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13_1_20cm_4_scaffold_377

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Displaying 28 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_377_1
unknown

Not on your lists

405..713
DNA (309bp) protein (103aa)

This feature has no annotations

13_1_20cm_4_scaffold_377_2
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(710..2974)
DNA (2265bp) protein (755aa)
aminoglycoside phosphotransferase; K06979 Tax=GWC2_Rokubacteria_70_16_curated
Aminoglycoside phosphotransferase id=4923991 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Ralstonia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
fadE36; aminoglycoside phosphotransferase
13_1_20cm_4_scaffold_377_3
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(2971..3849)
DNA (879bp) protein (293aa)
dapF; diaminopimelate epimerase (EC:5.1.1.7); K01778 diaminopimelate epimerase [EC:5.1.1.7] Tax=GWC2_Rokubacteria_70_16_curated
Diaminopimelate epimerase (EC:5.1.1.7)
Diaminopimelate epimerase id=3024534 bin=GWC2_Methylomirabilis_70_16 species=Persephonella marina genus=Persephonella taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_20cm_4_scaffold_377_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(3846..4970)
DNA (1125bp) protein (375aa)
Oxidoreductase domain protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Oxidoreductase domain protein id=3024538 bin=GWC2_Methylomirabilis_70_16 species=Tepidanaerobacter acetatoxydans genus=Tepidanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
oxidoreductase domain-containing protein
13_1_20cm_4_scaffold_377_5
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(4983..6113)
DNA (1131bp) protein (377aa)
citrate synthase (EC:2.3.3.1); K01647 citrate synthase [EC:2.3.3.1] Tax=CSP1_6_Rokubacteria
citrate synthase (EC:2.3.3.1); K01647 citrate synthase [EC:2.3.3.1] id=14625051 bin=bin7_NC10_sister species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
2-methylcitrate synthase/citrate synthase II (EC:2.3.3.1)
13_1_20cm_4_scaffold_377_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

6150..6998
DNA (849bp) protein (283aa)
UbiE/COQ5 family methlytransferase Tax=GWA2_Rokubacteria_73_35_curated
Methylase involved in ubiquinone/menaquinone biosynthesis id=4379994 bin=GWA2_Methylomirabilis_73_35 species=Burkholderiales bacterium JOSHI_001 genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
UbiE/COQ5 family methlytransferase
13_1_20cm_4_scaffold_377_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(6982..8607)
DNA (1626bp) protein (542aa)
AsmA family protein; K07289 AsmA protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
AsmA family protein id=4379996 bin=GWA2_Methylomirabilis_73_35 species=mine drainage metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
AsmA family protein
13_1_20cm_4_scaffold_377_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(8636..9553)
DNA (918bp) protein (306aa)
import inner membrane translocase subunit Tim44 Tax=GWA2_Rokubacteria_73_35_curated
Import inner membrane translocase subunit Tim44 id=4957118 bin=GWA2_Methylomirabilis_73_35 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
import inner membrane translocase subunit Tim44
13_1_20cm_4_scaffold_377_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(9724..10692)
DNA (969bp) protein (323aa)
qor2; NADPH:quinone reductase (EC:1.6.5.5); K00344 NADPH2:quinone reductase [EC:1.6.5.5] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Quinone oxidoreductase (NADPH:quinone reductase) id=4380010 bin=GWA2_Methylomirabilis_73_35 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Alcohol dehydrogenase zinc-binding domain protein
13_1_20cm_4_scaffold_377_10
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(10735..11091)
DNA (357bp) protein (119aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative uncharacterized protein id=4380018 bin=GWA2_Methylomirabilis_73_35 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_20cm_4_scaffold_377_11
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(11097..11624)
DNA (528bp) protein (176aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative uncharacterized protein id=4380018 bin=GWA2_Methylomirabilis_73_35 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_20cm_4_scaffold_377_12
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(11642..12070)
DNA (429bp) protein (143aa)
id=14625060 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
id=4954793 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
13_1_20cm_4_scaffold_377_13
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(12067..12765)
DNA (699bp) protein (233aa)
processing peptidase (EC:3.4.24.64)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative Peptidase M16 domain protein, involved in ppq synthesis (PpqG) id=3708843 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_20cm_4_scaffold_377_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(12744..13223)
DNA (480bp) protein (160aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative Peptidase M16 domain protein, involved in ppq synthesis (PpqG) id=3708843 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_20cm_4_scaffold_377_15
R_Elusimicrobia_60_11, Elusimicrobia, Bacteria

