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13_1_20cm_4_scaffold_1485

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_1485_1

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comp(140..2539)
DNA (2400bp) protein (800aa)
Tetratricopeptide TPR_2 repeat protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01NM4_SOLUE
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49190.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
13_1_20cm_4_scaffold_1485_2
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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2845..4017
DNA (1173bp) protein (391aa)
Putative dipeptidase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A990_GEMAT rbh
Putative dipeptidase {ECO:0000313|EMBL:BAH39067.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27
putative dipeptidase
13_1_20cm_4_scaffold_1485_3
Akkermansia muciniphila CAG:154, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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4068..6341
DNA (2274bp) protein (758aa)
excinuclease ABC subunit B n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001744499
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_0
excinuclease ABC subunit B
13_1_20cm_4_scaffold_1485_4
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(6343..7176)
DNA (834bp) protein (278aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:M
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D1Y4_9BACT
13_1_20cm_4_scaffold_1485_5

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7254..7985
DNA (732bp) protein (244aa)
Orotidine-5'-phosphate decarboxylase (EC:4.1.1.23); K01591 orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] id=16879713 bin=RBG_16_Aminicenantes_63_16_plus species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_16_Aminicenantes_63_16_plus organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate Resolve three similar GC_Cov Aminicentantes bins with ESOM
orotidine 5'-phosphate decarboxylase (EC:4.1.1.23)
Uncharacterized protein {ECO:0000313|EMBL:KKN64595.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
13_1_20cm_4_scaffold_1485_6
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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7985..8641
DNA (657bp) protein (219aa)
Biotin/lipoate A/B protein ligase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CYR1_9BACT
Biotin/lipoate A/B protein ligase {ECO:0000313|EMBL:EDY20602.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
lplA; lipoate-protein ligase A
13_1_20cm_4_scaffold_1485_7
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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8740..9783
DNA (1044bp) protein (348aa)
Polyprenyl synthetase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZH2_9BACT
Polyprenyl synthetase {ECO:0000313|EMBL:EDY20136.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
polyprenyl synthetase
13_1_20cm_4_scaffold_1485_8
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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9819..10118
DNA (300bp) protein (100aa)
DNA repair protein RadC n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZF8_9BACT
DNA repair protein RadC {ECO:0000313|EMBL:EDY20122.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
radC; UPF0758 protein
13_1_20cm_4_scaffold_1485_9
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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10118..10399
DNA (282bp) protein (94aa)
DNA repair protein RadC n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZF8_9BACT
DNA repair protein RadC {ECO:0000313|EMBL:EDY20122.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
DNA replication and repair protein RadC
13_1_20cm_4_scaffold_1485_10
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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10441..11253
DNA (813bp) protein (271aa)
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase {ECO:0000256|SAAS:SAAS00064156}; EC=2.3.1.129 {ECO:0000256|SAAS:SAAS00001267};; TaxID=497964 species="Bacteria; Verrucomicrobia;
Acyl-(Acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZF6_9BACT
lpxA; acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase
13_1_20cm_4_scaffold_1485_11
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(11352..12041)
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DAJ9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY16517.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
13_1_20cm_4_scaffold_1485_12
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(12244..13899)
DNA (1656bp) protein (552aa)
Outer membrane efflux protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DAJ8_9BACT
outer membrane efflux protein Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
transporter
13_1_20cm_4_scaffold_1485_13
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(13996..14181)
DNA (186bp) protein (62aa)
Transcriptional regulator, MarR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DAJ6_9BACT
Transcriptional regulator, MarR family {ECO:0000313|EMBL:EDY16514.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavu
Displaying 13 items

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