1.49)
Formamidase id=4766431 bin=GWC2_Methylomirabilis_70_16 species=Bacillus selenitireducens genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_20cm_4_scaffold_1693_23
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(17636..18103)
DNA (468bp) protein (156aa)
DoxX family protein; K15977 putative oxidoreductase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein; K15977 putative oxidoreductase id=14431357 bin=bin3_NC10 species=Rhizobium sp. genus=Rhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
13_1_20cm_4_scaffold_1693_24
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18110..18952)
DNA (843bp) protein (281aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI00031FBBB7
Uncharacterized protein {ECO:0000313|EMBL:ACZ87560.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum
hypothetical protein
13_1_20cm_4_scaffold_1693_25
Amorphus coralli, Amorphus, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18956..19306)
DNA (351bp) protein (117aa)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI000381661B
13_1_20cm_4_scaffold_1693_26
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19306..19671)
DNA (366bp) protein (122aa)
cupin 2 barrel domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
Putative uncharacterized protein id=2193858 bin=GWB2_Deltaproteobacteria_65_81 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
cupin
13_1_20cm_4_scaffold_1693_27
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(19693..20679)
DNA (987bp) protein (329aa)
uroporphyrinogen decarboxylase; K01599 uroporphyrinogen decarboxylase [EC:4.1.1.37] Tax=GWA2_Rokubacteria_70_23_curated
Uroporphyrinogen decarboxylase id=4355655 bin=GWF2_Methylomirabilis_70_14 species=Cupriavidus basilensis genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
uroporphyrinogen decarboxylase
13_1_20cm_4_scaffold_1693_28
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

20770..21480
DNA (711bp) protein (237aa)
pdhR; GntR family transcriptional regulator; K05799 GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_cura
transcriptional regulator id=14626765 bin=bin7_NC10_sister species=Desulfosporosinus acidiphilus genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
GntR family transcriptional regulator
13_1_20cm_4_scaffold_1693_29
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

21494..22732
DNA (1239bp) protein (413aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=14626658 bin=bin7_NC10_sister species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_20cm_4_scaffold_1693_30
Burkholderia grimmiae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22925..24319
DNA (1395bp) protein (465aa)
Dihydroxy-acid dehydratase {ECO:0000313|EMBL:KDR34627.1}; EC=4.2.1.9 {ECO:0000313|EMBL:KDR34627.1};; TaxID=1071679 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiac
putative dihydroxy-acid dehydratase (EC:4.2.1.9)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI0003810B20
Displaying items 1-30 of 40 in total

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