Not on your lists

comp(13220..13618)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLS6_9BACT
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_60_11_curated
hypothetical protein
13_1_20cm_4_scaffold_377_16
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(13838..14962)
DNA (1125bp) protein (375aa)
ABC transporter permease Tax=GWA2_Rokubacteria_73_35_curated
Putative ABC transporter (Permease proteine) id=3708844 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter permease
13_1_20cm_4_scaffold_377_17
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(15178..16206)
DNA (1029bp) protein (343aa)
ABC transporter ATP-binding protein (EC:3.6.3.-) Tax=GWA2_Rokubacteria_73_35_curated
ABC transporter ATP-binding protein (EC:3.6.3.-)
Putative ABC transporter (ATP-binding protein) id=3708845 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_20cm_4_scaffold_377_18
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16146..16628)
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TFX4_9BRAD
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
hypothetical protein
13_1_20cm_4_scaffold_377_19
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(16676..17665)
DNA (990bp) protein (330aa)
secretion protein HlyD; K01993 HlyD family secretion protein Tax=CSP1_6_Rokubacteria
secretion protein HlyD; K01993 HlyD family secretion protein id=14625064 bin=bin7_NC10_sister species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10 rbh
Secretion protein HlyD
13_1_20cm_4_scaffold_377_20
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(17662..18981)
DNA (1320bp) protein (440aa)
Zn-dependent protease Tax=GWA2_Rokubacteria_73_35_curated
Putative Zn-dependent protease, involved in pqq synthesis (PpqF) id=4954832 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Zn-dependent protease
13_1_20cm_4_scaffold_377_21
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

19038..20090
DNA (1053bp) protein (351aa)
serine protease Do Tax=GWA2_Rokubacteria_73_35_curated
Serine protease Do id=3708848 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Dictyoglomus taxon_order=Dictyoglomales taxon_class=Dictyoglomia phylum=Dictyoglomi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
serine protease Do
13_1_20cm_4_scaffold_377_22
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(20257..20724)
DNA (468bp) protein (156aa)
putative uracil-DNA glycosylase (EC:3.2.2.-) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
putative uracil-DNA glycosylase (EC:3.2.2.-)
Uracil-DNA glycosylase id=4954851 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
13_1_20cm_4_scaffold_377_23
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

20979..21899
DNA (921bp) protein (307aa)
asrgl; L-asparaginase (Asparaginase-like protein 1) (EC:3.5.1.1) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
asrgl; L-asparaginase (Asparaginase-like protein 1) (EC:3.5.1.1)
Peptidase T2 asparaginase 2 id=3500033 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_20cm_4_scaffold_377_24
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

21965..23176
DNA (1212bp) protein (404aa)
threonine dehydratase; K01754 threonine dehydratase [EC:4.3.1.19] Tax=GWC2_Rokubacteria_70_16_curated
L-threonine ammonia-lyase (EC:4.3.1.19)
Threonine dehydratase id=3500034 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_20cm_4_scaffold_377_25
unknown

Not on your lists

comp(23192..23422)
DNA (231bp) protein (77aa)

This feature has no annotations

13_1_20cm_4_scaffold_377_26
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(23499..24137)
DNA (639bp) protein (213aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase (EC:2.3.1.51); K00655 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
1-acyl-sn-glycerol-3-phosphate acyltransferase (EC:2.3.1.51)
1-acyl-sn-glycerol-3-phosphate acyltransferase id=3708850 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_20cm_4_scaffold_377_27
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(24211..24615)
DNA (405bp) protein (135aa)
TraR/DksA family transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Transcriptional regulator, TraR/DksA family id=3708851 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
TraR/DksA family transcriptional regulator
13_1_20cm_4_scaffold_377_28
CG_Alphaprot_01, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24896..26479)
DNA (1584bp) protein (528aa)
General substrate transporter n=1 Tax=Pseudomonas sp. (strain M1) RepID=L1HPS5_PSEUO
major facilitator transporter Tax=CG_Alphaprot_01
major facilitator transporter
Displaying 28 items

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