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13_1_20cm_4_scaffold_107

Search features with annotation key words

Displaying items 1-30 of 50 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_107_1
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

3..674
DNA (672bp) protein (224aa)
(2Fe-2S)-binding domain protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CX89_9BACT
(2Fe-2S)-binding domain protein {ECO:0000313|EMBL:EDY20887.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
yagT; Periplasmic aromatic aldehyde oxidoreductase, iron-sulfur subunit YagT
13_1_20cm_4_scaffold_107_2
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

671..1663
DNA (993bp) protein (331aa)
Molybdopterin dehydrogenase FAD-binding n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CX88_9BACT rbh
Molybdopterin dehydrogenase FAD-binding {ECO:0000313|EMBL:EDY20886.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
molybdopterin dehydrogenase
13_1_20cm_4_scaffold_107_3
Cupriavidus sp. HPC(L), Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2821..3666
DNA (846bp) protein (282aa)
xanthine dehydrogenase (EC:1.17.1.4)
Acylaldehyde oxidase n=1 Tax=Cupriavidus sp. HPC(L) RepID=V2JNX6_9BURK
Acylaldehyde oxidase {ECO:0000313|EMBL:ESJ15828.1}; TaxID=1217418 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HPC(L
13_1_20cm_4_scaffold_107_4
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4059..4343
DNA (285bp) protein (95aa)
(2Fe-2S)-binding domain protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6VAI7_9BRAD
(2Fe-2S)-binding domain protein {ECO:0000313|EMBL:EFI50481.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;
putative xanthine dehydrogenase iron-sulfur-binding subunit
13_1_20cm_4_scaffold_107_5
Burkholderia glathei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4340..5344
DNA (1005bp) protein (335aa)
Molybdopterin dehydrogenase FAD-binding protein n=1 Tax=Burkholderia terrae BS001 RepID=I5CC89_9BURK rbh
Periplasmic aromatic aldehyde oxidoreductase, FAD binding subunit YagS {ECO:0000313|EMBL:CDY77713.1}; TaxID=60547 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiace
molybdopterin dehydrogenase FAD-binding
13_1_20cm_4_scaffold_107_6
Granulicella tundricola, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

5359..7614
DNA (2256bp) protein (752aa)
Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein n=1 Tax=Acidobacterium sp. (strain MP5ACTX9) RepID=E8X5Z3_ACISM
Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein {ECO:0000313|EMBL:ADW70877.1}; TaxID=1198114 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicel
aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein
13_1_20cm_4_scaffold_107_7
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

7725..8582
DNA (858bp) protein (286aa)
Xanthine dehydrogenase {ECO:0000313|EMBL:CCH51219.1}; EC=1.17.1.4 {ECO:0000313|EMBL:CCH51219.1};; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;"
alanine dehydrogenase (EC:1.4.1.1)
Xanthine dehydrogenase n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GBE5_9BACT
13_1_20cm_4_scaffold_107_8
Tolypothrix bouteillei, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

8579..9172
DNA (594bp) protein (198aa)
hypothetical protein n=1 Tax=Mastigocladopsis repens RepID=UPI00030A57D9
4-diphosphocytidyl-2C-methyl-D-erythritol synthase {ECO:0000313|EMBL:KIE10105.1}; TaxID=1479485 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix boutei
hypothetical protein
13_1_20cm_4_scaffold_107_9
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(9358..11532)
DNA (2175bp) protein (725aa)
Penicillin-binding protein, 1A family {ECO:0000313|EMBL:EDY21752.1}; EC=2.4.1.129 {ECO:0000313|EMBL:EDY21752.1};; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Ch
peptidoglycan glycosyltransferase (EC:2.4.1.129)
Penicillin-binding protein, 1A family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CWG0_9BACT rbh
13_1_20cm_4_scaffold_107_10
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(11654..11989)
DNA (336bp) protein (112aa)
glutaredoxin n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001746BEC
glutaredoxin; K07390 monothiol glutaredoxin Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
glutaredoxin
13_1_20cm_4_scaffold_107_11
unknown

Not on your lists

12070..12165
DNA (96bp) protein (32aa)

This feature has no annotations

13_1_20cm_4_scaffold_107_12
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(12193..12378)
DNA (186bp) protein (62aa)
CsbD family protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D508_9BACT
CsbD family protein {ECO:0000313|EMBL:EDY18611.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
CsbD-like protein
13_1_20cm_4_scaffold_107_13
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

