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13_1_20cm_4_scaffold_605

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Displaying 17 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_605_1
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(3..971)
DNA (969bp) protein (323aa)
pdhB; Pyruvate dehydrogenase E1 component subunit beta (EC:1.2.4.1) Tax=CSP1_6_Rokubacteria
pdhB; Pyruvate dehydrogenase E1 component subunit beta (EC:1.2.4.1) id=14627459 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10 rbh
pdhB; Pyruvate dehydrogenase E1 component subunit beta (EC:1.2.4.1)
13_1_20cm_4_scaffold_605_2
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(975..1841)
DNA (867bp) protein (289aa)
pdhA; Pyruvate dehydrogenase E1 component subunit alpha (EC:1.2.4.1) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
pdhA; Pyruvate dehydrogenase E1 component subunit alpha (EC:1.2.4.1) id=14627460 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
pdhA; Pyruvate dehydrogenase E1 component subunit alpha (EC:1.2.4.1)
13_1_20cm_4_scaffold_605_3
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(1861..2163)
DNA (303bp) protein (101aa)
NADH-ubiquinone oxidoreductase subunit 4L; K00340 NADH-quinone oxidoreductase subunit K [EC:1.6.5.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
NADH-ubiquinone oxidoreductase subunit 4L; K00340 NADH-quinone oxidoreductase subunit K [EC:1.6.5.3] id=14627461 bin=bin7_NC10_sister species=Chloroflexus aggregans genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
NADH dehydrogenase subunit K
13_1_20cm_4_scaffold_605_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(2160..2756)
DNA (597bp) protein (199aa)
NADH-ubiquinone/plastoquinone oxidoreductase chain 6; K00339 NADH-quinone oxidoreductase subunit J [EC:1.6.5.3] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
NADH-ubiquinone/plastoquinone oxidoreductase subunit 6; K00339 NADH-quinone oxidoreductase subunit J [EC:1.6.5.3] id=14627462 bin=bin7_NC10_sister species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=bin7_NC10_sister organism_group=NC10
NADH-ubiquinone/plastoquinone oxidoreductase chain 6
13_1_20cm_4_scaffold_605_5
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(2753..3292)
DNA (540bp) protein (180aa)
4Fe-4S ferredoxin; K00338 NADH-quinone oxidoreductase subunit I [EC:1.6.5.3] Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
4Fe-4S ferredoxin; K00338 NADH-quinone oxidoreductase subunit I [EC:1.6.5.3] id=14627537 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Omnitrophica tax=bin7_NC10_sister organism_group=NC10
NADH-quinone oxidoreductase subunit I
13_1_20cm_4_scaffold_605_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(3289..4377)
DNA (1089bp) protein (363aa)
nuoH_[H]; NADH-ubiquinone oxidoreductase chain H (EC:1.6.5.3) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
nuoH; NADH-quinone oxidoreductase chain H (EC:1.6.99.5); K00337 NADH-quinone oxidoreductase subunit H [EC:1.6.5.3] id=14627536 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Omnitrophica tax=bin7_NC10_sister organism_group=NC10
nuoH_[H]; NADH-ubiquinone oxidoreductase chain H (EC:1.6.5.3)
13_1_20cm_4_scaffold_605_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(4374..5945)
DNA (1572bp) protein (524aa)
Molybdopterin oxidoreductase Fe4S4 region Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Molybdopterin oxidoreductase Fe4S4 region id=14627535 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Omnitrophica tax=bin7_NC10_sister organism_group=NC10
Molybdopterin oxidoreductase Fe4S4 region
13_1_20cm_4_scaffold_605_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(6058..7278)
DNA (1221bp) protein (407aa)
NADH-quinone oxidoreductase subunit F (EC:1.6.99.5); K00335 NADH-quinone oxidoreductase subunit F [EC:1.6.5.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
NADH-quinone oxidoreductase subunit F (EC:1.6.99.5)
NADH dehydrogenase I subunit F id=3990315 bin=GWC2_Methylomirabilis_70_16 species=uncultured prokaryote genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 rbh
13_1_20cm_4_scaffold_605_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(7275..7757)
DNA (483bp) protein (161aa)
NADH-quinone oxidoreductase subunit E; K00334 NADH-quinone oxidoreductase subunit E [EC:1.6.5.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
NADH-quinone oxidoreductase subunit E; K00334 NADH-quinone oxidoreductase subunit E [EC:1.6.5.3] id=14627533 bin=bin7_NC10_sister species=Dyadobacter fermentans genus=Dyadobacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=bin7_NC10_sister organism_group=NC10
nuoE; NADH dehydrogenase (ubiquinone) (EC:1.6.5.3)
13_1_20cm_4_scaffold_605_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(7819..9207)
DNA (1389bp) protein (463aa)
nuoD; NADH dehydrogenase I subunit D; K00333 NADH-quinone oxidoreductase subunit D [EC:1.6.5.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
NADH dehydrogenase subunit D (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit D id=2992135 bin=GWF2_Methylomirabilis_70_14 species=uncultured bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_20cm_4_scaffold_605_11
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(9207..9704)
DNA (498bp) protein (166aa)
NADH (or F420H2) dehydrogenase subunit C; K00332 NADH-quinone oxidoreductase subunit C [EC:1.6.5.3] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
NADH-quinone oxidoreductase subunit C id=2992141 bin=GWF2_Methylomirabilis_70_14 species=uncultured prokaryote genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
NADH (or F420H2) dehydrogenase subunit C
13_1_20cm_4_scaffold_605_12
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(9705..10184)
DNA (480bp) protein (160aa)
nuoB1_[H]; NADH-ubiquinone oxidoreductase chain B (EC:1.6.5.3) Tax=GWA2_Rokubacteria_70_23_curated
NADH dehydrogenase subunit B (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit B id=2992145 bin=GWF2_Methylomirabilis_70_14 species=uncultured bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_20cm_4_scaffold_605_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(10154..10504)
DNA (351bp) protein (117aa)
nuoA; NADH-quinone oxidoreductase subunit A (NADH dehydrogenase I, chain A) (NDH-1, chain A) (EC:1.6.99.5 1.6.5.3) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
NADH:ubiquinone oxidoreductase subunit 3 (chain A) (EC:1.6.5.3)
NADH-quinone oxidoreductase subunit A id=4828151 bin=GWC2_Methylomirabilis_70_16 species=uncultured prokaryote genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_20cm_4_scaffold_605_14
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(10651..11577)
DNA (927bp) protein (309aa)
lipA; lipoyl synthase (EC:2.8.1.8); K03644 lipoic acid synthetase [EC:2.8.1.8] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
lipA; lipoyl synthase (EC:2.8.1.8)
Lipoyl synthase id=3340664 bin=GWC2_Methylomirabilis_70_24 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
13_1_20cm_4_scaffold_605_15
unknown

Not on your lists

comp(11702..11980)
DNA (279bp) protein (93aa)

This feature has no annotations

13_1_20cm_4_scaffold_605_16
unknown

Not on your lists

comp(11959..12342)
DNA (384bp) protein (128aa)

This feature has no annotations

13_1_20cm_4_scaffold_605_17
unknown

Not on your lists

comp(12474..12812)
DNA (339bp) protein (113aa)

This feature has no annotations

Displaying 17 items

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