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13_1_20cm_4_scaffold_437

Search features with annotation key words

Displaying items 1-30 of 63 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_437_1
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

1..522
DNA (522bp) protein (174aa)
Nucleotidyl transferase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative Nucleotidyl transferase id=4590844 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Nucleotidyl transferase
13_1_20cm_4_scaffold_437_2
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

564..947
DNA (384bp) protein (128aa)
Sensory box histidine kinase/response regulator n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CPS3_MYXFH
Sensory box histidine kinase/response regulator {ECO:0000313|EMBL:AEI62946.1}; TaxID=483219 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxoc
sensory box histidine kinase/response regulator
13_1_20cm_4_scaffold_437_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

993..1775
DNA (783bp) protein (261aa)
short-chain dehydrogenase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Short-chain dehydrogenase/reductase SDR id=4472514 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
short-chain type dehydrogenase/reductase
13_1_20cm_4_scaffold_437_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

1817..2770
DNA (954bp) protein (318aa)
3'-5' exonuclease; K03684 ribonuclease D [EC:3.1.13.5] Tax=GWA2_Rokubacteria_73_35_curated
3'-5' exonuclease id=4472621 bin=GWA2_Methylomirabilis_73_35 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
3'-5' exonuclease
13_1_20cm_4_scaffold_437_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

2784..3230
DNA (447bp) protein (149aa)
CoA-binding domain-containing protein; K06929 Tax=GWA2_Rokubacteria_73_35_curated
CoA-binding domain protein id=4472625 bin=GWA2_Methylomirabilis_73_35 species=Marinithermus hydrothermalis genus=Marinithermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
CoA-binding domain-containing protein
13_1_20cm_4_scaffold_437_6
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

3231..4910
DNA (1680bp) protein (560aa)
ABC transporter Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
ABC transporter related protein id=4472628 bin=GWA2_Methylomirabilis_73_35 species=Haliangium ochraceum genus=Haliangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
ABC transporter
13_1_20cm_4_scaffold_437_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(4888..5541)
DNA (654bp) protein (218aa)
Spermidine synthase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Spermidine synthase id=4472637 bin=GWA2_Methylomirabilis_73_35 species=Gallaecimonas xiamenensis genus=Gallaecimonas taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_20cm_4_scaffold_437_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(5798..6565)
DNA (768bp) protein (256aa)
3-hydroxyacyl-CoA dehydrogenase type II (EC:1.1.1.35)
hsd17b10, abad, camr, erab, hadh2, hcd2, hsd10, mhbd, mrpp2, mrx17, mrx31, mrxs10, schad, sdr5c1; hydroxysteroid (17-beta) dehydrogenase 10; K08683 3-hydroxyacyl-CoA dehydrogenase / 3-hydroxy-2-methyl
putative short chain dehydrogenase id=4472638 bin=GWA2_Methylomirabilis_73_35 species=Pseudonocardia sp. P1 genus=Pseudonocardia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_20cm_4_scaffold_437_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

6624..8216
DNA (1593bp) protein (531aa)
radical SAM domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Radical SAM domain protein id=4478783 bin=GWF2_Methylomirabilis_70_14 species=Gloeobacter violaceus genus=Gloeobacter taxon_order=Gloeobacterales taxon_class=Gloeobacteria phylum=Cyanobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
radical SAM domain-containing protein
13_1_20cm_4_scaffold_437_10
unknown

Not on your lists

comp(8220..8420)
DNA (201bp) protein (67aa)

This feature has no annotations

13_1_20cm_4_scaffold_437_11
unknown

Not on your lists

8552..8743
DNA (192bp) protein (64aa)

This feature has no annotations

13_1_20cm_4_scaffold_437_12
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

8827..9081
DNA (255bp) protein (85aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
hypothetical protein id=12554644 bin=CNBR_ACIDO species=Sphingobium sp. YL23 genus=Sphingobium taxon_order=Sphingomonadales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
13_1_20cm_4_scaffold_437_13
Polaromonas sp. CG9_12, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9101..10240)
DNA (1140bp) protein (380aa)
Cardiolipin synthetase {ECO:0000313|EMBL:CDS54800.1}; EC=2.7.8.- {ECO:0000313|EMBL:CDS54800.1};; TaxID=1504672 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; P
Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase n=1 Tax=Xanthomonas perforans 91-118 RepID=F0BX23_9XANT
cls; cardiolipin synthetase
13_1_20cm_4_scaffold_437_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

