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13_1_20cm_4_scaffold_1115

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Displaying 14 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_1115_1
RBG_19FT_COMBO_Chloroflexi_48_23_curated, Chloroflexi, Bacteria

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3..191
DNA (189bp) protein (63aa)
hpt1; hypoxanthine-guanine phosphoribosyltransferase; K00760 hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] Tax=RBG_19FT_COMBO_Chloroflexi_48_23_curated
Hypoxanthine-guanine phosphoribosyltransferase n=1 Tax=Lactobacillus saerimneri 30a RepID=M5J6X0_9LACO
hypoxanthine phosphoribosyltransferase
13_1_20cm_4_scaffold_1115_2
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

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188..433
DNA (246bp) protein (82aa)
molybdopterin synthase subunit MoaD / molybdopterin synthase subunit MoaE; K03635 molybdopterin synthase catalytic subunit [EC:2.-.-.-] Tax=GWF2_Verrucomicrobia_62_7_curated
Molybdopterin synthase subunit MoaD n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IPZ2_KORVE
molybdopterin synthase subunit MoaD / molybdopterin synthase subunit MoaE
13_1_20cm_4_scaffold_1115_3
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(527..1012)
DNA (486bp) protein (162aa)
UPF0234 protein CfE428DRAFT_0350 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CUI7_9BACT
hypothetical protein; K09767 hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
hypothetical protein
13_1_20cm_4_scaffold_1115_4
Thalassomonas viridans, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1069..1875)
DNA (807bp) protein (269aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ISW0_KORVE
Uncharacterized protein {ECO:0000313|EMBL:KJE47796.1}; TaxID=137584 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="Thalassomonas virid
hypothetical protein
13_1_20cm_4_scaffold_1115_5
unknown

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comp(1856..2155)
DNA (300bp) protein (100aa)

This feature has no annotations

13_1_20cm_4_scaffold_1115_6
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(2294..3829)
DNA (1536bp) protein (512aa)
Mg chelatase, subunit ChlI n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D7Q2_9BACT
Mg chelatase, subunit ChlI {ECO:0000313|EMBL:EDY17542.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
transcriptional regulator
13_1_20cm_4_scaffold_1115_7

Not on your lists

4118..4987
DNA (870bp) protein (290aa)
RNA polymerase sigma factor n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D7Q1_9BACT
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
rpoD; DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)
13_1_20cm_4_scaffold_1115_8
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(5045..6448)
DNA (1404bp) protein (468aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia su
Pyruvate kinase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XHI9_9BACT
pykF; Pyruvate kinase
13_1_20cm_4_scaffold_1115_9
GWC2_Geobacteraceae_58_44_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6599..7033)
DNA (435bp) protein (145aa)
Putative outer membrane protein n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M9A2_GEODF
hypothetical protein; K08995 putative membrane protein Tax=GWC2_Geobacteraceae_58_44_curated
outer membrane protein
13_1_20cm_4_scaffold_1115_10
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(7251..8666)
DNA (1416bp) protein (472aa)
Tetratricopeptide domain protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D3I8_9BACT
Tetratricopeptide domain protein {ECO:0000313|EMBL:EDY18818.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
13_1_20cm_4_scaffold_1115_11
Clostridium sp. CAG:448, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8913..9296
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:448 RepID=R6SQ55_9CLOT
13_1_20cm_4_scaffold_1115_12
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(9389..11221)
DNA (1833bp) protein (611aa)
DNA mismatch repair protein MutS n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D9S2_9BACT
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00039014}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthonioba
DNA mismatch repair protein MutS
13_1_20cm_4_scaffold_1115_13
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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11386..12138
DNA (753bp) protein (251aa)
Putative ABC transporter ATP-binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC93_GEMAT
Putative ABC transporter ATP-binding protein {ECO:0000313|EMBL:BAH40120.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas
putative ABC transporter ATP-binding protein
13_1_20cm_4_scaffold_1115_14
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

12167..14686
DNA (2520bp) protein (840aa)
Permease n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZXY0_OPITP rbh
Permease {ECO:0000313|EMBL:ACB75182.1}; Flags: Precursor;; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / P
permease
Displaying 14 items

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