12579..14120
DNA (1542bp) protein (514aa)
PAS/PAC sensor hybrid histidine kinase {ECO:0000313|EMBL:EDY18580.1}; EC=2.7.13.3 {ECO:0000313|EMBL:EDY18580.1};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" sou
PAS/PAC sensor hybrid histidine kinase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D4X7_9BACT rbh
histidine kinase
13_1_20cm_4_scaffold_107_14
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14450..14623)
DNA (174bp) protein (58aa)
UPF0391 membrane protein Geob_0344 n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=Y344_GEODF
UPF0391 membrane protein Geob_0344 {ECO:0000255|HAMAP-Rule:MF_01361}; TaxID=316067 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geob
hypothetical protein
13_1_20cm_4_scaffold_107_15
GWC2_Geobacteraceae_58_44_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14705..14875
DNA (171bp) protein (57aa)
Uncharacterized protein n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M3T0_GEODF
hypothetical protein Tax=GWC2_Geobacteraceae_58_44_curated
hypothetical protein
13_1_20cm_4_scaffold_107_16
unknown

Not on your lists

comp(14903..15151)
DNA (249bp) protein (83aa)

This feature has no annotations

13_1_20cm_4_scaffold_107_17
GWC2_Geobacteraceae_58_44_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15269..15415
DNA (147bp) protein (49aa)
Putative uncharacterized protein n=1 Tax=Gluconobacter morbifer G707 RepID=G6XIZ5_9PROT
hypothetical protein Tax=GWC2_Geobacteraceae_58_44_curated
conserved exported protein of unknown function
13_1_20cm_4_scaffold_107_18
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(15461..16021)
DNA (561bp) protein (187aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D199_9BACT
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EDY19791.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428
RNA polymerase sigma factor SigK
13_1_20cm_4_scaffold_107_19
unknown

Not on your lists

comp(16503..16883)
DNA (381bp) protein (127aa)

This feature has no annotations

13_1_20cm_4_scaffold_107_20
unknown

Not on your lists

17268..17588
DNA (321bp) protein (107aa)

This feature has no annotations

13_1_20cm_4_scaffold_107_21
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18125..20794
DNA (2670bp) protein (890aa)
MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor {ECO:0000313|EMBL:BAN34776.1}; EC=2.1.1.80 {ECO:0000313|EMBL:BAN34776.1};; EC=3.1.1.61 {ECO:0000313|EMBL:BAN34776.1};; TaxID=1163617
MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor (EC:2.1.1.80 3.1.1.61)
MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AFT6_9PROT
13_1_20cm_4_scaffold_107_22
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

20775..22550
DNA (1776bp) protein (592aa)
putative sensor histidine kinase (EC:2.7.13.3)
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DA10_9BACT
PAS/PAC sensor signal transduction histidine kinase {ECO:0000313|EMBL:EDY16637.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Elli
13_1_20cm_4_scaffold_107_23
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

22689..23387
DNA (699bp) protein (233aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CUU9_9BACT
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:EDY22337.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ell
two component LuxR family transcriptional regulator
13_1_20cm_4_scaffold_107_24
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

23558..24355
DNA (798bp) protein (266aa)
Phage SPO1 DNA polymerase-related protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CUQ5_9BACT
Phage SPO1 DNA polymerase-related protein {ECO:0000313|EMBL:EDY22293.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
Uracil-DNA glycosylase
13_1_20cm_4_scaffold_107_25
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(24412..25221)
DNA (810bp) protein (270aa)
hypothetical protein n=1 Tax=Limnohabitans sp. Rim28 RepID=UPI0002F28C14
Squalene/phytoene synthase {ECO:0000313|EMBL:EDY22294.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
squalene/phytoene synthase
13_1_20cm_4_scaffold_107_26
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(25462..26511)
DNA (1050bp) protein (350aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CW05_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EDY21597.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
13_1_20cm_4_scaffold_107_27
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

26536..27735
DNA (1200bp) protein (400aa)
hemN; Coproporphyrinogen III oxidase or related Fe-S oxidoreductase; K02495 oxygen-independent coproporphyrinogen III oxidase [EC:1.3.99.22] Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
oxygen-independent coproporphyrinogen III oxidase (EC:1.3.99.22)
hypothetical protein n=1 Tax=Rubritalea marina RepID=UPI000362AF1B
13_1_20cm_4_scaffold_107_28
unknown

Not on your lists

comp(28104..28574)
DNA (471bp) protein (157aa)

This feature has no annotations

13_1_20cm_4_scaffold_107_29
Gloeobacter kilaueensis, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

28590..29618
DNA (1029bp) protein (343aa)
Uroporphyrinogen III C-methyltransferase n=1 Tax=Gloeobacter kilaueensis JS1 RepID=U5QG93_9CYAN
Uroporphyrinogen III C-methyltransferase {ECO:0000313|EMBL:AGY56659.1}; TaxID=1183438 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter kilaueensis J
uroporphyrinogen III C-methyltransferase
13_1_20cm_4_scaffold_107_30
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(29720..30022)
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D9U0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY16871.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
Displaying items 1-30 of 50 in total

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