10394..11077
DNA (684bp) protein (228aa)
peptidase, M50 family protein (EC:3.4.24.-) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Lead, cadmium, zinc and mercury transporting ATPase; Copper-translocating P-type ATPase (EC:3.6.3.4 3.6.3.3)
protease id=14631826 bin=bin9_gal15 species=Dehalococcoides mccartyi genus=Dehalococcoides taxon_order=Dehalococcoidales taxon_class=Dehalococcoidia phylum=Chloroflexi tax=bin9_gal15 organism_group=GAL15
13_1_20cm_4_scaffold_437_15
Candidatus Jettenia caeni, Candidatus Jettenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(11235..13412)
DNA (2178bp) protein (726aa)
Putative amylo-alpha-1,6-glucosidase n=1 Tax=planctomycete KSU-1 RepID=I3IPX7_9PLAN rbh
Putative amylo-alpha-1,6-glucosidase {ECO:0000313|EMBL:GAB63772.1}; TaxID=247490 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae.;" source="planctomycete KSU-1.;
amylo-alpha-16-glucosidase
13_1_20cm_4_scaffold_437_16
CSP1_5_NC10, NC10, Bacteria

Not on your lists

13451..14494
DNA (1044bp) protein (348aa)
group 1 glycosyl transferase Tax=CSP1_5_NC10
group 1 glycosyl transferase id=14430920 bin=bin3_NC10 species=unknown genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
putative glycosyltransferase
13_1_20cm_4_scaffold_437_17
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14551..15063)
DNA (513bp) protein (171aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003653DBE
peptidoglycan binding domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
plasma membrane H+-transporting two-sector ATPase
13_1_20cm_4_scaffold_437_18
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15143..15616)
DNA (474bp) protein (158aa)
Glucose-fructose oxidoreductase (EC:1.1.99.28)
Glucose-fructose oxidoreductase n=1 Tax=Nostoc sp. PCC 7107 RepID=K9QCH2_9NOSO
putative glucose-fructose oxidoreductase protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
13_1_20cm_4_scaffold_437_19
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15582..16094)
DNA (513bp) protein (171aa)
Glucose--fructose oxidoreductase {ECO:0000313|EMBL:EAU68724.1}; EC=1.1.99.28 {ECO:0000313|EMBL:EAU68724.1};; Glucose-fructose oxidoreductase {ECO:0000313|EMBL:ADO68013.1}; EC=1.1.99.28 {ECO:0000313|EM
glucose-fructose oxidoreductase (EC:1.1.99.28)
Glucose--fructose oxidoreductase n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q09AG6_STIAD
13_1_20cm_4_scaffold_437_20
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

16440..16718
DNA (279bp) protein (93aa)
recombinase A Tax=GWA2_Rokubacteria_70_23_curated
RecA domain protein id=4338380 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_20cm_4_scaffold_437_21
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

16706..18193
DNA (1488bp) protein (496aa)
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
Putative uncharacterized protein id=4472641 bin=GWA2_Methylomirabilis_73_35 species=Acidobacterium capsulatum genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_20cm_4_scaffold_437_22
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

18362..21433
DNA (3072bp) protein (1024aa)
dnaE1; DNA polymerase III, alpha subunit (EC:2.7.7.7); K14162 error-prone DNA polymerase [EC:2.7.7.7] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
DNA-directed DNA polymerase III PolC (EC:2.7.7.7)
DNA-directed DNA polymerase III PolC n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZFG8_TERRK
13_1_20cm_4_scaffold_437_23
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

21488..21883
DNA (396bp) protein (132aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
13_1_20cm_4_scaffold_437_24
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

21847..22149
DNA (303bp) protein (101aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
13_1_20cm_4_scaffold_437_25
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

22195..23124
DNA (930bp) protein (310aa)
ATP dependent DNA ligase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01NN0_SOLUE
ATP dependent DNA ligase {ECO:0000313|EMBL:ABJ88740.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitat
ATP dependent DNA ligase
13_1_20cm_4_scaffold_437_26
unknown

Not on your lists

23145..23357
DNA (213bp) protein (71aa)

This feature has no annotations

13_1_20cm_4_scaffold_437_27
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(23483..24085)
DNA (603bp) protein (201aa)
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
Putative uncharacterized protein id=2811602 bin=GWC2_Methylomirabilis_70_24 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
13_1_20cm_4_scaffold_437_28
unknown

Not on your lists

comp(24082..24258)
DNA (177bp) protein (59aa)

This feature has no annotations

13_1_20cm_4_scaffold_437_29
Treponema paraluiscuniculi, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

24608..24958
DNA (351bp) protein (117aa)
Possible dnaK suppressor n=10 Tax=Treponema RepID=B2S244_TREPS
Probable DnaK suppressor protein {ECO:0000313|EMBL:AEH40052.1}; TaxID=545776 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema paraluiscuniculi (strain C
dksA; putative DnaK suppressor protein
13_1_20cm_4_scaffold_437_30
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24979..25296
DNA (318bp) protein (106aa)
transporter n=1 Tax=Methyloversatilis sp. NVD RepID=UPI000362E8C6
transport-associated protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
lipoprotein
Displaying items 1-30 of 63 in total

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